mRNA_H-elongata_contig172070.4441.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig172070.4441.1 vs. uniprot
Match: UPI0009E5F5BB (pathogen-related protein-like isoform X2 n=2 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E5F5BB) HSP 1 Score: 70.5 bits (171), Expect = 3.420e-13 Identity = 32/56 (57.14%), Postives = 39/56 (69.64%), Query Frame = 1
Query: 49 RDYVPMDGVEWRYGSPPDYEKVNTAYFEGRTKTHPHGSLESIVQQAVKNWEVESHH 216
R Y+ G++WR G P DY KVN AY EGRT+TH GSLE IV+ VK WE+E+ H
Sbjct: 11 RQYMDEPGIQWREGKP-DYTKVNKAYLEGRTRTHNEGSLEKIVEDLVKTWEMEAFH 65
BLAST of mRNA_H-elongata_contig172070.4441.1 vs. uniprot
Match: UPI001E1E12C9 (pathogen-related protein-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1E12C9) HSP 1 Score: 70.1 bits (170), Expect = 5.710e-13 Identity = 33/62 (53.23%), Postives = 39/62 (62.90%), Query Frame = 1
Query: 37 GEII--RDYVPMDGVEWRYGSPPDYEKVNTAYFEGRTKTHPHGSLESIVQQAVKNWEVESHH 216
GEI+ R Y+ + WRYGS PDY KVN + RTK H GSLE IV+ VK WE+ES H
Sbjct: 5 GEILPKRAYMDNPDINWRYGSKPDYRKVNEIFMRERTKVHTEGSLEKIVEDLVKTWEMESSH 66
BLAST of mRNA_H-elongata_contig172070.4441.1 vs. uniprot
Match: K7LWH8_SOYBN (Uncharacterized protein n=2 Tax=Glycine subgen. Soja TaxID=1462606 RepID=K7LWH8_SOYBN) HSP 1 Score: 65.5 bits (158), Expect = 1.790e-12 Identity = 28/50 (56.00%), Postives = 35/50 (70.00%), Query Frame = 1
Query: 67 DGVEWRYGSPPDYEKVNTAYFEGRTKTHPHGSLESIVQQAVKNWEVESHH 216
D ++WR+G PP YE VN + E RTK P GSLE IVQ A+K+WE+ S H
Sbjct: 15 DNIQWRHGGPPTYEAVNKLFEERRTKEWPEGSLEEIVQNAIKSWEIWSFH 64
BLAST of mRNA_H-elongata_contig172070.4441.1 vs. uniprot
Match: A0A7N2MAL1_QUELO (Uncharacterized protein n=3 Tax=Fagaceae TaxID=3503 RepID=A0A7N2MAL1_QUELO) HSP 1 Score: 68.6 bits (166), Expect = 2.880e-12 Identity = 30/54 (55.56%), Postives = 37/54 (68.52%), Query Frame = 1
Query: 55 YVPMDGVEWRYGSPPDYEKVNTAYFEGRTKTHPHGSLESIVQQAVKNWEVESHH 216
Y D +EWR+G PP Y+ VN + +GRTK P GSLE IVQ AVK+WE+E H
Sbjct: 21 YDEADDIEWRHGGPPTYDDVNRLFEDGRTKEWPKGSLEEIVQNAVKSWEMELSH 74
BLAST of mRNA_H-elongata_contig172070.4441.1 vs. uniprot
Match: A0A812USP2_9DINO (Hypothetical protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812USP2_9DINO) HSP 1 Score: 69.3 bits (168), Expect = 3.390e-12 Identity = 29/59 (49.15%), Postives = 38/59 (64.41%), Query Frame = 1
Query: 40 EIIRDYVPMDGVEWRYGSPPDYEKVNTAYFEGRTKTHPHGSLESIVQQAVKNWEVESHH 216
E R ++ +G++WRYG PDY N Y +G+TK HP GSLE IV+ VK WE+E H
Sbjct: 109 EPERAHMDEEGIKWRYGGKPDYSLTNLLYLKGKTKNHPEGSLELIVENLVKTWEMERSH 167
BLAST of mRNA_H-elongata_contig172070.4441.1 vs. uniprot
Match: A0A812LD63_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812LD63_9DINO) HSP 1 Score: 69.3 bits (168), Expect = 3.530e-12 Identity = 29/59 (49.15%), Postives = 38/59 (64.41%), Query Frame = 1
Query: 40 EIIRDYVPMDGVEWRYGSPPDYEKVNTAYFEGRTKTHPHGSLESIVQQAVKNWEVESHH 216
E R ++ +G++WRYG PDY N Y +G+TK HP GSLE IV+ VK WE+E H
Sbjct: 116 EPERAHMDEEGIKWRYGGKPDYSLTNLLYLKGKTKNHPEGSLELIVENLVKTWEMERSH 174
BLAST of mRNA_H-elongata_contig172070.4441.1 vs. uniprot
Match: UPI001E1E0B45 (pathogen-related protein-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1E0B45) HSP 1 Score: 67.0 bits (162), Expect = 8.460e-12 Identity = 28/56 (50.00%), Postives = 37/56 (66.07%), Query Frame = 1
Query: 49 RDYVPMDGVEWRYGSPPDYEKVNTAYFEGRTKTHPHGSLESIVQQAVKNWEVESHH 216
R ++ + ++WR+GS PDY VN + GRTK H GSLE IV+ VK WE+ES H
Sbjct: 11 RAFMDIPDIKWRHGSKPDYSTVNEVFMRGRTKVHNEGSLEKIVEDLVKTWEMESSH 66
BLAST of mRNA_H-elongata_contig172070.4441.1 vs. uniprot
Match: A0A2P5DQW0_PARAD (NTF2-like domain containing protein n=2 Tax=Cannabaceae TaxID=3481 RepID=A0A2P5DQW0_PARAD) HSP 1 Score: 67.4 bits (163), Expect = 8.620e-12 Identity = 30/63 (47.62%), Postives = 43/63 (68.25%), Query Frame = 1
Query: 40 EIIRD----YVPMDGVEWRYGSPPDYEKVNTAYFEGRTKTHPHGSLESIVQQAVKNWEVESHH 216
+++RD ++ + EWR+G+PP Y+ VN + +GRTK P GSLE IVQ AVK+WE+E H
Sbjct: 12 KVVRDKYRSFLDDENTEWRHGAPPTYDSVNHLFEQGRTKEWPKGSLEEIVQNAVKSWEMELSH 74
BLAST of mRNA_H-elongata_contig172070.4441.1 vs. uniprot
Match: A0A8K0IU21_COCNU (Putative Pathogen-related protein n=1 Tax=Cocos nucifera TaxID=13894 RepID=A0A8K0IU21_COCNU) HSP 1 Score: 66.6 bits (161), Expect = 1.010e-11 Identity = 31/62 (50.00%), Postives = 40/62 (64.52%), Query Frame = 1
Query: 37 GEIIRDYVPMDG--VEWRYGSPPDYEKVNTAYFEGRTKTHPHGSLESIVQQAVKNWEVESHH 216
G+ R Y+ +G WR+GSPP Y+ VN + EGRTK P GSLE +VQ A+K WE+E H
Sbjct: 13 GDKYRSYLGGEGDDTHWRHGSPPTYDIVNKLFEEGRTKVWPKGSLEEVVQNAIKTWEMELSH 74
BLAST of mRNA_H-elongata_contig172070.4441.1 vs. uniprot
Match: C6TCW2_SOYBN (Uncharacterized protein n=1 Tax=Glycine max TaxID=3847 RepID=C6TCW2_SOYBN) HSP 1 Score: 64.7 bits (156), Expect = 1.130e-11 Identity = 28/50 (56.00%), Postives = 35/50 (70.00%), Query Frame = 1
Query: 67 DGVEWRYGSPPDYEKVNTAYFEGRTKTHPHGSLESIVQQAVKNWEVESHH 216
D V+WR+G PP Y+ VN + EGRTK GSLE IVQ A+K+WE+E H
Sbjct: 15 DNVQWRHGGPPTYDAVNKLFGEGRTKEWTEGSLEEIVQNAIKSWEMELSH 64 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig172070.4441.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig172070.4441.1 >prot_H-elongata_contig172070.4441.1 ID=prot_H-elongata_contig172070.4441.1|Name=mRNA_H-elongata_contig172070.4441.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=73bp MNGLSDSSKGRDGEIIRDYVPMDGVEWRYGSPPDYEKVNTAYFEGRTKTHback to top mRNA from alignment at H-elongata_contig172070:639..857- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig172070.4441.1 ID=mRNA_H-elongata_contig172070.4441.1|Name=mRNA_H-elongata_contig172070.4441.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=219bp|location=Sequence derived from alignment at H-elongata_contig172070:639..857- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig172070:639..857- >mRNA_H-elongata_contig172070.4441.1 ID=mRNA_H-elongata_contig172070.4441.1|Name=mRNA_H-elongata_contig172070.4441.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=438bp|location=Sequence derived from alignment at H-elongata_contig172070:639..857- (Himanthalia elongata Himel1 dioecious)back to top |