mRNA_H-elongata_contig17208.4442.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig17208.4442.1 vs. uniprot
Match: D8LDG6_ECTSI (Kinesin motor domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDG6_ECTSI) HSP 1 Score: 123 bits (309), Expect = 3.940e-31 Identity = 58/70 (82.86%), Postives = 66/70 (94.29%), Query Frame = 1
Query: 10 KQAKDFGFTRVFNSKASQRETYESTMRPLVDDMFACRNALLFAYGMTNAGKTFTVLGEEGFPGLIPQALT 219
+QAKDFGFTRVF+S+A Q ETYESTMRPLVDD+F+ +NALLFAYGMTNAGKT+TVLGE+G PGLIPQALT
Sbjct: 132 RQAKDFGFTRVFSSEAGQVETYESTMRPLVDDVFSAQNALLFAYGMTNAGKTYTVLGEDGSPGLIPQALT 201
BLAST of mRNA_H-elongata_contig17208.4442.1 vs. uniprot
Match: A0A6H5JEB3_9PHAE (Kinesin-like protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEB3_9PHAE) HSP 1 Score: 121 bits (303), Expect = 2.530e-30 Identity = 57/70 (81.43%), Postives = 65/70 (92.86%), Query Frame = 1
Query: 10 KQAKDFGFTRVFNSKASQRETYESTMRPLVDDMFACRNALLFAYGMTNAGKTFTVLGEEGFPGLIPQALT 219
+QAKDFGFTRV +S+A Q ETYESTMRPLVDD+F+ +NALLFAYGMTNAGKT+TVLGE+G PGLIPQALT
Sbjct: 133 RQAKDFGFTRVLSSEAGQVETYESTMRPLVDDVFSAQNALLFAYGMTNAGKTYTVLGEDGSPGLIPQALT 202
BLAST of mRNA_H-elongata_contig17208.4442.1 vs. uniprot
Match: F0XYT0_AURAN (Kinesin motor domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XYT0_AURAN) HSP 1 Score: 79.0 bits (193), Expect = 1.710e-17 Identity = 37/69 (53.62%), Postives = 53/69 (76.81%), Query Frame = 1
Query: 19 KDFGFTRVFNSKASQRETYESTMRPLVDDMFACRNALLFAYGMTNAGKTFTVLGE---EGFPGLIPQAL 216
+D+ FTRVF+ A+Q + YE+T PLVD +FA R+ALLF YG+TNAGK++T++G+ E GL+P+AL
Sbjct: 1 RDYTFTRVFDDAATQADVYEATTAPLVDALFAGRSALLFTYGVTNAGKSYTMMGDPEDEAARGLMPRAL 69
BLAST of mRNA_H-elongata_contig17208.4442.1 vs. uniprot
Match: A0A1A8CSI1_9TELE (Kinesin family member 23 (Fragment) n=1 Tax=Nothobranchius kadleci TaxID=1051664 RepID=A0A1A8CSI1_9TELE) HSP 1 Score: 75.5 bits (184), Expect = 1.950e-15 Identity = 31/64 (48.44%), Postives = 44/64 (68.75%), Query Frame = 1
Query: 25 FGFTRVFNSKASQRETYESTMRPLVDDMFACRNALLFAYGMTNAGKTFTVLGEEGFPGLIPQAL 216
+ FT+VF SQ E +E RPLV+D+ C+N LLF YG+T +GKT+T+ G G GL+P++L
Sbjct: 55 YSFTKVFGINTSQMELFEDVARPLVEDLIQCKNGLLFTYGVTGSGKTYTMTGSPGEGGLLPRSL 118
BLAST of mRNA_H-elongata_contig17208.4442.1 vs. uniprot
Match: H6S4D1_PLAVT (Kinesin (Fragment) n=1 Tax=Plasmopara viticola TaxID=143451 RepID=H6S4D1_PLAVT) HSP 1 Score: 76.3 bits (186), Expect = 2.670e-15 Identity = 32/67 (47.76%), Postives = 49/67 (73.13%), Query Frame = 1
Query: 16 AKDFGFTRVFNSKASQRETYESTMRPLVDDMFACRNALLFAYGMTNAGKTFTVLGEEGFPGLIPQAL 216
A +F F+R+F + Q+E +E+T RP++D F ++ L+FAYG+TN+GKT+TV G PG++PQAL
Sbjct: 118 ATNFHFSRIFRQETQQKELFEATTRPVLDAAFEGKSGLVFAYGVTNSGKTYTVSGSSEAPGVLPQAL 184
BLAST of mRNA_H-elongata_contig17208.4442.1 vs. uniprot
Match: A0A2D0RAZ0_ICTPU (Kinesin-like protein n=8 Tax=Siluroidei TaxID=1489793 RepID=A0A2D0RAZ0_ICTPU) HSP 1 Score: 77.4 bits (189), Expect = 6.540e-15 Identity = 32/68 (47.06%), Postives = 48/68 (70.59%), Query Frame = 1
Query: 13 QAKDFGFTRVFNSKASQRETYESTMRPLVDDMFACRNALLFAYGMTNAGKTFTVLGEEGFPGLIPQAL 216
Q FGFT++F +++Q E ++ T+R V D C+NAL+F+YG+TNAGKT T+ G PG++P+AL
Sbjct: 104 QVHKFGFTKIFGPESTQAEFFDGTIRSQVQDFLQCKNALVFSYGVTNAGKTHTIQGSPKDPGILPRAL 171
BLAST of mRNA_H-elongata_contig17208.4442.1 vs. uniprot
Match: A0A6S8U5N5_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A6S8U5N5_9STRA) HSP 1 Score: 77.0 bits (188), Expect = 8.940e-15 Identity = 35/72 (48.61%), Postives = 53/72 (73.61%), Query Frame = 1
Query: 10 KQAKDFGFTRVFNSKASQRETYESTMRPLVDDMFACRNALLFAYGMTNAGKTFTVLG---EEGFPGLIPQAL 216
++A+D+ F RVF++ A+Q E YE T PLVD +F R+ALLF YG+TNAGK++T++G + GL+P++L
Sbjct: 119 REARDYTFARVFDAAATQNEVYERTTAPLVDGLFGGRSALLFTYGVTNAGKSYTMMGSPEDNDTAGLLPRSL 190
BLAST of mRNA_H-elongata_contig17208.4442.1 vs. uniprot
Match: A0A662YGT2_9STRA (Kinesin motor domain-containing protein (Fragment) n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YGT2_9STRA) HSP 1 Score: 75.5 bits (184), Expect = 1.120e-14 Identity = 32/67 (47.76%), Postives = 48/67 (71.64%), Query Frame = 1
Query: 16 AKDFGFTRVFNSKASQRETYESTMRPLVDDMFACRNALLFAYGMTNAGKTFTVLGEEGFPGLIPQAL 216
A F F+R+F QR+ +E+T RP++D FA ++ L+FAYG+TN+GKT+T+ G PG++PQAL
Sbjct: 125 ATSFHFSRIFRPDTEQRDLFEATTRPVLDAAFAGKSGLVFAYGVTNSGKTYTISGTGDAPGVLPQAL 191
BLAST of mRNA_H-elongata_contig17208.4442.1 vs. uniprot
Match: A0A4D9CZ51_9STRA (Kinesin-like protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CZ51_9STRA) HSP 1 Score: 76.6 bits (187), Expect = 1.220e-14 Identity = 33/68 (48.53%), Postives = 49/68 (72.06%), Query Frame = 1
Query: 13 QAKDFGFTRVFNSKASQRETYESTMRPLVDDMFACRNALLFAYGMTNAGKTFTVLGEEGFPGLIPQAL 216
Q ++F F RV + Q E Y T +PLVD ++ ++ LLFAYG+TNAGKT+T++G+EG G++P+AL
Sbjct: 126 QVREFTFHRVLGPECRQEEVYRQTAQPLVDALWMGQSGLLFAYGVTNAGKTYTIMGKEGDAGVLPRAL 193
BLAST of mRNA_H-elongata_contig17208.4442.1 vs. uniprot
Match: UPI001939B508 (kinesin-like protein KIF20B isoform X1 n=2 Tax=Styela clava TaxID=7725 RepID=UPI001939B508) HSP 1 Score: 76.6 bits (187), Expect = 1.240e-14 Identity = 33/64 (51.56%), Postives = 44/64 (68.75%), Query Frame = 1
Query: 25 FGFTRVFNSKASQRETYESTMRPLVDDMFACRNALLFAYGMTNAGKTFTVLGEEGFPGLIPQAL 216
F FT++F+ SQ+E Y T PLV D NAL+F YG+TNAGKT+T+ G +G G+IPQA+
Sbjct: 117 FTFTKIFDQATSQKEFYRETSHPLVQDFIDGNNALIFTYGVTNAGKTYTLQGSQGNEGIIPQAI 180 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig17208.4442.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig17208.4442.1 >prot_H-elongata_contig17208.4442.1 ID=prot_H-elongata_contig17208.4442.1|Name=mRNA_H-elongata_contig17208.4442.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=74bp FNEKQAKDFGFTRVFNSKASQRETYESTMRPLVDDMFACRNALLFAYGMTback to top mRNA from alignment at H-elongata_contig17208:6476..6697+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig17208.4442.1 ID=mRNA_H-elongata_contig17208.4442.1|Name=mRNA_H-elongata_contig17208.4442.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=222bp|location=Sequence derived from alignment at H-elongata_contig17208:6476..6697+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig17208:6476..6697+ >mRNA_H-elongata_contig17208.4442.1 ID=mRNA_H-elongata_contig17208.4442.1|Name=mRNA_H-elongata_contig17208.4442.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=444bp|location=Sequence derived from alignment at H-elongata_contig17208:6476..6697+ (Himanthalia elongata Himel1 dioecious)back to top |