mRNA_H-elongata_contig105321.442.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig105321.442.1 vs. uniprot
Match: D7FZP1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZP1_ECTSI) HSP 1 Score: 142 bits (359), Expect = 1.150e-37 Identity = 73/100 (73.00%), Postives = 82/100 (82.00%), Query Frame = 1
Query: 1 FTASFVSNPLNIHIVQTLNAQPSQQNTLSILMTVPWSFKLVYGFLSDVLPIGGLRRKPYLIAGYLTSSVCYVALAMSPQVVAHSLVLGSVLFLATMGQIM 300
F SFV+NPLNI+IVQTLNAQPSQQNTL +LMTVPWSFKL+YGFLSDV PI GLRRKPYL GYL SS CY+ LA++ +V SL +LFLATMGQIM
Sbjct: 106 FLGSFVANPLNIYIVQTLNAQPSQQNTLVVLMTVPWSFKLIYGFLSDVCPIRGLRRKPYLAFGYLLSSFCYLVLALTAEVTIQSL--SGLLFLATMGQIM 203
BLAST of mRNA_H-elongata_contig105321.442.1 vs. uniprot
Match: A0A836CBB7_9STRA (Folate-biopterin transporter n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBB7_9STRA) HSP 1 Score: 115 bits (287), Expect = 1.170e-27 Identity = 54/100 (54.00%), Postives = 75/100 (75.00%), Query Frame = 1
Query: 1 FTASFVSNPLNIHIVQTLNAQPSQQNTLSILMTVPWSFKLVYGFLSDVLPIGGLRRKPYLIAGYLTSSVCYVALAMSPQVVAHSLVLGSVLFLATMGQIM 300
F SF+ PL + +VQ+LNAQP+QQNT+ +L+++PWSFKL+YGF+SDVLP+GGLRRKPY G+ S C++ LA + SL + +LF+AT+GQIM
Sbjct: 57 FLGSFIGTPLTVFLVQSLNAQPAQQNTIGVLLSIPWSFKLLYGFVSDVLPVGGLRRKPYFALGFALHSACFLLLAALEKPTFSSLAV--LLFVATIGQIM 154
BLAST of mRNA_H-elongata_contig105321.442.1 vs. uniprot
Match: A0A482UNW4_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482UNW4_9ARCH) HSP 1 Score: 94.4 bits (233), Expect = 2.250e-22 Identity = 48/96 (50.00%), Postives = 69/96 (71.88%), Query Frame = 1
Query: 7 ASFVSNPLNIHIVQTLNAQPSQQNTLSILMTVPWSFKLVYGFLSDVLPIGGLRRKPYLIAGYLTSSVCYVALAMSPQVVAHSLV-LGSVLFLATMG 291
+SF++ P+NI++V TLNA+P QNT+ IL T+PWS KLV+GFLSD +PI GL RKPYL G + S Y+ ++ V H++V L + +F+AT+G
Sbjct: 43 SSFLATPMNIYLVNTLNAEPQMQNTIGILQTLPWSMKLVFGFLSDTVPIFGLHRKPYLAIGAMLYSFAYMTYSV---VGLHNVVFLSACVFMATIG 135
BLAST of mRNA_H-elongata_contig105321.442.1 vs. uniprot
Match: A0A7S2XY88_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XY88_9STRA) HSP 1 Score: 99.4 bits (246), Expect = 5.970e-22 Identity = 50/100 (50.00%), Postives = 70/100 (70.00%), Query Frame = 1
Query: 1 FTASFVSNPLNIHIVQTLNAQPSQQNTLSILMTVPWSFKLVYGFLSDVLPIGGLRRKPYLIAGYLTSSVCYVALAMSPQVVAHSLVLGSVLFLATMGQIM 300
F +F S PL I +V L+AQP QQN ++IL T+PW+FKL+YGFLSD++PIGGL RKPY++ GY+ + CY+ LA + VL ++F+ T+G IM
Sbjct: 65 FLDAFFSTPLYIFLVNDLDAQPWQQNAIAILTTLPWTFKLLYGFLSDLVPIGGLHRKPYMMLGYVLVASCYLILASLQNITFP--VLAVLMFVETVGLIM 162
BLAST of mRNA_H-elongata_contig105321.442.1 vs. uniprot
Match: A0A7S1TWA3_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TWA3_9STRA) HSP 1 Score: 98.6 bits (244), Expect = 1.330e-21 Identity = 48/97 (49.48%), Postives = 73/97 (75.26%), Query Frame = 1
Query: 10 SFVSNPLNIHIVQTLNAQPSQQNTLSILMTVPWSFKLVYGFLSDVLPIGGLRRKPYLIAGYLTSSVCYVALAMSPQVVAHSLVLGSVLFLATMGQIM 300
SF++ PL +++VQ L+A+P+ QNTL++L T+PWSFKL++GFLSDV P+ G RRKPY+I G L +V ++ LA + SL +++++ATMG+IM
Sbjct: 159 SFITTPLQVYMVQDLDAEPAAQNTLNVLTTLPWSFKLLFGFLSDVQPVFGARRKPYMIIGSLMHAVSFLMLAALGEPSMQSL--STLMWVATMGEIM 253
BLAST of mRNA_H-elongata_contig105321.442.1 vs. uniprot
Match: A0A7R9U5H3_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U5H3_9STRA) HSP 1 Score: 97.8 bits (242), Expect = 2.480e-21 Identity = 50/101 (49.50%), Postives = 75/101 (74.26%), Query Frame = 1
Query: 4 TASFVSNPLNIHIVQTLNAQPSQQNTLSILMTVPWSFKLVYGFLSDVLPIGGLRRKPYLIAGYLTSSVCYVALAM--SPQVVAHSLVLGSVLFLATMGQIM 300
+ SF++ PL +++V+ L A+P QNT+SILM++PWSFKL++GF+SDV PI G RRKPY+I G + +V Y++LA+ +P + VL + ++ATMGQIM
Sbjct: 154 SVSFITTPLQVYMVEELGAEPEAQNTISILMSLPWSFKLLFGFVSDVNPILGWRRKPYMILGSMAHAVAYLSLALMGTPGIQ----VLSFLTWVATMGQIM 250
BLAST of mRNA_H-elongata_contig105321.442.1 vs. uniprot
Match: A0A7S3GWJ9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GWJ9_9STRA) HSP 1 Score: 93.6 bits (231), Expect = 2.500e-21 Identity = 48/97 (49.48%), Postives = 67/97 (69.07%), Query Frame = 1
Query: 10 SFVSNPLNIHIVQTLNAQPSQQNTLSILMTVPWSFKLVYGFLSDVLPIGGLRRKPYLIAGYLTSSVCYVALAMSPQVVAHSLVLGSVLFLATMGQIM 300
SF+ PLN+++V+ LNA+PS QNT+ IL T+PWS KLV+GFLSD +PI G++RKPYL G + S ++A A+S V L +F+ T+G IM
Sbjct: 53 SFIQTPLNVYMVKVLNAEPSLQNTIGILQTLPWSLKLVFGFLSDSVPIYGMQRKPYLAIGTVLYSFAFIAYAISG--VDSVTFLALCIFVGTLGLIM 147
BLAST of mRNA_H-elongata_contig105321.442.1 vs. uniprot
Match: A0A835Z8G1_9STRA (Biopterin transport-related protein BT1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8G1_9STRA) HSP 1 Score: 88.6 bits (218), Expect = 3.710e-18 Identity = 40/72 (55.56%), Postives = 52/72 (72.22%), Query Frame = 1
Query: 10 SFVSNPLNIHIVQTLNAQPSQQNTLSILMTVPWSFKLVYGFLSDVLPIGGLRRKPYLIAGYLTSSVCYVALA 225
SF+ P++ ++V L A PSQQN + L +PWSFKLVYGF+SD PIGG+RRKPY IAG+ S+C + LA
Sbjct: 24 SFLRTPVSYYLVHELGASPSQQNVVVTLAMLPWSFKLVYGFISDNFPIGGMRRKPYFIAGWFIYSMCNLLLA 95
BLAST of mRNA_H-elongata_contig105321.442.1 vs. uniprot
Match: A0A6V1WMI5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1WMI5_HETAK) HSP 1 Score: 88.6 bits (218), Expect = 4.120e-18 Identity = 45/100 (45.00%), Postives = 65/100 (65.00%), Query Frame = 1
Query: 1 FTASFVSNPLNIHIVQTLNAQPSQQNTLSILMTVPWSFKLVYGFLSDVLPIGGLRRKPYLIAGYLTSSVCYVALAMSPQVVAHSLVLGSVLFLATMGQIM 300
F +F+S PL ++V L+A P+QQ+ + + ++PWSFKL YGFLSD +PI G+RRKPY I G+ +C++ LA Q L S+LFL T+G +M
Sbjct: 77 FALNFLSTPLTYYMVHVLDASPAQQSVVRTMQSLPWSFKLAYGFLSDCVPIRGMRRKPYFILGWTIYLLCHLTLAALIQPSIGPLT--SLLFLGTVGYMM 174
BLAST of mRNA_H-elongata_contig105321.442.1 vs. uniprot
Match: D7G1P4_ECTSI (Biopterin transport-related protein BT1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1P4_ECTSI) HSP 1 Score: 80.9 bits (198), Expect = 2.140e-15 Identity = 34/65 (52.31%), Postives = 46/65 (70.77%), Query Frame = 1
Query: 1 FTASFVSNPLNIHIVQTLNAQPSQQNTLSILMTVPWSFKLVYGFLSDVLPIGGLRRKPYLIAGYL 195
F F++ P++ ++V + A P QQN + L +PWSFKLVYGF+SD PIGG+RRKPY I G+L
Sbjct: 87 FAIRFLTTPISYYMVNVIGASPGQQNIMLTLAQLPWSFKLVYGFISDNFPIGGMRRKPYFIMGWL 151 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig105321.442.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig105321.442.1 >prot_H-elongata_contig105321.442.1 ID=prot_H-elongata_contig105321.442.1|Name=mRNA_H-elongata_contig105321.442.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=119bp FTASFVSNPLNIHIVQTLNAQPSQQNTLSILMTVPWSFKLVYGFLSDVLPback to top mRNA from alignment at H-elongata_contig105321:161..1013+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig105321.442.1 ID=mRNA_H-elongata_contig105321.442.1|Name=mRNA_H-elongata_contig105321.442.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=853bp|location=Sequence derived from alignment at H-elongata_contig105321:161..1013+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig105321:161..1013+ >mRNA_H-elongata_contig105321.442.1 ID=mRNA_H-elongata_contig105321.442.1|Name=mRNA_H-elongata_contig105321.442.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=714bp|location=Sequence derived from alignment at H-elongata_contig105321:161..1013+ (Himanthalia elongata Himel1 dioecious)back to top |