prot_H-elongata_contig171837.4426.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig171837.4426.1 vs. uniprot
Match: A0A836CL42_9STRA (Ribosomal protein L17 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CL42_9STRA) HSP 1 Score: 88.6 bits (218), Expect = 4.870e-21 Identity = 39/47 (82.98%), Postives = 42/47 (89.36%), Query Frame = 0
Query: 1 MYDKKLVHALFESGAERYGDRNGGYCRVLHTMPRKGDNAKMAVIELV 47
MYDK LVHALFE ERYG+RNGGYCRVL TMPR+GDNAKMA+IELV
Sbjct: 119 MYDKALVHALFEQAPERYGERNGGYCRVLKTMPRQGDNAKMAIIELV 165
BLAST of mRNA_H-elongata_contig171837.4426.1 vs. uniprot
Match: Q15GA8_RHDSA (Chloroplast 50S ribosomal protein 17 (Fragment) n=1 Tax=Rhodomonas salina TaxID=52970 RepID=Q15GA8_RHDSA) HSP 1 Score: 85.5 bits (210), Expect = 1.060e-20 Identity = 38/47 (80.85%), Postives = 40/47 (85.11%), Query Frame = 0
Query: 1 MYDKKLVHALFESGAERYGDRNGGYCRVLHTMPRKGDNAKMAVIELV 47
MYDK+LVHALFE ERY +R GGYCRVL TMPRKGDNAKM VIELV
Sbjct: 42 MYDKQLVHALFEQAPERYAEREGGYCRVLRTMPRKGDNAKMGVIELV 88
BLAST of mRNA_H-elongata_contig171837.4426.1 vs. uniprot
Match: A0A7S0CE24_9STRA (Hypothetical protein n=2 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CE24_9STRA) HSP 1 Score: 85.5 bits (210), Expect = 8.600e-20 Identity = 37/47 (78.72%), Postives = 42/47 (89.36%), Query Frame = 0
Query: 1 MYDKKLVHALFESGAERYGDRNGGYCRVLHTMPRKGDNAKMAVIELV 47
+YDK LVHALF++ +RYGDR GGYCRVL TMPR+GDNAKMAVIELV
Sbjct: 123 VYDKNLVHALFDAAPDRYGDREGGYCRVLRTMPRQGDNAKMAVIELV 169
BLAST of mRNA_H-elongata_contig171837.4426.1 vs. uniprot
Match: Q5K251_GUITH (50S ribosomal protein L17 n=2 Tax=Guillardia theta TaxID=55529 RepID=Q5K251_GUITH) HSP 1 Score: 85.1 bits (209), Expect = 8.920e-20 Identity = 36/47 (76.60%), Postives = 41/47 (87.23%), Query Frame = 0
Query: 1 MYDKKLVHALFESGAERYGDRNGGYCRVLHTMPRKGDNAKMAVIELV 47
MYDK+LVHALFE ERY +RNGGYCRVL T+PRKGDN+KM +IELV
Sbjct: 110 MYDKQLVHALFEQAPERYSERNGGYCRVLQTLPRKGDNSKMGIIELV 156
BLAST of mRNA_H-elongata_contig171837.4426.1 vs. uniprot
Match: A0A1X6PCU2_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PCU2_PORUM) HSP 1 Score: 85.5 bits (210), Expect = 1.010e-19 Identity = 36/47 (76.60%), Postives = 43/47 (91.49%), Query Frame = 0
Query: 1 MYDKKLVHALFESGAERYGDRNGGYCRVLHTMPRKGDNAKMAVIELV 47
++DK LVH+LFE+ ERYG+RNGGYCRVL TMPR+GDNAKMA+IELV
Sbjct: 130 IFDKPLVHSLFEAAPERYGERNGGYCRVLRTMPRRGDNAKMAIIELV 176
BLAST of mRNA_H-elongata_contig171837.4426.1 vs. uniprot
Match: A0A7S1C082_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1C082_9STRA) HSP 1 Score: 85.1 bits (209), Expect = 1.130e-19 Identity = 39/47 (82.98%), Postives = 42/47 (89.36%), Query Frame = 0
Query: 1 MYDKKLVHALFESGAERYGDRNGGYCRVLHTMPRKGDNAKMAVIELV 47
MYDK+LVHALFE+ ERY DRNGGY RVL TMPR+GDNAKMAVIELV
Sbjct: 120 MYDKQLVHALFEAAPERYEDRNGGYTRVLRTMPRQGDNAKMAVIELV 166
BLAST of mRNA_H-elongata_contig171837.4426.1 vs. uniprot
Match: M2W5B3_GALSU (50S ribosomal protein L17 (Plastid) n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2W5B3_GALSU) HSP 1 Score: 85.1 bits (209), Expect = 1.600e-19 Identity = 37/47 (78.72%), Postives = 41/47 (87.23%), Query Frame = 0
Query: 1 MYDKKLVHALFESGAERYGDRNGGYCRVLHTMPRKGDNAKMAVIELV 47
+YDK+LVHALFE ERY DRNGGY R+LHTMPRKGDNA+M VIELV
Sbjct: 135 IYDKQLVHALFEQAPERYADRNGGYTRILHTMPRKGDNAEMGVIELV 181
BLAST of mRNA_H-elongata_contig171837.4426.1 vs. uniprot
Match: D7G590_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G590_ECTSI) HSP 1 Score: 85.1 bits (209), Expect = 1.600e-19 Identity = 37/47 (78.72%), Postives = 43/47 (91.49%), Query Frame = 0
Query: 1 MYDKKLVHALFESGAERYGDRNGGYCRVLHTMPRKGDNAKMAVIELV 47
+YDK+LVHALFESGAERYG+R GGY R++ T PRKGDNAKMA+IELV
Sbjct: 135 IYDKQLVHALFESGAERYGERPGGYTRIIRTTPRKGDNAKMAIIELV 181
BLAST of mRNA_H-elongata_contig171837.4426.1 vs. uniprot
Match: B8CAZ9_THAPS (RK17, ribosomal protein 17 50S large ribosomal subunit, chloroplast n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CAZ9_THAPS) HSP 1 Score: 83.2 bits (204), Expect = 1.840e-19 Identity = 37/47 (78.72%), Postives = 42/47 (89.36%), Query Frame = 0
Query: 1 MYDKKLVHALFESGAERYGDRNGGYCRVLHTMPRKGDNAKMAVIELV 47
+YDK LVH+LFE+ ERYG+RNGGY RVL TMPR+GDNAKMAVIELV
Sbjct: 70 VYDKDLVHSLFEAAPERYGERNGGYTRVLRTMPRQGDNAKMAVIELV 116
BLAST of mRNA_H-elongata_contig171837.4426.1 vs. uniprot
Match: A0A7S2CVF2_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CVF2_9STRA) HSP 1 Score: 84.0 bits (206), Expect = 2.780e-19 Identity = 36/47 (76.60%), Postives = 41/47 (87.23%), Query Frame = 0
Query: 1 MYDKKLVHALFESGAERYGDRNGGYCRVLHTMPRKGDNAKMAVIELV 47
+YDK+LVHALFE+ ERY DR GGYCRVL TMPR+GDNAKM +IELV
Sbjct: 114 IYDKELVHALFENAPERYADREGGYCRVLRTMPRQGDNAKMGIIELV 160 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig171837.4426.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig171837.4426.1 ID=prot_H-elongata_contig171837.4426.1|Name=mRNA_H-elongata_contig171837.4426.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=48bpback to top |