prot_H-elongata_contig105342.443.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig105342.443.1
Unique Nameprot_H-elongata_contig105342.443.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length350
Homology
BLAST of mRNA_H-elongata_contig105342.443.1 vs. uniprot
Match: D7G201_ECTSI (Sel1 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G201_ECTSI)

HSP 1 Score: 276 bits (705), Expect = 6.120e-81
Identity = 202/380 (53.16%), Postives = 244/380 (64.21%), Query Frame = 0
Query:    1 YFFGRGERLSLKKAFDAYSWAAGHGAVEAMVALASMYKAGT-HVEANKEKCYFWLERAVDKGYPPAMNELAVVLLGEADHLEGTHPELKSSTL--------PTEG---------------HETGNSDEDAELIQQMHEEAPGLSGRDRP---EAGPEDDYQESRGDRKRGEVAGWTPEQDRLFEQVMEKRKQAMRLLQEAAKTGFTDAMTNLGNMQEAMGYFDDAQNWYSMAAEPSESANNPRAQNYLGMLYFEGRGVTKDLDEAVKWFRRSAQQGNAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAYALARDALHSFAAAARQAP---------ACIHDTGLKIEDSSQGIMKPGDSSSELSRQV 344
            +FFGRGE  ++ KAF+AY+WAA  G  EAM  +A MY+ G+  V+A+ E+C  WLERAVDKGY PAMN+LA  LL +AD  E  HPELK+           PT+                H +G S+E                        + G + + +E        + +   PE  +LFEQVMEKRK++M+LLQ+AAKTG T+AMTNLGNMQEAMGYF+DA++WYS+AA PSESANNPRAQNYLG L++EGRGVTKD DEAVKWFR SA+QG  Q  XXXXXXXXXXXXXXXXXXXXXXXXXXXX          LAY LARDALH+ AAAARQAP         A +  TGL+ ED S+GIMKP   SS+ S + 
Sbjct:  405 FFFGRGENPNMSKAFEAYAWAAERGCAEAMYMMAWMYRVGSGSVDADAEQCQRWLERAVDKGYAPAMNDLATTLLEQADRTERAHPELKADVAAADVIADSPTDDADRGLGATRPPTPDDHTSGGSEEXXXXXXXXXXXXXXXXXXXXXXXXDGGRQVEAEE--------DASSLPPELAQLFEQVMEKRKRSMQLLQDAAKTGHTEAMTNLGNMQEAMGYFEDARSWYSLAAHPSESANNPRAQNYLGTLFYEGRGVTKDRDEAVKWFRLSARQGFPQACXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGGSISATNSLAYLLARDALHALAAAARQAPPGLDQRNLSAGVAGTGLQFEDPSRGIMKPAGLSSQASSKA 776          
BLAST of mRNA_H-elongata_contig105342.443.1 vs. uniprot
Match: A0A836CC33_9STRA (MYND-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC33_9STRA)

HSP 1 Score: 128 bits (322), Expect = 6.310e-29
Identity = 96/285 (33.68%), Postives = 134/285 (47.02%), Query Frame = 0
Query:    1 YFFGRGERLSLKKAFDAYSWAAGHGAVEAMVALASMYKAGTHVEANKEKCYFWLERAVDKGYPPAMNELAVVLLGEADHLEGTHPELKSS-----TLPTEGHETGNSDEDAELIQQMHEEAPGLSGRDRPEAGPED---DYQESRGDRKRGEVAGWTPEQDRLFEQVMEKRKQAMRLLQE-------------------------AAKTGFTDAMTNLGNMQEAMGYFDDAQNWYSMAAEPSES-ANNPRAQNYLGMLYFEGRGVTKDLDEAVKWFRRSAQQGNA 251
            +++GR    + +KA  AY WAA  G  EA   LA MYK G  V A+ E+C  WLERAV++GY PAMNELA++LL EA+ +    PE++++     +   +    G+                             D       + G  +R      +PE    F    E RK+A  LLQ                          AA+ G  DAM +LG++ E  G    A+ WY +AA P +  ANN RAQN+LG +Y  GRG  +D  EA +WF+R+A+QG A
Sbjct:  488 WYYGREGPPNFEKAHAAYLWAAERGFGEAQYMLAWMYKHGHFVTADAERCTHWLERAVERGYAPAMNELALLLLEEAEGISAAWPEVQAAFDELASKAADADAAGDXXXXXXXXXXXXXXXXXXXXXXXXXXXARDVRGSAAAALGATQRRLQRTLSPEAAAKFAAAAELRKRAQSLLQRVRLCVRREVRCVRQLCAAAVPAAVSAARLGHADAMASLGSLLEEAGRVRAARRWYELAAAPGDGGANNARAQNFLGRMYHSGRGAARDPREAARWFKRAAKQGLA 772          
BLAST of mRNA_H-elongata_contig105342.443.1 vs. uniprot
Match: A0A3E0X448_9GAMM (Uncharacterized protein n=1 Tax=Alkalilimnicola ehrlichii TaxID=351052 RepID=A0A3E0X448_9GAMM)

HSP 1 Score: 55.1 bits (131), Expect = 2.490e-6
Identity = 26/47 (55.32%), Postives = 33/47 (70.21%), Query Frame = 0
Query:  204 MAAEPSESANNPRAQNYLGMLYFEGRGVTKDLDEAVKWFRRSAQQGN 250
            M AE  E   NP AQ  LG +YF G+GV  DLDEA++W RR+A+QG+
Sbjct:    1 MRAEAQEG--NPDAQYALGYMYFNGQGVEPDLDEAMEWIRRAAEQGH 45          
BLAST of mRNA_H-elongata_contig105342.443.1 vs. uniprot
Match: A0A432QW27_9PROT (Beta-lactamase n=1 Tax=Hydrogenimonas sp. TaxID=2231112 RepID=A0A432QW27_9PROT)

HSP 1 Score: 55.1 bits (131), Expect = 3.120e-6
Identity = 22/37 (59.46%), Postives = 30/37 (81.08%), Query Frame = 0
Query:  214 NPRAQNYLGMLYFEGRGVTKDLDEAVKWFRRSAQQGN 250
            NP AQ YLGMLY+EG GV KD++ A  WF+++A+QG+
Sbjct:   33 NPEAQYYLGMLYYEGFGVEKDIETAKYWFKKAARQGS 69          
BLAST of mRNA_H-elongata_contig105342.443.1 vs. uniprot
Match: A0A7C4L760_9SPIR (Sel1 repeat family protein n=1 Tax=Spirochaetes bacterium TaxID=2202144 RepID=A0A7C4L760_9SPIR)

HSP 1 Score: 58.5 bits (140), Expect = 5.330e-6
Identity = 25/40 (62.50%), Postives = 32/40 (80.00%), Query Frame = 0
Query:  211 SANNPRAQNYLGMLYFEGRGVTKDLDEAVKWFRRSAQQGN 250
            S+ +P AQN LG+ YF G GV KDL+EAV+WFR+SA+Q N
Sbjct:   36 SSGDPEAQNSLGVNYFYGDGVEKDLEEAVRWFRKSAEQNN 75          
BLAST of mRNA_H-elongata_contig105342.443.1 vs. uniprot
Match: A0A800MBT7_9BACT (Uncharacterized protein n=1 Tax=Verrucomicrobiales bacterium TaxID=2026801 RepID=A0A800MBT7_9BACT)

HSP 1 Score: 53.5 bits (127), Expect = 6.020e-6
Identity = 23/39 (58.97%), Postives = 29/39 (74.36%), Query Frame = 0
Query:  212 ANNPRAQNYLGMLYFEGRGVTKDLDEAVKWFRRSAQQGN 250
            A +  AQ +LG  Y +G GV KDLDEA+KW R+SA+QGN
Sbjct:   14 AGDASAQLFLGQSYQKGSGVEKDLDEAIKWLRKSAEQGN 52          
BLAST of mRNA_H-elongata_contig105342.443.1 vs. uniprot
Match: A0A7X1SRF7_9PROT (Uncharacterized protein n=2 Tax=Gluconobacter aidae TaxID=2662454 RepID=A0A7X1SRF7_9PROT)

HSP 1 Score: 58.5 bits (140), Expect = 7.130e-6
Identity = 33/95 (34.74%), Postives = 54/95 (56.84%), Query Frame = 0
Query:  158 QVMEKRKQAMRLLQEAAKTGFTDAMTNLGNMQEAMGYFDDAQNWYSMAAEPSESANNPRAQNYLGMLYFEGRGVTKDLDEAVKWFRRSAQQGNAQ 252
            Q  E+R++A+  +Q+A+  G  +A   LG + E  G  D     Y M A    + N+P AQ  +G+ Y++GRGV +D+ +A  W R++AQ G  +
Sbjct:  226 QTPEERRKAVAFIQQASTDGLPEAELMLGTILEYEGGKDAQAFGYFMKAA---TQNHPAAQMKVGVAYYQGRGVERDVSKAETWLRKAAQGGEIE 317          
BLAST of mRNA_H-elongata_contig105342.443.1 vs. uniprot
Match: A0A2A6JME5_9HYPH (Uncharacterized protein n=3 Tax=Rhizobium TaxID=379 RepID=A0A2A6JME5_9HYPH)

HSP 1 Score: 55.5 bits (132), Expect = 1.350e-5
Identity = 23/42 (54.76%), Postives = 32/42 (76.19%), Query Frame = 0
Query:  207 EPSESANNPRAQNYLGMLYFEGRGVTKDLDEAVKWFRRSAQQ 248
            +P  +A +P+AQ  LG L+  GRGVTKD D+AV WFR++A+Q
Sbjct:   47 QPQAAAGDPQAQTALGSLFASGRGVTKDDDQAVAWFRKAAEQ 88          
BLAST of mRNA_H-elongata_contig105342.443.1 vs. uniprot
Match: A0A522AKJ3_9BACT (Sel1 repeat family protein (Fragment) n=1 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=A0A522AKJ3_9BACT)

HSP 1 Score: 52.4 bits (124), Expect = 2.080e-5
Identity = 21/38 (55.26%), Postives = 31/38 (81.58%), Query Frame = 0
Query:  211 SANNPRAQNYLGMLYFEGRGVTKDLDEAVKWFRRSAQQ 248
            ++ +P+AQ Y+G+ Y  G+GV +D +EAVKWFRRSA+Q
Sbjct:   19 ASGDPQAQCYMGVCYQNGQGVQQDYNEAVKWFRRSAEQ 56          
BLAST of mRNA_H-elongata_contig105342.443.1 vs. uniprot
Match: A0L961_MAGMM (Sel1 domain protein repeat-containing protein n=2 Tax=Magnetococcus TaxID=162171 RepID=A0L961_MAGMM)

HSP 1 Score: 57.0 bits (136), Expect = 3.280e-5
Identity = 25/39 (64.10%), Postives = 31/39 (79.49%), Query Frame = 0
Query:  214 NPRAQNYLGMLYFEGRGVTKDLDEAVKWFRRSAQQGNAQ 252
            NP  Q  LG++Y +G+GVTKD  EAVKWFR+SA+QG AQ
Sbjct:  305 NPSVQFNLGVMYDKGQGVTKDAKEAVKWFRKSAEQGYAQ 343          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig105342.443.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
D7G201_ECTSI6.120e-8153.16Sel1 domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A836CC33_9STRA6.310e-2933.68MYND-type domain-containing protein n=1 Tax=Tribon... [more]
A0A3E0X448_9GAMM2.490e-655.32Uncharacterized protein n=1 Tax=Alkalilimnicola eh... [more]
A0A432QW27_9PROT3.120e-659.46Beta-lactamase n=1 Tax=Hydrogenimonas sp. TaxID=22... [more]
A0A7C4L760_9SPIR5.330e-662.50Sel1 repeat family protein n=1 Tax=Spirochaetes ba... [more]
A0A800MBT7_9BACT6.020e-658.97Uncharacterized protein n=1 Tax=Verrucomicrobiales... [more]
A0A7X1SRF7_9PROT7.130e-634.74Uncharacterized protein n=2 Tax=Gluconobacter aida... [more]
A0A2A6JME5_9HYPH1.350e-554.76Uncharacterized protein n=3 Tax=Rhizobium TaxID=37... [more]
A0A522AKJ3_9BACT2.080e-555.26Sel1 repeat family protein (Fragment) n=1 Tax=Verr... [more]
A0L961_MAGMM3.280e-564.10Sel1 domain protein repeat-containing protein n=2 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006597Sel1-like repeatSMARTSM00671sel1coord: 215..250
e-value: 6.2E-12
score: 55.6
coord: 179..210
e-value: 330.0
score: 0.4
coord: 251..286
e-value: 7.0E-10
score: 48.8
coord: 27..62
e-value: 6.6E-6
score: 35.6
IPR006597Sel1-like repeatPFAMPF08238Sel1coord: 251..286
e-value: 4.1E-7
score: 30.4
coord: 215..250
e-value: 1.4E-10
score: 41.5
coord: 28..62
e-value: 4.3E-6
score: 27.2
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 152..332
e-value: 1.8E-40
score: 140.8
coord: 1..91
e-value: 1.6E-13
score: 52.4
NoneNo IPR availablePANTHERPTHR11102SEL-1-LIKE PROTEINcoord: 12..298
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 160..301
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 1..75

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig105342contigH-elongata_contig105342:193..1960 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig105342.443.1mRNA_H-elongata_contig105342.443.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig105342 193..1960 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig105342.443.1 ID=prot_H-elongata_contig105342.443.1|Name=mRNA_H-elongata_contig105342.443.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=350bp
YFFGRGERLSLKKAFDAYSWAAGHGAVEAMVALASMYKAGTHVEANKEKC
YFWLERAVDKGYPPAMNELAVVLLGEADHLEGTHPELKSSTLPTEGHETG
NSDEDAELIQQMHEEAPGLSGRDRPEAGPEDDYQESRGDRKRGEVAGWTP
EQDRLFEQVMEKRKQAMRLLQEAAKTGFTDAMTNLGNMQEAMGYFDDAQN
WYSMAAEPSESANNPRAQNYLGMLYFEGRGVTKDLDEAVKWFRRSAQQGN
AQACKNLGVCYQEGLGVTKDKSKALNLFRQAVERGSVSATNNLAYALARD
ALHSFAAAARQAPACIHDTGLKIEDSSQGIMKPGDSSSELSRQVNPDVE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006597Sel1-like
IPR011990TPR-like_helical_dom_sf