prot_H-elongata_contig172022.4434.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig172022.4434.1
Unique Nameprot_H-elongata_contig172022.4434.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length48
Homology
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BLAST of mRNA_H-elongata_contig172022.4434.1 vs. uniprot
Match: D7FHQ4_ECTSI (Myb_DNA-bind_7 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHQ4_ECTSI)

HSP 1 Score: 64.7 bits (156), Expect = 6.400e-11
Identity = 31/48 (64.58%), Postives = 36/48 (75.00%), Query Frame = 0 
Query:    1 ILEGPNSLDDDNREEVDEDSRTTATRNSFINREMAKRWMPADTIKFYR 48
            I+EG + +DD+NREEVDED  T AT +SF NRE A RW P D IKFYR
Sbjct:  228 IVEGASGIDDENREEVDEDETTAATASSFTNRETAMRWKPHDIIKFYR 275
[Close]
BLAST of mRNA_H-elongata_contig172022.4434.1 vs. uniprot
Match: A0A6H5JYP4_9PHAE (Myb_DNA-bind_7 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYP4_9PHAE)

HSP 1 Score: 62.8 bits (151), Expect = 3.060e-10
Identity = 30/48 (62.50%), Postives = 35/48 (72.92%), Query Frame = 0 
Query:    1 ILEGPNSLDDDNREEVDEDSRTTATRNSFINREMAKRWMPADTIKFYR 48
            I+EG + +DD+NREEVDED  T AT +SF NRE   RW P D IKFYR
Sbjct:  584 IVEGASGIDDENREEVDEDETTAATASSFTNRETPMRWKPHDIIKFYR 631
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig172022.4434.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FHQ4_ECTSI6.400e-1164.58Myb_DNA-bind_7 domain-containing protein n=1 Tax=E... [more]
A0A6H5JYP4_9PHAE3.060e-1062.50Myb_DNA-bind_7 domain-containing protein n=1 Tax=E... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig172022contigH-elongata_contig172022:523..666 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig172022.4434.1mRNA_H-elongata_contig172022.4434.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig172022 523..666 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig172022.4434.1 ID=prot_H-elongata_contig172022.4434.1|Name=mRNA_H-elongata_contig172022.4434.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=48bp
ILEGPNSLDDDNREEVDEDSRTTATRNSFINREMAKRWMPADTIKFYR
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