mRNA_H-elongata_contig171498.4406.1 (mRNA) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig171498.4406.1 vs. uniprot
Match: A0A6H5KNX7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNX7_9PHAE) HSP 1 Score: 355 bits (910), Expect = 4.740e-116 Identity = 171/191 (89.53%), Postives = 181/191 (94.76%), Query Frame = 1
Query: 1 CVAQQEGEKLLRRVPEIDLVMGPQYANRLGDLLEDVMNGNQVVATDPSLIMEDISKPRRGSSTCAWVNIIYGCNEHCTYCVVPGVRGVEQSRPKESIRQEMLGLAAAGYREVTLLGQNVDAYGRDMVPRQTFADLLRYVADVPGIERVRFVTSHPRYMSLRVVETVAEKPTLAECFMVPFQSGDDEVLARL 573
CVAQQEGEKLLRRVPEIDLVMGPQYANRLGDLLEDVMNGNQ+VATDPSLIMED+SKPRRGSSTCAWVNIIYGCNEHCTYCVVPGVRGVEQSRPKESIRQEM+ LAAAGYREVTLLGQNVDAYGRDM PR +FADLL YV+DVPGIERVRFVTSHPRYMSL VV+ VA P++AECFMVPFQSGD+EVL +
Sbjct: 372 CVAQQEGEKLLRRVPEIDLVMGPQYANRLGDLLEDVMNGNQIVATDPSLIMEDVSKPRRGSSTCAWVNIIYGCNEHCTYCVVPGVRGVEQSRPKESIRQEMVELAAAGYREVTLLGQNVDAYGRDMNPRNSFADLLHYVSDVPGIERVRFVTSHPRYMSLDVVDAVANLPSMAECFMVPFQSGDNEVLKNM 562
BLAST of mRNA_H-elongata_contig171498.4406.1 vs. uniprot
Match: A0A835YXD9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXD9_9STRA) HSP 1 Score: 327 bits (839), Expect = 4.480e-108 Identity = 156/191 (81.68%), Postives = 170/191 (89.01%), Query Frame = 1
Query: 1 CVAQQEGEKLLRRVPEIDLVMGPQYANRLGDLLEDVMNGNQVVATDPSLIMEDISKPRRGSSTCAWVNIIYGCNEHCTYCVVPGVRGVEQSRPKESIRQEMLGLAAAGYREVTLLGQNVDAYGRDMVPRQTFADLLRYVADVPGIERVRFVTSHPRYMSLRVVETVAEKPTLAECFMVPFQSGDDEVLARL 573
CVAQQEGEKLLRR+PEIDLVMGPQYANRLGDLLEDVMNGNQVVATDPSLIMEDIS+P+R S CAWVNIIYGCNEHCTYCVVPG RGVEQSRPKESIR E+ LAA GYRE+TLLGQN+DAYGRDM P+QTFADLL Y+ DV GIER+R+VTSHPRYMS RVV+ VA + EC+ VPFQSGDDEVL R+
Sbjct: 146 CVAQQEGEKLLRRIPEIDLVMGPQYANRLGDLLEDVMNGNQVVATDPSLIMEDISRPKRSSDICAWVNIIYGCNEHCTYCVVPGTRGVEQSRPKESIRAEVEDLAARGYREITLLGQNIDAYGRDMSPKQTFADLLHYLNDVEGIERIRYVTSHPRYMSERVVDAVANLDKVCECYHVPFQSGDDEVLRRM 336
BLAST of mRNA_H-elongata_contig171498.4406.1 vs. uniprot
Match: A0A7S4DL29_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DL29_HETAK) HSP 1 Score: 326 bits (835), Expect = 5.890e-107 Identity = 155/188 (82.45%), Postives = 172/188 (91.49%), Query Frame = 1
Query: 1 CVAQQEGEKLLRRVPEIDLVMGPQYANRLGDLLEDVMNGNQVVATDPSLIMEDISKPRRGSSTCAWVNIIYGCNEHCTYCVVPGVRGVEQSRPKESIRQEMLGLAAAGYREVTLLGQNVDAYGRDMVPRQTFADLLRYVADVPGIERVRFVTSHPRYMSLRVVETVAEKPTLAECFMVPFQSGDDEVL 564
CVAQQEGE+LLRRVPE+DLVMGPQYANRLGDLLEDV+NGNQVVATDP+LIMED+SKPRRGS+TCAWVN+IYGCNEHCTYCVVPG RGVEQSRPKESIR+E+ LAAAGYRE+TLLGQN+DAYGRDM P+Q+FADLL YVA VPGI RVR+VTSHPRYMS RVV+ VA P + ECF VP QSG D+VL
Sbjct: 186 CVAQQEGERLLRRVPELDLVMGPQYANRLGDLLEDVVNGNQVVATDPTLIMEDVSKPRRGSATCAWVNVIYGCNEHCTYCVVPGTRGVEQSRPKESIRREIEELAAAGYREITLLGQNIDAYGRDMAPKQSFADLLHYVAAVPGIARVRYVTSHPRYMSERVVDAVAALPGVMECFYVPPQSGSDKVL 373
BLAST of mRNA_H-elongata_contig171498.4406.1 vs. uniprot
Match: A0A7S2V0W1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V0W1_9STRA) HSP 1 Score: 314 bits (804), Expect = 8.830e-105 Identity = 148/186 (79.57%), Postives = 168/186 (90.32%), Query Frame = 1
Query: 16 EGEKLLRRVPEIDLVMGPQYANRLGDLLEDVMNGNQVVATDPSLIMEDISKPRRGSSTCAWVNIIYGCNEHCTYCVVPGVRGVEQSRPKESIRQEMLGLAAAGYREVTLLGQNVDAYGRDMVPRQTFADLLRYVADVPGIERVRFVTSHPRYMSLRVVETVAEKPTLAECFMVPFQSGDDEVLARL 573
EGE+ LRRVPE+DLVMGPQYANRLGDLLEDVM G+QVVATDP+LI+ED+SKPRRGS+ CAWVNIIYGCNE C+YCVVP RGVEQSRP+ESIR+EM LAAAGYRE+TLLGQN+DAYGRDM P+QTFADLL YV+DVPGIER+RFVTSHPRYMSL+VV+ VA PT+ E F VPFQSGDD+VL +
Sbjct: 1 EGEQQLRRVPEVDLVMGPQYANRLGDLLEDVMQGSQVVATDPTLILEDVSKPRRGSTVCAWVNIIYGCNERCSYCVVPTTRGVEQSRPRESIRREMEELAAAGYREITLLGQNIDAYGRDMQPKQTFADLLHYVSDVPGIERIRFVTSHPRYMSLKVVDAVASLPTMCENFYVPFQSGDDQVLKNM 186
BLAST of mRNA_H-elongata_contig171498.4406.1 vs. uniprot
Match: A0A7S2AZH5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AZH5_9STRA) HSP 1 Score: 299 bits (765), Expect = 1.860e-99 Identity = 141/181 (77.90%), Postives = 162/181 (89.50%), Query Frame = 1
Query: 31 LRRVPEIDLVMGPQYANRLGDLLEDVMNGNQVVATDPSLIMEDISKPRRGSSTCAWVNIIYGCNEHCTYCVVPGVRGVEQSRPKESIRQEMLGLAAAGYREVTLLGQNVDAYGRDMVPRQTFADLLRYVADVPGIERVRFVTSHPRYMSLRVVETVAEKPTLAECFMVPFQSGDDEVLARL 573
LRR PE+DLVMGPQYANR+GDLLEDVMNGNQVVATDP IMED+SKPRRGS+TCAWVN+IYGCNEHCTYCVVP RGVEQSRP+E+IR+E+ LA +GY+E+TLLGQN+DA+GRDM P+Q F+DLL +VADVPGIERVRFVTSHPRYMS RVV+ VA +P L E F VPFQSGD+ VLAR+
Sbjct: 1 LRRFPEVDLVMGPQYANRIGDLLEDVMNGNQVVATDPLHIMEDVSKPRRGSTTCAWVNVIYGCNEHCTYCVVPTTRGVEQSRPREAIRKEIEDLAKSGYKEITLLGQNIDAWGRDMSPKQKFSDLLLHVADVPGIERVRFVTSHPRYMSDRVVDAVASEPKLCEVFHVPFQSGDNTVLARM 181
BLAST of mRNA_H-elongata_contig171498.4406.1 vs. uniprot
Match: A0A7S2S7D0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S7D0_9STRA) HSP 1 Score: 309 bits (791), Expect = 3.030e-99 Identity = 145/191 (75.92%), Postives = 167/191 (87.43%), Query Frame = 1
Query: 1 CVAQQEGEKLLRRVPEIDLVMGPQYANRLGDLLEDVMNGNQVVATDPSLIMEDISKPRRGSSTCAWVNIIYGCNEHCTYCVVPGVRGVEQSRPKESIRQEMLGLAAAGYREVTLLGQNVDAYGRDMVPRQTFADLLRYVADVPGIERVRFVTSHPRYMSLRVVETVAEKPTLAECFMVPFQSGDDEVLARL 573
CVAQQEGE+LLRRVPE+DLVMGPQY+NR+GDLLEDVMNGNQVVATDP IMED++KPRRGS+ CAWVN+IYGCNEHCTYCVVPG RGVEQSRP+E+IRQE+ L GYREVTLLGQN+DA+GRDM PRQ F++LLR V+ VPGIERVRFVTSHPRYMS RV+ V E+ + E F +PFQSGD+EVL +
Sbjct: 277 CVAQQEGEQLLRRVPEVDLVMGPQYSNRIGDLLEDVMNGNQVVATDPLHIMEDVTKPRRGSTVCAWVNVIYGCNEHCTYCVVPGTRGVEQSRPREAIRQEVEDLVKQGYREVTLLGQNIDAWGRDMQPRQRFSELLRDVSSVPGIERVRFVTSHPRYMSPRVISAVYEEDSACEMFHIPFQSGDNEVLKNM 467
BLAST of mRNA_H-elongata_contig171498.4406.1 vs. uniprot
Match: A0A7S0LA52_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LA52_9EUKA) HSP 1 Score: 300 bits (768), Expect = 7.950e-99 Identity = 144/191 (75.39%), Postives = 164/191 (85.86%), Query Frame = 1
Query: 1 CVAQQEGEKLLRRVPEIDLVMGPQYANRLGDLLEDVMNGNQVVATDPSLIMEDISKPRRGSSTCAWVNIIYGCNEHCTYCVVPGVRGVEQSRPKESIRQEMLGLAAAGYREVTLLGQNVDAYGRDMVPRQTFADLLRYVADVPGIERVRFVTSHPRYMSLRVVETVAEKPTLAECFMVPFQSGDDEVLARL 573
CVAQQEGE LLRRVPEIDLVMGPQYANR+GDLLE V NGNQVVAT P+ IMED+++P+R S TCAWVNIIYGCNE C+YCVVP RG EQSRP+ESIR E+ L AAGYREVTLLGQN+DA+GRD+ PRQTFADLLR +A VPG++R+RFVTSHPRYMS RVV+ VAE P L E F VPFQ+GDD+VL +
Sbjct: 32 CVAQQEGEALLRRVPEIDLVMGPQYANRIGDLLEGVFNGNQVVATAPTHIMEDLTQPQRHSKTCAWVNIIYGCNERCSYCVVPTTRGAEQSRPRESIRAEIAELVAAGYREVTLLGQNIDAWGRDLTPRQTFADLLRDMAGVPGLDRMRFVTSHPRYMSERVVKAVAEMPALCEMFHVPFQAGDDDVLKAM 222
BLAST of mRNA_H-elongata_contig171498.4406.1 vs. uniprot
Match: A0A8J5X4V1_DIALT (Uncharacterized protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5X4V1_DIALT) HSP 1 Score: 306 bits (784), Expect = 1.080e-97 Identity = 145/191 (75.92%), Postives = 166/191 (86.91%), Query Frame = 1
Query: 1 CVAQQEGEKLLRRVPEIDLVMGPQYANRLGDLLEDVMNGNQVVATDPSLIMEDISKPRRGSSTCAWVNIIYGCNEHCTYCVVPGVRGVEQSRPKESIRQEMLGLAAAGYREVTLLGQNVDAYGRDMVPRQTFADLLRYVADVPGIERVRFVTSHPRYMSLRVVETVAEKPTLAECFMVPFQSGDDEVLARL 573
CVAQQEG +LLRRVPE+D+VMGPQY+NRLGDLLED +NGNQVVAT+P+ IMED++KPRRGS CAWVN+IYGCNE CTYCVVPG RGVEQSRP ESIR+EM LAA GY+EVTLLGQNVDAYGRDM P++ F++LLR+VA+VPGIERVRFVTSHPRYMS V+ VAE P L F +P QSGDDEVL R+
Sbjct: 330 CVAQQEGARLLRRVPEVDVVMGPQYSNRLGDLLEDALNGNQVVATEPTYIMEDVTKPRRGSGVCAWVNVIYGCNERCTYCVVPGTRGVEQSRPVESIRKEMEELAAVGYKEVTLLGQNVDAYGRDMSPKRKFSELLRHVANVPGIERVRFVTSHPRYMSESVITAVAECPRLMPVFHIPAQSGDDEVLRRM 520
BLAST of mRNA_H-elongata_contig171498.4406.1 vs. uniprot
Match: A0A0G4ERE5_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4ERE5_VITBC) HSP 1 Score: 301 bits (770), Expect = 9.950e-96 Identity = 140/191 (73.30%), Postives = 166/191 (86.91%), Query Frame = 1
Query: 1 CVAQQEGEKLLRRVPEIDLVMGPQYANRLGDLLEDVMNGNQVVATDPSLIMEDISKPRRGSSTCAWVNIIYGCNEHCTYCVVPGVRGVEQSRPKESIRQEMLGLAAAGYREVTLLGQNVDAYGRDMVPRQTFADLLRYVADVPGIERVRFVTSHPRYMSLRVVETVAEKPTLAECFMVPFQSGDDEVLARL 573
CVAQQEGE+LLRRVPE+DLVMGPQYANRLGDLLEDV NGNQVVAT+P+ IMED +KPRR SS AWVN+IYGCNEHCTYCVVP RGVEQSRP ES+R+EM L A G++EVTLLGQN+D++GRDM P++ F+DLL +VAD PG+ER+RFVTSHPRY+S RVV+ VAE P+L E F +PFQ+GD+EVL +
Sbjct: 274 CVAQQEGERLLRRVPELDLVMGPQYANRLGDLLEDVANGNQVVATEPTFIMEDSTKPRRESSVAAWVNVIYGCNEHCTYCVVPNTRGVEQSRPMESVRREMEELGALGFKEVTLLGQNIDSWGRDMHPKRKFSDLLHHVADTPGVERIRFVTSHPRYISERVVDAVAEHPSLMEYFHIPFQAGDNEVLRNM 464
BLAST of mRNA_H-elongata_contig171498.4406.1 vs. uniprot
Match: L1ITN0_GUITC (Uncharacterized protein n=3 Tax=Guillardia theta TaxID=55529 RepID=L1ITN0_GUITC) HSP 1 Score: 291 bits (745), Expect = 8.340e-95 Identity = 139/191 (72.77%), Postives = 161/191 (84.29%), Query Frame = 1
Query: 1 CVAQQEGEKLLRRVPEIDLVMGPQYANRLGDLLEDVMNGNQVVATDPSLIMEDISKPRRGSSTCAWVNIIYGCNEHCTYCVVPGVRGVEQSRPKESIRQEMLGLAAAGYREVTLLGQNVDAYGRDMVPRQTFADLLRYVADVPGIERVRFVTSHPRYMSLRVVETVAEKPTLAECFMVPFQSGDDEVLARL 573
CVAQQEGEKLLRRVPE+D+VMGPQYANR+GDLLEDV+NGNQVVAT+ + +MED ++PRR S AWVN+IYGCNE CTYCVVP RGVEQSRPKESIR+EM L GYREVTLLGQN+DA+GRDM P+Q F++LL A V +ER+RFVTSHPRYMSL VVETVA+ L +CF +PFQSGDDEVL R+
Sbjct: 73 CVAQQEGEKLLRRVPELDMVMGPQYANRIGDLLEDVVNGNQVVATEAAPMMEDSTRPRRESEVTAWVNVIYGCNERCTYCVVPTTRGVEQSRPKESIRKEMEELGRKGYREVTLLGQNIDAWGRDMEPKQRFSELLEEAATVEQVERIRFVTSHPRYMSLSVVETVAKHAKLCKCFHIPFQSGDDEVLRRM 263 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig171498.4406.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig171498.4406.1 >prot_H-elongata_contig171498.4406.1 ID=prot_H-elongata_contig171498.4406.1|Name=mRNA_H-elongata_contig171498.4406.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=195bp CVAQQEGEKLLRRVPEIDLVMGPQYANRLGDLLEDVMNGNQVVATDPSLIback to top mRNA from alignment at H-elongata_contig171498:154..1251- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig171498.4406.1 ID=mRNA_H-elongata_contig171498.4406.1|Name=mRNA_H-elongata_contig171498.4406.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1098bp|location=Sequence derived from alignment at H-elongata_contig171498:154..1251- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig171498:154..1251- >mRNA_H-elongata_contig171498.4406.1 ID=mRNA_H-elongata_contig171498.4406.1|Name=mRNA_H-elongata_contig171498.4406.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1170bp|location=Sequence derived from alignment at H-elongata_contig171498:154..1251- (Himanthalia elongata Himel1 dioecious)back to top |