mRNA_H-elongata_contig17147.4403.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig17147.4403.1
Unique NamemRNA_H-elongata_contig17147.4403.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig17147.4403.1 vs. uniprot
Match: A0A4Y9ZVS1_9AGAM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Y9ZVS1_9AGAM)

HSP 1 Score: 293 bits (749), Expect = 2.970e-89
Identity = 172/480 (35.83%), Postives = 262/480 (54.58%), Query Frame = 1
Query:    4 TMGEAQASSEWPQWKRAITREMDGQIARGVWQVVERTKRKTVLGTRVVFKRKIDKDGSIEKYKCRLVAQGFRQVKGIHCEESSSPTPV*ASIRMILSMIAALGWEARQLDVDMAYLEVDVEEEIYVELPEAYCD--SRKQVGLLRKAMYGRVHAALLW*KTFGIELEAKGFQRSQVDPYEFRRILHGAVVVVIVVYVDDLLVASPTKRDKEQAVRDLCSCFPIKDLAEASYYLGCDITRDRNAGTLKFDQHQYIQTMAESFGVTKTSIIPSAAGGK-ALSKSDSPQTDEEVEEMCHIPYREIVGALMWAATMTRPDISFAAHQLAKFNDNPGPTHWRAV*RALQYLWRTRDLGITYGGEPGGGTKLSAWIDADCGAYPDTRRSVSGGAVMMDGGAISWFSRVQKVTGAASSESEYVALAEILNELRFLRHIKEFMTPPIDVAIKIHEGNEGAIKMVKNRFSSRRTRHVDIKHHIVRYAIE 1434
            T+ EA+AS EWPQW+ AI  E+      G W++ E+     V+G+  VFK K D  G+I KYK RLVAQGF Q+ G+   ++ +P    +SIR++ ++ A   WE  Q+DV  AYL  D+EEEI+++ P  +      ++V  L K +YG   A   W K         GF RS VD   F R      + ++ V VDDL +A+ +  +       L   F + DL E  + LG +I RDR   T+   Q  YI T+   F +     + +A     +L+   SP T ++ ++M +I YRE +G+LM+AA  TRPD+S+A   L++F  NPG  HW A  R ++YL  T++  +TYGG+   G  +  + DAD G+  D RRS+SG   ++DGGA+SW S+ Q +   +S+E+EYVA+     E+ + R     +  P D    ++  N+ AI + K+     RT+H+ I+ H +R  +E
Sbjct:   32 TVDEAKASGEWPQWEAAIEDELGRMKKMGTWELAEKPPGANVVGSWWVFKIKRDASGAIAKYKARLVAQGFSQIPGVDYTDTFAPVAKLSSIRILAALAARFDWELHQMDVKNAYLNGDLEEEIFMKQPPGFPTPGQEQKVCHLFKPIYGLKQAGRRWYKKLCAAFLDMGFARSSVDHSVFFRHGPNGEIAIVAVSVDDLAIAANSVDEMSHIKSALKLKFEMTDLGEIHWLLGLEIKRDRRGRTISMLQRAYIDTILSRFNLQDAKSLTTAIDPSFSLTTDQSPSTPQQYDDMRNILYREAIGSLMYAAIGTRPDVSYAVTALSQFMQNPGHPHWEAAKRVMRYLKGTKEEWLTYGGDNANG--MEGFSDADWGSS-DHRRSISGYVFLIDGGAVSWSSKKQPIVALSSTEAEYVAMTHAAKEVLWTRAFLGEIISPFDKPTTLYADNQSAITLAKDNLYHARTKHIAIRFHFIRDIVE 508          
BLAST of mRNA_H-elongata_contig17147.4403.1 vs. uniprot
Match: A0A060SPD4_PYCCI (Integrase catalytic domain-containing protein n=1 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060SPD4_PYCCI)

HSP 1 Score: 301 bits (772), Expect = 3.810e-87
Identity = 173/480 (36.04%), Postives = 270/480 (56.25%), Query Frame = 1
Query:   13 EAQASSEWPQWKRAITREMDGQIARGVWQVVERTKRKTVLGTRVVFKRKIDKDGSIEKYKCRLVAQGFRQVKGIHCEESSSPTPV*ASIRMILSMIAALGWEARQLDVDMAYLEVDVEEEIYVELP--EAYCDSRKQVGLLRKAMYGRVHAALLW*KTFGIELEAKGFQRSQVDPYEFRRILHGAVVVVIVVYVDDLLVASPTKRDKEQAVRDLCSCFPIKDLAEASYYLGCDITRDRNAGTLKFDQHQYIQTMAESFGVTKTSIIPSAAGG-KALSKSDSPQTDEEVEEMCHIPYREIVGALMWAATMTRPDISFAAHQLAKFNDNPGPTHWRAV*RALQYLWRTRDLGITYGGEPGGGTKLSAWIDADCGAYPDTRRSVSGGAVMMDGGAISWFSRVQKVTGAASSESEYVALAEILNELRFLRHIKEFMTPPIDVAIKIHEGNEGAIKMVKNRFSSRRTRHVDIKHHIVRYAIEGES 1443
            EA+   +WP+W+ AI  E+D  +A G W++V R     V+ ++ V + K +  G I+KYK RLVA+GF QV G+   ++ +P    +SIR++L++ A  GW A   D + AYL   ++E++Y+E P   A+ D +  V  L KA+YG       W +T    L   GF R + D   F +   G  ++V+ V+VDD L+   ++R  +     + + + I DL   S+ LG  I+ D  AGTL   QH YI+ +   F  T    +       + LSK+  P++  EV  M  +PYRE +GALM+AA  TRPDI+FA   LA+F  NPG  HW AV R  +YL  TR L + YGG+     +L  +++AD GA  + RR+++G   ++DGGA+SW S+ Q++   +++ESEYVA      E  +LR +   +  P+  A  ++  N+ AI + K+     RT+H+D+++H +RY I+  S
Sbjct:  803 EAKKRPDWPKWQEAIKAELDSLVANGTWRIVPRPSSGNVVDSKWVLRVKKNAAGEIDKYKARLVARGFTQVYGVDYYDTFAPVAKLSSIRLLLAIAARNGWAADSFDFNSAYLNSKLDEDVYLEQPPDHAFADRKAFVLKLEKALYGLKQGGRKWYETLCAALGRLGFTRVEADWGVFYK-HEGEHLIVLAVHVDDCLLTGSSRRLLDDTKSKIGTVYKITDLGPVSWLLGIKISCDLEAGTLSLSQHAYIEALLARFNFTDLKPVSMPMDPHQLLSKTQCPESPAEVARMRRVPYREAIGALMYAALGTRPDIAFAVSTLAQFAQNPGQPHWDAVKRIFRYLLGTRTLSLIYGGQQ---RELEGYVNAD-GATQEHRRAITGYVFLVDGGAVSWASKKQELVTLSTAESEYVAATHAAKEAIWLRRLIGEVFGPLSNATMLYSDNQAAIALTKDGSYHARTKHIDVRYHFIRYYIDAGS 1277          
BLAST of mRNA_H-elongata_contig17147.4403.1 vs. uniprot
Match: A0A5K1K0E1_9APHY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ganoderma boninense TaxID=34458 RepID=A0A5K1K0E1_9APHY)

HSP 1 Score: 293 bits (751), Expect = 1.040e-86
Identity = 171/483 (35.40%), Postives = 277/483 (57.35%), Query Frame = 1
Query:    4 TMGEAQASSEWPQWKRAITREMDGQIARGVWQVVERTKRKTVLGTRVVFKRKIDKDGSIEKYKCRLVAQGFRQVKGIHCEESSSPTPV*ASIRMILSMIAALGWEARQLDVDMAYLEVDVEEEIYVELPEAYCDSRKQ--VGLLRKAMYGRVHAALLW*KTFGIELEAKGFQRSQVDPYEFRRILHGAVVVVIVVYVDDLLVASPTKRDKEQAVRDLCSCFPIKDLAEASYYLGCDITRDRNAGTLKFDQHQYIQTMAESFGV--TKTSIIPSAAGGKALSKSDSPQTDEEVEEMCHIPYREIVGALMWAATMTRPDISFAAHQLAKFNDNPGPTHWRAV*RALQYLWRTRDLGITYGGEPGGGTKLSAWIDADCGAYPDTRRSVSGGAVMMDGGAISWFSRVQKVTGAASSESEYVALAEILNELRFLRHIKEFMTPP--IDVAIKIHEGNEGAIKMVKNRFSSRRTRHVDIKHHIVRYAIE 1434
            ++ EAQAS +WPQW+RAI  EM+   A G + +V +     V+G+++VF RK + +G++ + K R+VAQGF Q+ GI   E+ +P    +S+R+++++ A  GW   QLDV  AYL  D++EEIY+  P     + ++  V  L+K++YG   A   W KT+   + A G  RS+ D   F +   G  + ++   VDD+LV   T    E+    + + F + D  E ++ LG ++ RD+ AGT++  Q   I  +  +  +   K++  P A GGK L ++  P T E + +M  IPY++ VG  M+ A  +RPDI+   H+LAK+  NPG  HW A+ R ++YL  TR+L + YG +  G   L+ + DAD G   DTR SV G    +DGGAISW ++ Q V   +S+E+EY+ +     E  +LR +   +  P    +A++++  N+GA+ + +N     RT+H+ I++H +R A+E
Sbjct:  324 SLREAQASPDWPQWERAIEVEMENLRAHGTYDLVVKPPGAHVIGSKLVFHRKRNAEGAVTQCKVRVVAQGFAQIPGIDFNETFAPVAKPSSLRVMIALAARFGWPMIQLDVKSAYLNGDLDEEIYMRQPPGTAAAGEEHLVCRLKKSLYGLKQAGRAWYKTYREAMSALGMTRSEADHACFWQ-RDGESLAMVGTIVDDMLVTG-TPDLVERFRGGIKTHFTVTDSGEVAWLLGIEVVRDKGAGTVRIAQRTAIDAIVRALHLEGAKSASTPIAVGGK-LDRTQCPTTHEAIADMALIPYKQGVGMCMYVAVTSRPDIAHTVHRLAKYMANPGRAHWEALKRLVRYLAGTRELWLVYGRDSSG---LAGFTDADWGTSDDTRHSVCGYVYNLDGGAISWSAKQQNVVALSSTEAEYIGITHAAKEAIWLRTLLADLVHPDFATLAVRLYSDNKGAMDLARNNAFHARTKHIAIRYHFIREAVE 800          
BLAST of mRNA_H-elongata_contig17147.4403.1 vs. uniprot
Match: A0A2R6PCF8_9APHY (Uncharacterized protein n=1 Tax=Hermanssonia centrifuga TaxID=98765 RepID=A0A2R6PCF8_9APHY)

HSP 1 Score: 299 bits (766), Expect = 5.660e-86
Identity = 177/483 (36.65%), Postives = 273/483 (56.52%), Query Frame = 1
Query:    4 TMGEAQASSEWPQWKRAITREMDGQIARGVWQVVERTKRKTVLGTRVVFKRKIDKDGSIEKYKCRLVAQGFRQVKGIHCEESSSPTPV*ASIRMILSMIAALGWEARQLDVDMAYLE--VDVEEEIYVELPEAYC--DSRKQVGLLRKAMYGRVHAALLW*KTFGIELEAKGFQRSQVDPYEFRRILHGAVVVVIVVYVDDLLVASPTKRDKEQAVRDLCSCFPIKDLAEASYYLGCDITRDRNAGTLKFDQHQYIQTMAESFGVT--KTSIIPSAAGGKALSKSDSPQTDEEVEEMCHIPYREIVGALMWAATMTRPDISFAAHQLAKFNDNPGPTHWRAV*RALQYLWRTRDLGITYGGEPGGGTKLSAWIDADCGAYPDTRRSVSGGAVMMDGGAISWFSRVQKVTGAASSESEYVALAEILNELRFLRHIKEFMTPPIDVAIKIHEGNEGAIKMVKNRFSSRRTRHVDIKHHIVRYAIE 1434
            T+ EA+   +WP+W  AI  E++     G W++V+R     V+G++ V + K D  G+I+KYK RLVAQGF Q+ GI   E+ +P    +SIR+IL++ A  GW+ +  D + AYL   +D +E IY+E P  +   D +  V  LRKA+YG       W +   I L   GF R++ D Y     +    + V+ ++VDD  +   +     +  R +   +P+ DL E S+ LG  + RDR A TL   QH YI ++   F  T  K S IP     + L+KS  P +  ++  M  IPYRE +G+LM+AA  TRPDISFA   LA+F+ NPG THW AV R  +YL  T++L + YGG   G   L  ++DAD GA  + R +++G   ++DGGA+SW S+ Q++   +++E+EYVA      E  ++R +   +  P+D    ++  ++ AI + K+     RT+H+DI++H +RY +E
Sbjct:  965 TLEEARKRPDWPKWLAAIRAELESLKLNGTWELVDRPSAVNVVGSKWVLRIKKDASGAIDKYKARLVAQGFTQIHGIDYFETFAPVAKLSSIRLILAIAARNGWDIQSFDFNSAYLNSTLDDDEVIYLEQPPDFAEKDPKNYVLRLRKALYGLKQGGRKWYEHLCIALADLGFNRAESD-YGVFFAIDANNITVLAIHVDDCAITGSSTPLISEYKRRIGEKYPLTDLGEVSWLLGIKVARDREARTLSLSQHAYIDSILARFNFTDLKPSSIPMDPNLQ-LTKSQCPTSLADIARMRKIPYREAIGSLMYAAVGTRPDISFAISTLAQFSQNPGWTHWEAVKRVFRYLLGTKNLVLQYGGVQRG---LEGYVDAD-GASQEHRHAITGYVFLVDGGAVSWSSKKQELVTLSTTEAEYVAATHAAKEAMWIRQLLGEVFRPLDGPTTLYSDSQSAIALTKDGQYHARTKHIDIRYHFIRYVVE 1441          
BLAST of mRNA_H-elongata_contig17147.4403.1 vs. uniprot
Match: A0A401GP19_9APHY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GP19_9APHY)

HSP 1 Score: 286 bits (731), Expect = 1.050e-85
Identity = 171/483 (35.40%), Postives = 266/483 (55.07%), Query Frame = 1
Query:    4 TMGEAQASSEWPQWKRAITREMDGQIARGVWQVVERTKRKTVLGTRVVFKRKIDKDGSIEKYKCRLVAQGFRQVKGIHCEESSSPTPV*ASIRMILSMIAALGWEARQLDVDMAYLEVDVEEEIYVELPEAYCDSRKQ--VGLLRKAMYGRVHAALLW*KTFGIELEAKGFQRSQVDPYEF-RRILHGAVVVVIVVYVDDLLVASPTKRDKEQAVRDLCSCFPIKDLAEASYYLGCDITRDRNAGTLKFDQHQYIQTMAESFGVTKT-SIIPSAAGGKALSKSDSPQTDEEVEEMCHIPYREIVGALMWAATMTRPDISFAAHQLAKFNDNPGPTHWRAV*RALQYLWRTRDLGITYGGEPGGGTKLSAWIDADCGAYPDTRRSVSGGAVMMDGGAISWFSRVQKVTGAASSESEYVALAEILNELRFLRHIKEFMTPP--IDVAIKIHEGNEGAIKMVKNRFSSRRTRHVDIKHHIVRYAIE 1434
            ++ EA  S+EWP+WK AI +EM    + G + +VE  K   ++G++ VF+ K + +  IE YK RLVAQGF QV GI   E+ +P    ASI +IL++ A   WE  Q+DV  AYL  D+EEEIY++ P    +  K+  V  L++ +YG   +   + K    EL + G  RS+VD   F  R     ++++I + VDD  +A  TK       R++ + F + DL E  + LG ++ RDR+  TL   QH YI  +   F +    S+      G  LS    P T  + E+M +IPYRE++G+LM+AA  TRPDI++A   L++F  NPG  HW A  R  +YL  TR+  +T+G    G   +  + DAD G+  + R S+SG   ++DG A+SW ++ Q V   +S+E+EY+A+     E  +L  +   +  P  +   +++H  N+  I + K+     RT+H+DI+ H +   +E
Sbjct:  114 SLNEAMQSTEWPKWKEAIVKEMQNLDSHGTYTLVEPPKNTNIVGSKFVFRIKHNAEREIESYKARLVAQGFTQVPGIDFNETFAPVAKLASIHLILALAACYDWELHQMDVKGAYLNGDLEEEIYMQQPPGQAEPGKEHLVCRLKRPLYGLKQSGRQFHKKISGELGSMGLTRSKVDHCVFWLRNEEDVLILLIALSVDDSTIAG-TKAAVFWFKREISTRFKMSDLGEMHWILGIEVQRDRDVRTLSLSQHVYIDMILTRFNLQDAKSLTTPLDPGTVLSIHQCPSTPRQFEDMKNIPYREVIGSLMYAALGTRPDIAYAITALSQFMQNPGQPHWEAAKRVFRYLAGTRERWLTFGETTDG---VEGFSDADWGSA-EHRHSISGYVFLLDGSAVSWSAKKQNVVALSSTEAEYIAITHATKEALWLHSLLADVLHPDILRYPVRLHSDNKSVIALAKDDAYHARTKHIDIRFHFIHKTVE 591          
BLAST of mRNA_H-elongata_contig17147.4403.1 vs. uniprot
Match: A0A1M2V8C6_TRAPU (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Trametes pubescens TaxID=154538 RepID=A0A1M2V8C6_TRAPU)

HSP 1 Score: 297 bits (760), Expect = 3.940e-85
Identity = 179/486 (36.83%), Postives = 277/486 (57.00%), Query Frame = 1
Query:    1 TTMGEAQASSEWPQWKRAITREMDGQIARGVWQVVERTKRKTVLGTRVVFKRKIDKDGSIEKYKCRLVAQGFRQVKGIHCEESSSPTPV*ASIRMILSMIAALGWEARQLDVDMAYLEVDVEEEIYVELPEAYCDSRKQ--VGLLRKAMYGRVHAALLW*KTFGIELEAKGFQRSQVDPYEFRRILHGAVVVVIV-VYVDDLLVA-SPTKRDKEQAVRDLCSCFPIKDLAEASYYLGCDITRDRNAGTLKFDQHQYIQTMAESFGV--TKTSIIPSAAGGKALSKSDSPQTDEEVEEMCHIPYREIVGALMWAATMTRPDISFAAHQLAKFNDNPGPTHWRAV*RALQYLWRTRDLGITYGGEPGGGTKLSAWIDADCGAYPDTRRSVSGGAVMMDGGAISWFSRVQKVTGAASSESEYVALAEILNELRFLRHIKEFMTPPIDV--AIKIHEGNEGAIKMVKNRFSSRRTRHVDIKHHIVRYAIE 1434
            T++ EAQ + +WP+W+ AIT EMD   A   + +V R     V+G+R+VF RK D DGSI++ K R+VAQGF Q+ G+   E+ +P    +S+R++L++ A   W   QLDV  AYL  D++EEIY+  P       ++  V  LRK++YG   A   W K +   +   G  RS+ D   F +  HG   + +V   VDD+LV  +P   +K +A   + + F + D  + ++ LG ++ RD +AGT++  Q   I T+  +  +   K +  P A GG  L K+  P T   + EM  IPYRE VG  M+ A  TRPDI++A H+LA++  NPG  HW A+ R ++YL  TR+L +TYGG+  G   L+ + DAD G+  DTR SV G     DGGA+SW ++ Q V   +S+E+EY+ +     E  +LR +   +  P     A++++  N+ A+ + +N     RT+H+ I++H +R A+E
Sbjct:  989 TSLREAQEAPDWPKWEEAITVEMDNLRAHSTYDLVVRPVGAHVIGSRLVFHRKRDADGSIKQCKVRVVAQGFGQIPGVDYNETFAPVAKSSSLRIMLALAARFSWPLIQLDVKSAYLNGDLDEEIYMRQPPGTAAQGEEHLVCRLRKSLYGLKQAGRAWYKKYRDAMTTLGMTRSEADHACFWQ--HGGDSLAMVGTIVDDMLVTGTPDLVEKFRA--GIKAEFTVTDAGDVAWLLGIEVVRDLDAGTVRLAQRSAIDTLMRAMHLEGAKPASTPIAVGG-VLDKTQCPTTASAIAEMSGIPYREGVGMCMYIAVTTRPDIAYAVHRLAQYMSNPGRPHWEALKRLVRYLIGTRELWLTYGGDASG---LAGYTDADWGSSDDTRHSVCGYVYTFDGGAVSWSAKKQNVVALSSTEAEYIGITHATKEAIWLRALLGDLIDPSFATHAVRLYSDNKSAMDLARNNAFHSRTKHIAIRYHFIREAVE 1466          
BLAST of mRNA_H-elongata_contig17147.4403.1 vs. uniprot
Match: A0A6A3Q908_9STRA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=8 Tax=Phytophthora TaxID=4783 RepID=A0A6A3Q908_9STRA)

HSP 1 Score: 283 bits (724), Expect = 4.820e-85
Identity = 175/488 (35.86%), Postives = 271/488 (55.53%), Query Frame = 1
Query:    4 TMGEAQASSEWPQWKRAITREMDGQIARGVWQVVERTKRKTVLGTRVVFKRKIDKDGSIEKYKCRLVAQGFRQVKGIHCEESSSPTPV*ASIRMILSMIAALGWEARQLDVDMAYLEVDVEEEIYVELPEAY---CDSRKQVG------LLRKAMYGRVHAALLW*KTFGIELEAKGFQRSQVDPYEFRRILHGAVVVVIVVYVDDLLVASPTKRDKEQAVRDLCSCFPIKDLAEASYYLGCDITRDRNAGTLKFDQHQYIQTMAESFGV--TKTSIIPSAAGGKALSKSDSPQTDEEVEEMCHIPYREIVGALMWAATMTRPDISFAAHQLAKFNDNPGPTHWRAV*RALQYLWRTRDLGITYGGEPGGGTKLSAWIDADCGAYPDTRRSVSGGAVMMDGGAISWFSRVQKVTGAASSESEYVALAEILNELRFLRHI-KEFMTPPIDVAIKIHEGNEGAIKMVKNRFSSRRTRHVDIKHHIVRYAI 1431
            T  EA    +  +WK+AI  E+   I    W++V +   +  +G R VF  K ++ G + +YK RLVA+G+ Q  GI  EE+ SP     S+R +L+   A G E  Q DVD A+L  ++EEEIY+ELPE      D  +  G      +L +++YG   A+ +W +T    L++ GF+ +  DP  + R   G    ++ +YVDD+L+AS  K         +   F IKDL  A + +G +I  D    TL   Q  Y +++ + FG    K  + P   G + L+K+D PQT+E+  +M   PYR +VG+LM+ A  TRPDIS A  +L++F +NPG  HW A  + ++YL +T+D+GI Y G  G  T+  A+ DAD     D RRSVSG  +M+ G  + W S  QK    +S+E+EY+AL++ + E  ++R + KE     +   + I+E N+GA+ + KN     RT+H+DI++H +R  +
Sbjct:   68 TYAEATTRHDQDEWKKAIASELKSLIVNKTWKLVPKPAHQRPIGCRWVFALKRNEKGQVVRYKARLVAKGYSQRHGIDYEEAYSPVAYLNSVRAMLAKCGAEGMEIEQCDVDTAFLYGELEEEIYMELPEGLRELLDLAEAEGEDDVVCMLLQSLYGLKQASRVWNETIDKHLKSTGFEPADADPCVYTR-GEGEGECIVCLYVDDMLIASRQKAVIASVKAGIAEKFRIKDLGRARFIVGIEIDYDMERRTLGISQKAYTESIIKKFGQENAKPCLTPLEPGVQ-LTKADEPQTEEDKAKMKSKPYRSLVGSLMYLACGTRPDISVAVAKLSRFLENPGEKHWDAGIKVVRYLLKTKDVGIVYDGLLG--TQPEAYSDADWAGNRDDRRSVSGMLLMLCGAPVVWRSTFQKTVALSSTEAEYMALSDCVKECVWMRRLLKEIGAEQVGATV-IYEDNQGAMALAKNVGYQARTKHIDIRYHFIREKV 550          
BLAST of mRNA_H-elongata_contig17147.4403.1 vs. uniprot
Match: A0A2G8RWY5_9APHY (Transcription factor n=1 Tax=Ganoderma sinense ZZ0214-1 TaxID=1077348 RepID=A0A2G8RWY5_9APHY)

HSP 1 Score: 296 bits (759), Expect = 5.920e-85
Identity = 180/485 (37.11%), Postives = 266/485 (54.85%), Query Frame = 1
Query:    4 TMGEAQASSEWPQWKRAITREMDGQIARGVWQVVERTKRKTVLGTRVVFKRKIDKDGSIEKYKCRLVAQGFRQVKG--IHCEESSSPTPV*ASIRMILSMIAALGWEARQLDVDMAYLEVDVEEEIYVELPEAYCDSRKQ--VGLLRKAMYGRVHAALLW*KTFGIELEAKGFQRSQVDPYEFRRILHGAVVVVIVVYVDDLLVASPTKRDKEQAVRDLCSCFPIKDLAEASYYLGCDITRDRNAGTLKFDQHQYIQTMAESFGVTKTS--IIPSAAGGKALSKSDSPQTDEEVEEMCHIPYREIVGALMWAATMTRPDISFAAHQLAKFNDNPGPTHWRAV*RALQYLWRTRDLGITYGGEPGGGTKLSAWIDADCGAYPDTRRSVSGGAVMMDGGAISWFSRVQKVTGAASSESEYVALAEILNELRFLRHI-KEFMTPPIDV-AIKIHEGNEGAIKMVKNRFSSRRTRHVDIKHHIVRYAIE 1434
            T+ EA+ S +WPQW+RAI  E D      V+ +VE      ++G+++VF+ K D +G++  +K RLVAQGF QV G   H +E+ +P     SIR ILS+ A   WE RQ+DV  AYL   +EE +Y+ LP  +    +   V  L+K +YG   A   W KT    +E  GF R   D   F +   G   +++   VDDL +   +      AV D+   F + DL +  + LG ++ RDR A T+   Q  YI T+   F + + +   IP    G  L    SP T  + E+M  +PYRE VG+LM+AA  TRPDI+FA   L++F  NPG  HW A+ R L+YL  +R+L + YG    G   L  + DAD G+  + R S+SG    +DGGAISW S+ Q V   +S+E+EY+AL     E  +LR++  + + P +    +++H  N  AI + K+     RT+H+DI+ H +R A++
Sbjct: 1030 TLEEARQSPDWPQWQRAIDAEYDNLRRHDVFDLVEPPPDANIVGSKLVFRVKHDAEGAVSGFKARLVAQGFSQVPGRDYHDDETFAPVSRLPSIRTILSLAARHDWELRQMDVKSAYLNGILEETVYMRLPPGFAPPEQSHLVCRLKKTLYGLKQAGRGWYKTLTAAMENMGFTRCVADHAVFYK-REGESAIIVAASVDDLTITGTSDLVDAFAV-DIKQRFEMSDLGDLHWILGIEVRRDRQARTIAISQRSYIDTIVSRFNLDEAAPLSIP-LQPGSPLGNHQSPSTPRQFEDMRDVPYREAVGSLMYAAMGTRPDITFAVTALSQFMQNPGRAHWDALKRVLRYLKGSRELWLVYGTNNEG---LRGYSDADWGSSTEHRHSISGYVFTLDGGAISWSSKKQNVVALSSTEAEYIALTHATKEAIWLRYVLSDILHPELATFPVRLHSDNRSAIALAKDNAFHSRTKHIDIRFHFIREAVD 1508          
BLAST of mRNA_H-elongata_contig17147.4403.1 vs. uniprot
Match: A0A401GN13_9APHY (Uncharacterized protein n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GN13_9APHY)

HSP 1 Score: 295 bits (754), Expect = 2.090e-84
Identity = 177/483 (36.65%), Postives = 270/483 (55.90%), Query Frame = 1
Query:    4 TMGEAQASSEWPQWKRAITREMDGQIARGVWQVVERTKRKTVLGTRVVFKRKIDKDGSIEKYKCRLVAQGFRQVKGIHCEESSSPTPV*ASIRMILSMIAALGWEARQLDVDMAYLEVDVEEEIYVELPEAYCDSRKQ--VGLLRKAMYGRVHAALLW*KTFGIELEAKGFQRSQVDPYEF-RRILHGAVVVVIVVYVDDLLVASPTKRDKEQAVRDLCSCFPIKDLAEASYYLGCDITRDRNAGTLKFDQHQYIQTMAESFGVTKT-SIIPSAAGGKALSKSDSPQTDEEVEEMCHIPYREIVGALMWAATMTRPDISFAAHQLAKFNDNPGPTHWRAV*RALQYLWRTRDLGITYGGEPGGGTKLSAWIDADCGAYPDTRRSVSGGAVMMDGGAISWFSRVQKVTGAASSESEYVALAEILNELRFLRHIKEFMTPP--IDVAIKIHEGNEGAIKMVKNRFSSRRTRHVDIKHHIVRYAIE 1434
            ++ EA  S+EWP+WK AI +EM    + G + +VE  K   ++G++ VF+ K + +G IE YK RLVAQGF QV GI   E+ +P    ASIR+IL++ A   WE  Q+DV  AYL  D+EEEIY+  P    +  K+  V  L++ +YG   +   + K    EL + G  RS+VD   F  R     ++++I + VDD  +A  TK       R++ + F + DL E  + LG ++ RDR+A TL   Q  YI  +   F +    S+      G  LS    P T  + E+M +IPYRE +G+LM+AA  TRPDI++A   L++F  NPG  HW A  R  +YL  TR+  +T+G    G   +  + DAD G+  + R S+SG   ++DGGA+SW ++ Q V   +S+E+EY+A+     E  +LR +   +  P  +   +++H  N+ AI + K+     RT+H+DI+ H +R  +E
Sbjct:  924 SLNEAMQSTEWPKWKEAIAKEMQNLDSHGTYTLVEPPKNTNIVGSKFVFRIKHNAEGEIESYKARLVAQGFTQVPGIDFNETFAPVAKLASIRLILALAARYDWELHQMDVKGAYLNGDLEEEIYMRQPPGQAEPGKEHLVCRLKRPLYGLKQSGRQFHKKISGELGSMGLTRSKVDHCVFWLRNEEDVLILLIALSVDDSTIAG-TKAAVFWFKREISTRFEMSDLGEMHWILGIEVRRDRDARTLSLSQRAYIDMILTRFNLQDAKSLTTPLDPGTVLSIHQCPSTPRQFEDMKNIPYREAIGSLMYAALGTRPDIAYAVTALSQFMQNPGRPHWEAAKRVFRYLAGTRERWLTFGETTDG---VEGFSDADWGSA-EHRHSISGYVFLLDGGAVSWSAKKQNVVALSSTEAEYIAITHATKEALWLRSLLADVLHPDILRYPVRLHSDNKSAIALAKDDAYHARTKHIDIRFHFIRETVE 1401          
BLAST of mRNA_H-elongata_contig17147.4403.1 vs. uniprot
Match: A0A8K1CTN1_PYTOL (Uncharacterized protein n=2 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CTN1_PYTOL)

HSP 1 Score: 279 bits (713), Expect = 2.100e-84
Identity = 173/470 (36.81%), Postives = 254/470 (54.04%), Query Frame = 1
Query:   22 ASSEWPQWKRAITREMDGQIARGVWQVVERTKRKTVLGTRVVFKRKIDKDGSIEKYKCRLVAQGFRQVKGIHCEESSSPTPV*ASIRMILSMIAALGWEARQLDVDMAYLEVDVEEEIYVELPEAYCDSRKQVGLLRKAMYGRVHAALLW*KTFGIELEAKGFQRSQVDP--YEFRRILHGAVVVVIVVYVDDLLVASPTKRDKEQAVRDLCSCFPIKDLAEASYYLGCDITRDRNAGTLKFDQHQYIQTMAESFGVTKTSIIPSAAGGKA-LSKSDSPQTDEEVEEMCHIPYREIVGALMWAATMTRPDISFAAHQLAKFNDNPGPTHWRAV*RALQYLWRTRDLGITYGGEPGGGTKLSAWIDADCGAYPDTRRSVSGGAVMMDGGAISWFSRVQKVTGAASSESEYVALAEILNELRFLRHIKEFMTPPIDVAIKIHEGNEGAIKMVKNRFSSRRTRHVDIKHHIVR 1422
            A  E  QW +A+  E D     G W  V+R     V+ T+ VF +K ++ G I ++K RLVA GF Q+ G+   E+ +      SIR+ LS+  A G+   QLDVD A+L  D++E++Y+E PE       +V  L KA+YG   A   W KT    L   GF+    D   Y  R    G     I +YVDD++V   T+   ++  + + + F IK+L    + LG +I  DR    L  +Q  Y++T+ E F       + +       LSK+D P+ D++  EM   PYR ++G L + A  TRPDI+FA   L++F +NPGP HW A  R L+YL  TRD GI+YGG+    T +  + DAD G   D RRSVSG  +MM+GG I + ++ Q     +SSE+EY+AL+    E+ ++R +   +   I   I++ E N+GAI +  N     RT+H+DI+HH VR
Sbjct:    2 ACDEKEQWLKAVKAEFDAHSRNGTWTKVKRQTWMKVIKTKWVFAKKFNEHGDILRWKARLVALGFLQLFGVDFFETYAAVASMGSIRIFLSVCCAAGYILEQLDVDTAFLNADLKEDVYIEPPEGLKVDGDRVLKLNKALYGLKQAGNAWFKTIHGALIDLGFKPCGSDTCIYVGRA---GGDTTYICLYVDDMVVGGRTQTRVDEVKKLIAARFRIKELGPVKHLLGMEIVYDRVKRYLSINQAHYVKTLVERFNQQSCRDVTNPCEQSLKLSKADGPRDDQQKAEMSKRPYRSLIGCLQYVAQCTRPDIAFAVTHLSRFMENPGPRHWTAAIRVLRYLKSTRDYGISYGGDHEENTPV-VFCDADWGTSVDDRRSVSGLVIMMNGGPIVFKAKYQSTVALSSSEAEYLALSLCGQEVMWVRTMLHDLGINIKKPIQVWEDNQGAIALAHNAGYHARTKHIDIRHHYVR 467          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig17147.4403.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A4Y9ZVS1_9AGAM2.970e-8935.83Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A060SPD4_PYCCI3.810e-8736.04Integrase catalytic domain-containing protein n=1 ... [more]
A0A5K1K0E1_9APHY1.040e-8635.40Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A2R6PCF8_9APHY5.660e-8636.65Uncharacterized protein n=1 Tax=Hermanssonia centr... [more]
A0A401GP19_9APHY1.050e-8535.40Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A1M2V8C6_TRAPU3.940e-8536.83Retrovirus-related Pol polyprotein from transposon... [more]
A0A6A3Q908_9STRA4.820e-8535.86Retrovirus-related Pol polyprotein from transposon... [more]
A0A2G8RWY5_9APHY5.920e-8537.11Transcription factor n=1 Tax=Ganoderma sinense ZZ0... [more]
A0A401GN13_9APHY2.090e-8436.65Uncharacterized protein n=1 Tax=Sparassis crispa T... [more]
A0A8K1CTN1_PYTOL2.100e-8436.81Uncharacterized protein n=2 Tax=Pythium oligandrum... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig17147contigH-elongata_contig17147:2739..4260 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score74.7
Seed ortholog evalue3.3e-11
Seed eggNOG ortholog164328.Phyra85518
EggNOG free text desc.GAG-pre-integrase domain
EggNOG OGs3QH4V@4776,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons1
Model size1522
Cds size360
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig17147.4403.1prot_H-elongata_contig17147.4403.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig17147 3900..4259 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929998.5075855-UTR-H-elongata_contig17147:2738..38991622929998.5075855-UTR-H-elongata_contig17147:2738..3899Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig17147 2739..3899 +
1691679240.2333043-UTR-H-elongata_contig17147:2738..38991691679240.2333043-UTR-H-elongata_contig17147:2738..3899Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig17147 2739..3899 +
1622929998.5498116-UTR-H-elongata_contig17147:4259..42601622929998.5498116-UTR-H-elongata_contig17147:4259..4260Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig17147 4260..4260 +
1691679240.2671366-UTR-H-elongata_contig17147:4259..42601691679240.2671366-UTR-H-elongata_contig17147:4259..4260Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig17147 4260..4260 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929998.5311122-CDS-H-elongata_contig17147:3899..42591622929998.5311122-CDS-H-elongata_contig17147:3899..4259Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17147 3900..4259 +
1691679240.2478292-CDS-H-elongata_contig17147:3899..42591691679240.2478292-CDS-H-elongata_contig17147:3899..4259Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17147 3900..4259 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig17147.4403.1

>prot_H-elongata_contig17147.4403.1 ID=prot_H-elongata_contig17147.4403.1|Name=mRNA_H-elongata_contig17147.4403.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=120bp
MMDGGAISWFSRVQKVTGAASSESEYVALAEILNELRFLRHIKEFMTPPI
DVAIKIHEGNEGAIKMVKNRFSSRRTRHVDIKHHIVRYAIEGESGSRRIR
SVQGTTRRHPHEVRRRQDI*
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mRNA from alignment at H-elongata_contig17147:2739..4260+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig17147.4403.1 ID=mRNA_H-elongata_contig17147.4403.1|Name=mRNA_H-elongata_contig17147.4403.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1522bp|location=Sequence derived from alignment at H-elongata_contig17147:2739..4260+ (Himanthalia elongata Himel1 dioecious)
ACAACCATGGGCGAGGCGCAAGCGTCGTCGGAGTGGCCGCAATGGAAAAG GGCGATCACGCGCGAGATGGATGGGCAAATTGCTCGAGGCGTGTGGCAGG TGGTGGAGCGCACAAAAAGGAAGACGGTGTTGGGCACGAGAGTAGTTTTC AAGCGAAAAATCGACAAGGATGGAAGTATCGAGAAGTATAAATGTCGTCT CGTGGCGCAGGGTTTCAGGCAGGTCAAAGGCATACACTGCGAGGAATCCT CCTCTCCGACTCCTGTGTAGGCCAGCATTAGGATGATACTCAGCATGATC GCGGCTCTTGGCTGGGAGGCGCGGCAGCTAGACGTCGACATGGCCTACCT GGAGGTCGATGTGGAGGAGGAGATCTACGTTGAGCTCCCGGAGGCGTATT GTGACTCTAGAAAGCAAGTCGGCCTACTAAGGAAGGCAATGTACGGACGT GTCCACGCCGCGCTGCTCTGGTAAAAAACGTTCGGAATCGAGCTCGAGGC GAAGGGTTTTCAGAGATCTCAAGTCGACCCATACGAGTTCCGGCGGATTC TCCACGGGGCAGTGGTAGTCGTCATCGTGGTCTACGTCGACGACCTGCTG GTTGCTAGTCCGACGAAACGTGACAAGGAGCAAGCGGTAAGGGACCTGTG CTCCTGTTTCCCCATCAAGGATCTGGCGGAGGCTTCATATTACCTGGGAT GTGACATCACGCGGGACCGGAACGCCGGGACGCTGAAGTTCGACCAGCAT CAGTACATACAGACTATGGCGGAAAGTTTTGGCGTGACGAAGACCAGTAT CATCCCGTCTGCGGCAGGAGGAAAAGCCCTTTCGAAATCAGACAGCCCGC AAACGGACGAAGAGGTTGAAGAAATGTGCCATATTCCCTACCGAGAAATC GTTGGGGCCCTGATGTGGGCAGCGACGATGACCAGACCCGACATTTCATT CGCTGCACACCAACTGGCGAAATTCAACGACAACCCGGGGCCGACACACT GGAGGGCAGTCTAGAGAGCGCTGCAATATTTATGGCGCACTCGGGACCTC GGGATCACCTACGGAGGGGAACCGGGGGGGGGAACCAAGTTATCAGCGTG GATCGACGCAGACTGCGGCGCCTACCCGGACACGCGTCGCTCAGTGTCGG GGGGGGCGGTGATGATGGATGGCGGGGCCATTAGTTGGTTCTCGCGAGTG CAAAAGGTAACGGGGGCGGCATCGTCCGAATCGGAATACGTCGCGCTGGC TGAGATATTAAACGAGTTGCGTTTTCTACGACATATCAAAGAGTTCATGA CCCCCCCAATCGACGTCGCCATCAAGATACACGAGGGCAACGAAGGGGCA ATCAAGATGGTGAAAAACCGCTTCAGCAGTCGACGAACGAGGCACGTGGA CATCAAGCATCACATTGTCCGCTACGCGATCGAGGGGGAGAGTGGTTCAC GTAGAATACGTTCGGTCCAGGGAACAACACGCAGACATCCTCACGAAGTC CGTAGACGTCAAGACATTTGAG
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Coding sequence (CDS) from alignment at H-elongata_contig17147:2739..4260+

>mRNA_H-elongata_contig17147.4403.1 ID=mRNA_H-elongata_contig17147.4403.1|Name=mRNA_H-elongata_contig17147.4403.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=720bp|location=Sequence derived from alignment at H-elongata_contig17147:2739..4260+ (Himanthalia elongata Himel1 dioecious)
ATGATGGATGGCGGGGCCATTAGTTGGTTCTCGCGAGTGCAAAAGGTAAC
GGGGGCGGCATCGTCCGAATCGGAATACGTCGCGCTGGCTGAGATATTAA
ACGAGTTGCGTTTTCTACGACATATCAAAGAGTTCATGACCCCCCCAATC
GACGTCGCCATCAAGATACACGAGGGCAACGAAGGGGCAATCAAGATGGT
GAAAAACCGCTTCAGCAGTCGACGAACGAGGCACGTGGACATCAAGCATC
ACATTGTCCGCTACGCGATCGAGGGGGAGAGTGGTTCACGTAGAATACGT
TCGGTCCAGGGAACAACACGCAGACATCCTCACGAAGTCCGTAGACGTCA
AGACATTTGAATGATGGATGGCGGGGCCATTAGTTGGTTCTCGCGAGTGC
AAAAGGTAACGGGGGCGGCATCGTCCGAATCGGAATACGTCGCGCTGGCT
GAGATATTAAACGAGTTGCGTTTTCTACGACATATCAAAGAGTTCATGAC
CCCCCCAATCGACGTCGCCATCAAGATACACGAGGGCAACGAAGGGGCAA
TCAAGATGGTGAAAAACCGCTTCAGCAGTCGACGAACGAGGCACGTGGAC
ATCAAGCATCACATTGTCCGCTACGCGATCGAGGGGGAGAGTGGTTCACG
TAGAATACGTTCGGTCCAGGGAACAACACGCAGACATCCTCACGAAGTCC
GTAGACGTCAAGACATTTGA
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