prot_H-elongata_contig171676.4416.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig171676.4416.1
Unique Nameprot_H-elongata_contig171676.4416.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length140
Homology
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BLAST of mRNA_H-elongata_contig171676.4416.1 vs. uniprot
Match: A0A6H5KUE0_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KUE0_9PHAE)

HSP 1 Score: 176 bits (447), Expect = 1.650e-50
Identity = 87/140 (62.14%), Postives = 107/140 (76.43%), Query Frame = 0 
Query:    1 LSQAKLAVHRAMLGRCFSILSTCLRKEQLKVGLNVEEVAALARSAYLAGPHERLGAIFPLFDTHGDGHLDSDGVERAVDATVTSVTSVADRFYGVAARSALDKKAAKAMPKMMKYAQWDMLQVPLKRRCAFAWAENRKQV 140
            L QA+L  HRAML    S+LS+ L K+QLK GL++ EV A  RSAYLA P +RL A++PLFDTHGDGHLD++ V+ AVDA V SVT+ ++R Y  AAR ALDKK A  MP  MKY  WD+++VP+KRRC+FAWAENRKQV
Sbjct:  278 LYQARLGAHRAMLCHFLSLLSSSLGKQQLKTGLSLGEVVAATRSAYLAAPEDRLAAVYPLFDTHGDGHLDTESVDLAVDAVVLSVTAASERCYAAAARPALDKKTAAVMPATMKYVLWDVMEVPMKRRCSFAWAENRKQV 417
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig171676.4416.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KUE0_9PHAE1.650e-5062.14Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig171676contigH-elongata_contig171676:309..1288 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig171676.4416.1mRNA_H-elongata_contig171676.4416.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig171676 309..1288 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig171676.4416.1 ID=prot_H-elongata_contig171676.4416.1|Name=mRNA_H-elongata_contig171676.4416.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=140bp
LSQAKLAVHRAMLGRCFSILSTCLRKEQLKVGLNVEEVAALARSAYLAGP
HERLGAIFPLFDTHGDGHLDSDGVERAVDATVTSVTSVADRFYGVAARSA
LDKKAAKAMPKMMKYAQWDMLQVPLKRRCAFAWAENRKQV
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