mRNA_H-elongata_contig17072.4371.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig17072.4371.1
Unique NamemRNA_H-elongata_contig17072.4371.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig17072.4371.1 vs. uniprot
Match: A0A6H5K098_9PHAE (AST protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K098_9PHAE)

HSP 1 Score: 457 bits (1177), Expect = 1.410e-154
Identity = 214/270 (79.26%), Postives = 246/270 (91.11%), Query Frame = 1
Query:    7 LTNLIENFETRDNDVFVCTYVKSGTTWTQRILSLLQMKGDEPDITYAEAVPWLEAASFGGFLAEMEATNWTLDKIVANTDQRFFKTHANLKDLPCGKAPGVKVIYVCRNPKDVCVSLQHHAKNKPMFEYDGAFSDMLRFFAEGRCENGSWFNHVLEWYEASKADPEHVIFLRYEDMLAEPAKHIQMIADFIGIKTTPEIIEKVVSASSISAMKGSSKANTQKQFNHLRKGGAGGWRDVFTVRQSELFDQLYLDQMRGTDLQMDFGEGLNM 816
            L +LI+ FETRD+DVFVCTYVKSGTTWTQ+I++LL+ KG++ D TYAEAVPWLEAA FGG L E EATNWTLDKIVAN+D+RFFKTHANLKDLPCGKAPGVKVIYVCRNPKDVCVSLQHHA NKPMF+Y G FSDML FFAEGRCENGSWF+HVLEW+EASKADPEHVIFLRYED+LA+P  +++ IADF+GI+TTPEIIEK V+AS+ISAMK S+ ANTQK+ NHLRKGGAGGWRDVF VR+SE FD+LY +QM+G+ L+MDFGEGL+M
Sbjct:   51 LNSLIDTFETRDSDVFVCTYVKSGTTWTQQIINLLRNKGEDGDDTYAEAVPWLEAALFGGKLGEKEATNWTLDKIVANSDKRFFKTHANLKDLPCGKAPGVKVIYVCRNPKDVCVSLQHHATNKPMFQYTGDFSDMLTFFAEGRCENGSWFDHVLEWHEASKADPEHVIFLRYEDILADPPTYVKKIADFVGIETTPEIIEKTVAASTISAMKSSANANTQKEVNHLRKGGAGGWRDVFKVRESEAFDRLYREQMKGSGLEMDFGEGLSM 320          
BLAST of mRNA_H-elongata_contig17072.4371.1 vs. uniprot
Match: D7G187_ECTSI (Aryl sulfotransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G187_ECTSI)

HSP 1 Score: 332 bits (851), Expect = 2.890e-105
Identity = 160/274 (58.39%), Postives = 202/274 (73.72%), Query Frame = 1
Query:   16 LIENFETRDNDVFVCTYVKSGTTWTQRILSLLQMKGDEPDITYAEAVPWLEAASFG-------GFLAEMEATNWTLDKIVANTDQRFFKTHANLKDLPCGKAPGVKVIYVCRNPKDVCVSLQHHAKNKPMFEYDGAFSDMLRFFAEGRCENGSWFNHVLEWYEASKADPEHVIFLRYEDMLAEPAKHIQMIADFIGIKTTPEIIEKVVSASSISAMKGSSKANTQKQFNHLRKGGAGGWRDVFTVRQSELFDQLYLDQMRGTDLQMDFGEGLNM 816
            LI  FE+RD+DVFVCT+ KSGTTW Q+I++LL   G++ +  Y   VPW+E+  F        G   + EA  WTL+KI +N ++RFFK+HANLK LP G A GVKVIYV RNPKDV VSL HH +NK    +DG  SDM+R F +GRCENGSWFNHVLEW+EA++ADPEHV+FL YE++L +    I+ IA F GI+ TPE I K + AS+I AM+ ++K NT+   NH RKGGAGGWRDV+TVR+SE FDQ+Y++QM GT L+MDFGEGL M
Sbjct:   67 LIRTFESRDDDVFVCTFCKSGTTWVQQIITLLLNNGEQGEKNYTSVVPWMESLLFTPSANQPRGPGRDHEAKGWTLEKIKSNPERRFFKSHANLKQLPVGTAKGVKVIYVARNPKDVSVSLYHHVRNKQRDVFDGDESDMIRCFVKGRCENGSWFNHVLEWWEAAQADPEHVLFLHYENLLKDREGSIRKIAQFAGIEHTPETIAKTIQASTIDAMRQNAKVNTRPGENHFRKGGAGGWRDVYTVRESEAFDQIYMEQMEGTGLKMDFGEGLVM 340          
BLAST of mRNA_H-elongata_contig17072.4371.1 vs. uniprot
Match: D8LHM0_ECTSI (Aryl sulfotransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHM0_ECTSI)

HSP 1 Score: 331 bits (848), Expect = 6.220e-105
Identity = 160/279 (57.35%), Postives = 205/279 (73.48%), Query Frame = 1
Query:    1 DHLTNLIENFETRDNDVFVCTYVKSGTTWTQRILSLLQMKGDEPDITYAEAVPWLEAASFGG-------FLAEMEATNWTLDKIVANTDQRFFKTHANLKDLPCGKAPGVKVIYVCRNPKDVCVSLQHHAKNKPMFEYDGAFSDMLRFFAEGRCENGSWFNHVLEWYEASKADPEHVIFLRYEDMLAEPAKHIQMIADFIGIKTTPEIIEKVVSASSISAMKGSSKANTQKQFNHLRKGGAGGWRDVFTVRQSELFDQLYLDQMRGTDLQMDFGEGLNM 816
            D    LI  FETRD+DVFVCT+VKSGTT TQ+I++LL  KG++ +  Y   VPW+E+  F            + EA  WTL+KI +  ++RFFK+H+NLK LP G A G+KVIYV RNPKDV VSL HH ++K    +DG  SDM+R F +GRC+NGSWFNHVLEW+EA++ADPEHV+FL YE+ML EP ++I+ IADF GI+ TPE I K  +AS+I +M+ + KAN +   NHLRKGGAGGWRDV+T R+SE FD++Y+ QM GT L+MDFGEGL M
Sbjct:   54 DATNELIRTFETRDDDVFVCTFVKSGTTLTQQIITLLLNKGEQGEKNYTSVVPWMESLLFRQPENPSPEDERDREAQGWTLEKIKSTPNRRFFKSHSNLKQLPVGSAKGLKVIYVARNPKDVSVSLFHHVRHKQKAVFDGDQSDMIRCFVQGRCQNGSWFNHVLEWWEAAQADPEHVLFLHYENMLKEPEENIRKIADFAGIEHTPETIAKTAAASTIDSMRQNPKANIKPSENHLRKGGAGGWRDVYTARESEAFDEIYMQQMEGTGLRMDFGEGLVM 332          
BLAST of mRNA_H-elongata_contig17072.4371.1 vs. uniprot
Match: D8LJX5_ECTSI (Aryl sulfotransferase, C-terminal Aryl sulfotransferase, N-terminal n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJX5_ECTSI)

HSP 1 Score: 324 bits (831), Expect = 2.790e-102
Identity = 159/273 (58.24%), Postives = 197/273 (72.16%), Query Frame = 1
Query:   16 LIENFETRDNDVFVCTYVKSGTTWTQRILSLLQMKGDEPDITYAEAVPWLEAASF------GGFLAEMEATNWTLDKIVANTDQRFFKTHANLKDLPCGKAPGVKVIYVCRNPKDVCVSLQHHAKNKPMFEYDGAFSDMLRFFAEGRCENGSWFNHVLEWYEASKADPEHVIFLRYEDMLAEPAKHIQMIADFIGIKTTPEIIEKVVSASSISAMKGSSKANTQKQFNHLRKGGAGGWRDVFTVRQSELFDQLYLDQMRGTDLQMDFGEGLNM 816
            LI  FETRD+DVFVCT+ KSGTTW Q+I++LL   G + + +Y+EAVPW+E  +F         + + EA  WTL  I +  D+RF KTHANLK+LP G A G+KVIYV RNPKDVCVSL HH KNK    + G FSD +R F EG   NG WF+HVLEW+EA+ ADPEH++FL YE MLAEP +HI+ IA+F GI  TP+I+ K  +ASS+SAMK + K N      HLRKGGAGGWRD FTVR+SE FD++Y +QM G+ L+MDFGEGL M
Sbjct:   69 LIRTFETRDDDVFVCTFSKSGTTWVQQIITLLLNGGVQGEKSYSEAVPWMEWLTFKFGEHEDPAIRDAEAKGWTLATIKSTPDRRFMKTHANLKNLPAGSAKGLKVIYVARNPKDVCVSLYHHVKNKRPDTFSGEFSDHIRSFVEGSQMNGPWFDHVLEWWEAANADPEHILFLHYEAMLAEPQEHIRKIAEFAGINYTPDILAKADAASSLSAMKRNPKTNLYPSKKHLRKGGAGGWRDSFTVRESEAFDEIYREQMEGSGLRMDFGEGLVM 341          
BLAST of mRNA_H-elongata_contig17072.4371.1 vs. uniprot
Match: D7G0M1_ECTSI (Aryl sulfotransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0M1_ECTSI)

HSP 1 Score: 306 bits (785), Expect = 2.460e-96
Identity = 153/276 (55.43%), Postives = 187/276 (67.75%), Query Frame = 1
Query:    1 DHLTNLIENFETRDNDVFVCTYVKSGTTWTQRILSLLQMKGDEPDITYAEAVPWLEAASF------GGFLAEMEATNWTLDKIVANTDQRFFKTHANLKDLPCGKAPGVKVIYVCRNPKDVCVSLQHHAKNKPMFEYDGAFSDMLRFFAEGRCENGSWFNHVLEWYEASKADPEHVIFLRYEDMLAEPAKHIQMIADFIGIKTTPEIIEKVVSASSISAMKGSSKANTQKQFNHLRKGGAGGWRDVFTVRQSELFDQLYLDQMRGTDLQMDFGEGL 810
            D    LI  FETRD+DVFVCT+ KSGTTW Q+I++LL   G + + TY+E VPWLE  +F      G  +   EA NWTLDK+ +  ++RF K+HANL DLP G A G+KVIYV RNPKDV VSL HH KNK    + G  SDM+R F +GR  NG WF+HVLEW+EA+ ADPEH++FL YE MLAEP +HI+ IADF GIK TP+I+ K               AN      HLRKGGAGGWRD FT  +SE FD++Y +QM G+ LQMDFG+GL
Sbjct:   16 DATNELIRTFETRDDDVFVCTFCKSGTTWVQQIITLLLNGGVQGEKTYSETVPWLEWLTFKFAENDGPAVRYKEAQNWTLDKLKSTPNRRFMKSHANLTDLPVGSAMGLKVIYVARNPKDVVVSLYHHIKNKCPHTFSGDMSDMIRCFVQGREMNGPWFDHVLEWWEAANADPEHILFLHYEAMLAEPQEHIRKIADFAGIKHTPDILAK---------------ANIYNSKKHLRKGGAGGWRDAFTKVESEAFDRIYEEQMEGSGLQMDFGDGL 276          
BLAST of mRNA_H-elongata_contig17072.4371.1 vs. uniprot
Match: F0YEU1_AURAN (Sulfotransfer_1 domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YEU1_AURAN)

HSP 1 Score: 296 bits (759), Expect = 1.180e-92
Identity = 144/267 (53.93%), Postives = 185/267 (69.29%), Query Frame = 1
Query:   16 LIENFETRDNDVFVCTYVKSGTTWTQRILSLLQMKGDEPDITYAEAVPWLEAASFGGFLAEMEATNWTLDKIVANTDQRFFKTHANLKDLPCGKAPGVKVIYVCRNPKDVCVSLQHHAKNKPMFEYDGAFSDMLRFFAEGRCENGSWFNHVLEWYEASKADPEHVIFLRYEDMLAEPAKHIQMIADFIGIKTTPEIIEKVVSASSISAMKGSSKANTQKQFNHLRKGGAGGWRDVFTVRQSELFDQLYLDQMRGTDLQMDFGEGLNM 816
            +I+ FETRD DVF+CTYVK+GTTW Q+I++LL   G++ D +Y E VPWLEA +    LAE EA  +TL+ I A  D RFFK+HA   DLP GKAPGVKVI + RNPKD  VSL HHA +KP F Y G F+  L+ F  G  ENGSWF HV+EW+ AS+ADP+HV++L YE M+ + A  +  IA F+G+    +++ K V+ S++ +M+ + KAN     NHLRKGG GGWRD FTV QS LFD +Y  +M GT L  +FGEGL M
Sbjct:    1 MIDTFETRDTDVFICTYVKAGTTWAQQIVTLLCNGGEQGDKSYGEQVPWLEALAAPETLAEREAPGYTLESIDAMADPRFFKSHATFGDLPRGKAPGVKVIAIARNPKDTVVSLFHHASSKPEFGYKGDFTTFLKVFLSGNAENGSWFKHVVEWHAASRADPDHVLWLTYEAMIDDHAGSVAKIAAFLGLPDAGDVVAKTVANSTMKSMQANKKANIG--MNHLRKGGVGGWRDYFTVTQSNLFDAVYAQKMAGTGLAFNFGEGLTM 265          
BLAST of mRNA_H-elongata_contig17072.4371.1 vs. uniprot
Match: A0A6V1XC27_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1XC27_HETAK)

HSP 1 Score: 296 bits (757), Expect = 1.280e-91
Identity = 145/270 (53.70%), Postives = 188/270 (69.63%), Query Frame = 1
Query:   13 NLIENFETRDNDVFVCTYVKSGTTWTQRILSLLQMKGDEPDITYAEAVPWLEAASFGGFLAEMEATNWTLDKIVANTDQRFFKTHANLKDLPCGKAP--GVKVIYVCRNPKDVCVSLQHHAKNKPMFEYDGAFSDMLRFFAEGRCENGSWFNHVLEWYEASKADPEHVIFLRYEDMLAEPAKHIQMIADFIGIKTTPEIIEKVVSASSISAMKGSSKANTQKQFNHLRKGGAGGWRDVFTVRQSELFDQLYLDQMRGTDLQMDFGEGLNM 816
            +LIENF TRD+DVF+CTYVK+GTTWTQ+I++LL   GD+ D +Y E  PWLEAA+    L   EA   TL+ I      RFFK+HA L +LP G+AP  G+KV+YV RNPKD  VSL HHAKNKP F Y G F   +  F  G CENGSWF+HVL+W+  S+ +P +V+FL+YEDMLA+PA  +  IA+F  +  +P  + K V  SS+  MK S++AN    FNHLRKGG+GGW+D FTV  +ELFDQ+Y  +M G+ L  DFG+G+ +
Sbjct:   49 DLIENFVTRDDDVFICTYVKAGTTWTQQIITLLLNGGDQGDKSYGEQCPWLEAAT-SEMLGPREAPGHTLESIATMDGPRFFKSHATLANLPRGRAPAPGLKVLYVARNPKDTVVSLYHHAKNKPEFGYTGDFKTFVELFLAGACENGSWFSHVLDWWAESQRNP-NVLFLKYEDMLADPAAAVARIAEFCALDASPAAVAKTVQNSSMKKMKESAQANALAAFNHLRKGGSGGWKDSFTVATNELFDQIYAKKMEGSGLTFDFGDGVQV 316          
BLAST of mRNA_H-elongata_contig17072.4371.1 vs. uniprot
Match: A0A6V3BMT7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V3BMT7_HETAK)

HSP 1 Score: 290 bits (742), Expect = 2.220e-89
Identity = 147/274 (53.65%), Postives = 197/274 (71.90%), Query Frame = 1
Query:    7 LTNLIENFETRDNDVFVCTYVKSGTTWTQRILSLLQMKGDEPDITYAEAVPWLEAASFGGFLAEMEATNWTLDKIVANTDQRFFKTHANLKDLPCGKAPGVKVIYVCRNPKDVCVSLQHHAKNKPMFEYDGAFSDMLRFFAEGRCENGSWFNHVLEWYEASKADPEHVIFLRYEDMLAEPAKHIQMIADFIGIKTTPEIIEKVVSASSISAMKGSSKANTQK-QFN---HLRKGGAGGWRDVFTVRQSELFDQLYLDQMRGTDLQMDFGEGLNM 816
            + +LI  FE+R +DVF+CTYVK+GTTWTQ+I  LL+  G++ + TYAE+ PWLEA +    L++ EAT  +L+ I      RFFKTHAN++DLP G     KVIYVCRNPKDV VSL +HAK+KP F ++G    ML+FF EG CENGSWF HVL+W+ AS+ + + ++FL YE M+ +PA  I  IA+FI I+ T E++ KVV  SS+ +MK +S   +Q  +F    H+RKGGAGGWR+ FTVRQSELFD  Y + M+GT L+MDFG+G++M
Sbjct:   47 IEDLINTFESRPDDVFICTYVKAGTTWTQQICHLLRNGGEQGEQTYAESSPWLEAVT-SPILSQWEATGHSLESIATMEGPRFFKTHANIQDLP-GGVERPKVIYVCRNPKDVVVSLLNHAKDKPCFGFNGDLGKMLQFFMEGTCENGSWFKHVLDWWNASQNN-DRILFLHYEQMMEDPAAAITKIAEFINIELTEELLAKVVEKSSLKSMKSNSAVTSQMAKFGITAHIRKGGAGGWRNHFTVRQSELFDLCYGELMKGTGLEMDFGDGVSM 317          
BLAST of mRNA_H-elongata_contig17072.4371.1 vs. uniprot
Match: A0A7S2XZC3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZC3_9STRA)

HSP 1 Score: 289 bits (739), Expect = 1.260e-88
Identity = 146/269 (54.28%), Postives = 190/269 (70.63%), Query Frame = 1
Query:    7 LTNLIENFETRDNDVFVCTYVKSGTTWTQRILSLLQMKGDEPDITYAEAVPWLEAASFGGFLAEMEATNWTLDKIVANTDQRFFKTHANLKDLPCGKAPGVKVIYVCRNPKDVCVSLQHHAKNKPMFEYDGAFSDMLRFFAEGRCENGSWFNHVLEWYEASKADPEHVIFLRYEDMLAEPAKHIQMIADFIGIKTTPEIIEKVVSASSISAMKGSSKANTQ-KQFN---HLRKGGAGGWRDVFTVRQSELFDQLYLDQMRGTDLQMDFG 801
            + +L+ NF TRD D F+CT+VK+GTTWTQ+I+ LL   G++ + TYAE +PWLE+ +    L + EA   TL+ +      RFFKTHANL DLP G+A   KVIYV RNPKDV VSL HHAK+KP F+++G FS ML  F EG  ENGSWF HVLEW+E SK   + ++FL+YE M+A+PA H++ IA FIG+  TPE+I  VV  +SI+AMK ++    Q K+F    H+RKGGAGGW++ FTVRQSE FD +Y + M+ T LQ DFG
Sbjct:   70 INDLVSNFNTRDEDTFICTFVKAGTTWTQQIIHLLLNNGEQGEQTYAERIPWLESTT-SPILRQWEAPGHTLETVRDLEGPRFFKTHANLGDLPKGQA-SPKVIYVARNPKDVVVSLFHHAKDKPCFQFNGDFSKMLHMFVEGNAENGSWFKHVLEWHEESKKS-DRILFLQYEAMMADPATHVEKIARFIGLDPTPELIATVVEKTSINAMKKNAAVTDQMKKFGINAHIRKGGAGGWKNWFTVRQSEAFDSIYTEIMKDTGLQFDFG 335          
BLAST of mRNA_H-elongata_contig17072.4371.1 vs. uniprot
Match: A0A6S9GU12_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9GU12_HETAK)

HSP 1 Score: 288 bits (737), Expect = 2.490e-88
Identity = 144/271 (53.14%), Postives = 190/271 (70.11%), Query Frame = 1
Query:   13 NLIENFETRDNDVFVCTYVKSGTTWTQRILSLLQMKGDEPDITYAEAVPWLEAASFGGFLAEMEATNWTLDKIVANTDQRFFKTHANLKDLPCGKAPGVKVIYVCRNPKDVCVSLQHHAKNKPMFEYDGAFSDMLRFFAEGRCENGSWFNHVLEWYEASKADPEHVIFLRYEDMLAEPAKHIQMIADFIGIKTTPEIIEKVVSASSISAMKGSSKANTQKQF---NHLRKGGAGGWRDVFTVRQSELFDQLYLDQMRGTDLQMDFGEGLNM 816
            NLI+NF  RD+DV++CTYVKSGTTW Q+I+ LL+  G+  D +Y+E++PWLEAA+    L++ EAT  T++ I+     R+FKTHANL+DLP   +   KVIYV RNPKDV VSL HHAK+KP F ++G FS ML +F EG CENGSWF HVL+WY  SK +P +V+FL+YEDM A+P   I+ IADF+ +  TPE+I+KV   SS+  M+ ++     K+    +H RKGGAGGW D F VRQS  FD +Y + MRG+ L  +FG  L M
Sbjct:   71 NLIDNFNARDSDVYICTYVKSGTTWCQQIVHLLRNNGELGDKSYSESIPWLEAAT-SPILSQWEATGHTVESIMETEGPRYFKTHANLQDLPGRSSANPKVIYVARNPKDVVVSLLHHAKDKPCFHFNGNFSKMLHYFMEGNCENGSWFKHVLDWYNESKQNP-NVLFLKYEDMTADPPGAIKKIADFLEMDYTPELIQKVTEKSSLKFMQSNTVNAEMKKAGIKSHFRKGGAGGWVDHFNVRQSAAFDAVYRELMRGSGLTFNFGGDLVM 339          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig17072.4371.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K098_9PHAE1.410e-15479.26AST protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
D7G187_ECTSI2.890e-10558.39Aryl sulfotransferase n=2 Tax=Ectocarpus TaxID=287... [more]
D8LHM0_ECTSI6.220e-10557.35Aryl sulfotransferase n=1 Tax=Ectocarpus siliculos... [more]
D8LJX5_ECTSI2.790e-10258.24Aryl sulfotransferase, C-terminal Aryl sulfotransf... [more]
D7G0M1_ECTSI2.460e-9655.43Aryl sulfotransferase n=1 Tax=Ectocarpus siliculos... [more]
F0YEU1_AURAN1.180e-9253.93Sulfotransfer_1 domain-containing protein n=1 Tax=... [more]
A0A6V1XC27_HETAK1.280e-9153.70Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A6V3BMT7_HETAK2.220e-8953.65Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2XZC3_9STRA1.260e-8854.28Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A6S9GU12_HETAK2.490e-8853.14Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig17072contigH-elongata_contig17072:1348..5918 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score285.4
Seed ortholog evalue2.4e-74
Seed eggNOG ortholog2880.D7G187
KEGG koko:K01025
EggNOG free text desc.sulfotransferase activity
EggNOG OGsKOG1584@1,KOG1584@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionP-loop containing nucleoside triphosphate hydrolase
Ec32 orthologEc-01_008810.1
Exons7
Model size1988
Cds size705
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929994.2061677-UTR-H-elongata_contig17072:1347..16131622929994.2061677-UTR-H-elongata_contig17072:1347..1613Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig17072 1348..1613 -
1691679238.608894-UTR-H-elongata_contig17072:1347..16131691679238.608894-UTR-H-elongata_contig17072:1347..1613Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig17072 1348..1613 -
1622929994.22598-UTR-H-elongata_contig17072:1658..25611622929994.22598-UTR-H-elongata_contig17072:1658..2561Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig17072 1659..2561 -
1691679238.6181812-UTR-H-elongata_contig17072:1658..25611691679238.6181812-UTR-H-elongata_contig17072:1658..2561Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig17072 1659..2561 -
1622929994.3087282-UTR-H-elongata_contig17072:5174..51801622929994.3087282-UTR-H-elongata_contig17072:5174..5180Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig17072 5175..5180 -
1691679238.6625862-UTR-H-elongata_contig17072:5174..51801691679238.6625862-UTR-H-elongata_contig17072:5174..5180Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig17072 5175..5180 -
1622929994.3217473-UTR-H-elongata_contig17072:5810..59181622929994.3217473-UTR-H-elongata_contig17072:5810..5918Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig17072 5811..5918 -
1691679238.6697738-UTR-H-elongata_contig17072:5810..59181691679238.6697738-UTR-H-elongata_contig17072:5810..5918Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig17072 5811..5918 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929994.2374487-CDS-H-elongata_contig17072:2561..27681622929994.2374487-CDS-H-elongata_contig17072:2561..2768Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17072 2562..2768 -
1691679238.6255014-CDS-H-elongata_contig17072:2561..27681691679238.6255014-CDS-H-elongata_contig17072:2561..2768Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17072 2562..2768 -
1622929994.2535908-CDS-H-elongata_contig17072:3955..41301622929994.2535908-CDS-H-elongata_contig17072:3955..4130Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17072 3956..4130 -
1691679238.6328514-CDS-H-elongata_contig17072:3955..41301691679238.6328514-CDS-H-elongata_contig17072:3955..4130Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17072 3956..4130 -
1622929994.2651122-CDS-H-elongata_contig17072:4363..44881622929994.2651122-CDS-H-elongata_contig17072:4363..4488Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17072 4364..4488 -
1691679238.6403787-CDS-H-elongata_contig17072:4363..44881691679238.6403787-CDS-H-elongata_contig17072:4363..4488Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17072 4364..4488 -
1622929994.282449-CDS-H-elongata_contig17072:4686..47941622929994.282449-CDS-H-elongata_contig17072:4686..4794Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17072 4687..4794 -
1691679238.6475585-CDS-H-elongata_contig17072:4686..47941691679238.6475585-CDS-H-elongata_contig17072:4686..4794Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17072 4687..4794 -
1622929994.2953315-CDS-H-elongata_contig17072:5084..51741622929994.2953315-CDS-H-elongata_contig17072:5084..5174Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17072 5085..5174 -
1691679238.655385-CDS-H-elongata_contig17072:5084..51741691679238.655385-CDS-H-elongata_contig17072:5084..5174Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17072 5085..5174 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig17072.4371.1prot_H-elongata_contig17072.4371.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig17072 2562..5174 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig17072.4371.1

>prot_H-elongata_contig17072.4371.1 ID=prot_H-elongata_contig17072.4371.1|Name=mRNA_H-elongata_contig17072.4371.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=235bp
MKGDEPDITYAEAVPWLEAASFGGFLAEMEATNWTLDKIVANTDQRFFKT
HANLKDLPCGKAPGVKVIYVCRNPKDVCVSLQHHAKNKPMFEYDGAFSDM
LRFFAEGRCENGSWFNHVLEWYEASKADPEHVIFLRYEDMLAEPAKHIQM
IADFIGIKTTPEIIEKVVSASSISAMKGSSKANTQKQFNHLRKGGAGGWR
DVFTVRQSELFDQLYLDQMRGTDLQMDFGEGLNM*
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mRNA from alignment at H-elongata_contig17072:1348..5918-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig17072.4371.1 ID=mRNA_H-elongata_contig17072.4371.1|Name=mRNA_H-elongata_contig17072.4371.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=4571bp|location=Sequence derived from alignment at H-elongata_contig17072:1348..5918- (Himanthalia elongata Himel1 dioecious)
GACCATTTGACAAACTTGATCGAGAACTTCGAAACCCGGGACAACGATGT GTTCGTCTGCACATACGTAAAGTCCGGAACCACGTGGACTCAGAGGATAT TATCTCTGGTGAGTCAAGTCGATTCGCCACGGAATTGCGCACGTAACTGA CGTGCCCTAAATGCGTCTTCTCTCTCTTTATCCCAACCTTTGGGGGACTT CTTTGGGGGGCTTATCAGTGGTCAGTGTCACTTTGGGGGGCTAAGTGAAA GCTACACTTCGTGGATGGATCACGAGCTATAGATTTCCAAGTAGAATCGT AACAAGGCTTACCCATCGAACCCACGTTAGTTTTCTTCCGCATCCTCCGT GAGATGGTTGACGGGCGAAACTTAAATTCGAACGATACAGGATCGTATGC AGGATCGCATTTGAGCGGCGTCACGACGAAAGGAGGTTTGAGCAATATAA TATATAGCCTTCACTCGATGCCAACATCACTTGGATTGCAACTTCCATGT GTGGTTATCAGACCCTTGATATGTGGTTGTTGAGAAGATGATCCATTGGT AATTTTTTACTCACATATTGGGAGCTTGCGTCAAAGACTCTATCTGGGCT TCGTTGCTGAGCGTTGCTCGTGCAGGTGTAGAGGCGATCACTTAAAACTG AACCCATGAAACATTCCATGGTAGCCTTCATCGAAATCAACCCGTCCTCG ATAAACTCTCGCCTTTTCGACATGTGTTGTTCCCTTAGCTCCAAATGAAG GGAGATGAGCCAGACATTACGTACGCGGAAGCGGTACCGTGGCTCGAGGC TGCCTCGTTTGGGGGATTCCTTGCTGAGATGGAGGTATGCGCAATCTCGC TCGCGGTAATTTCCACCATAACTTAGGAAATGTTTTGACAGTTTTGTCGA TCGTTGGCAGGTAGAAGGTCAGTGTTGCTACCCCCAACCAGCTGCCGTGA TCGTGGTTATCGAAAGGGTGAGGCATATTCTCCACCTCTGGGCTTGTTTA GATGTTGCTTGGTCGTACAGCTTCCATGGATCTGGGGCATGCATCAACTG GGGACAAGAGAAAATCAGACGGTATTTCGTAGCCGATAATATCTCACCGA AAGTCTGCCGCTTGTACCTCGCAGGCGACCAATTGGACCTTGGACAAGAT CGTTGCCAACACCGACCAACGTTTCTTCAAGACCCATGCCAACCTGAAGG ATCTCCCCTGTGGAAAAGCGCCGGGGGTTAAGGTACATCGATGCACAGAA GCGCTACGGGCCGGCGGCCGCTGTATGCCGACAACGCTCGGTTTCCATAT CTCCAAATCAGCGCTGTTAGCAAGGCCAACTGTGAACTGTAACATGATCT CGAGGCGAAAAGGTCGATTCGAATGTAATCTCCCCAATTGGAAATTTGGT GTCGTTGTTTTCATTACTTCTGCGCAATAGGTGATTTATGTATGCCGGAA CCCGAAGGACGTGTGCGTGTCTCTACAGCACCACGCCAAAAACAAGCCCA TGTTCGAGTACGATGGGGCTTTCAGCGATATGCTGCGCTTCTTTGCAGAG GGCAGGTGAAACTAGATCAAGAGGAAGAGTGAAGCGTGCGTTCTAAATGT GCATCGTGTTGTAGAAAACAATGGTCAGTGGAGGGATACCAGCGGTCAGG GGGGTATAAGTGTTGTGCGCGCCGCTCGATAGTGAGTGTGGCATCCAAGG GCTTTGATTCAACGAGTAATAAGAGTCGTTTGCCTGGCCCTCCCAGTCTC CAACCCAACGCACACAAAAATGATCGCGTGCTCTCTAGATGCGAGAACGG CTCCTGGTTCAACCATGTCTTAGAGTGGTATGAGGCGTCAAAGGCGGATC CGGAGCACGTTATCTTCCTCCGGTACGAAGATATGCTCGCGGAACCGGCG AAGCACATCCAGATGATTGCAGACTTCATCGGAATCAAGACCACCCCGGA GATAATCGAAAAGGTGGGGAGAAATAAACATGCGTACTGGTCCAGGGAAA ACCTTCTTGAAACAGGCTACTAAATACAAAAACCTGAACTGGTCTATCTA TGATTTTACTGTATTGTTTATTTATTTACTTCGTACTTTTTTTCATCCAA GTTTCGGCACGCTTATGGTATGGAAAAAAATAAATCCCCGAAGTAAAGAA AACAAACACAGCGATGGTCTCGTGTACACACAAGTTCGCACGCGCTCGCG ACGAAAAGTGAAAAGGAAGACGAAGTATCGCGTTTGGCACCGTCGCCATA AGCTGCTGGAGCGTATCTGTGTGGAAAACGTGGTTTGGAGTTGCATATGG AGCATGTAAAGTGTTGCTATCGTATTTTCGTTCGTTTTTTTCCCTATCCA GAATGGCAACCATGAAACCGGAATGGCAACCACATACAGTAGTTGAGTTT AAATTACACACACGCGCAGGCGTGAACACGTTTGCGTGTTTGGTTGATGA TTTAGCGCGCTGCGAATGTAGTGAATGTATACCTCGTACTGAACCTTGTT ATCTAGTATTCCTAGGTTATATCCACTTTGCTGCTCTTGTTATGTACCGG TTTACCACCAGCTGACGGATACCGGTGGAACGGAGGTAGGATGTACGACC TACGTACGCTATGACGTGTTTCTATCTTTTTACCATTCATTGGTCCTATA ATCCGTCATACATTTGGTGACTGGTAACAATCCACGAGTCACCAGGTAAC TGAACTAATAGGCGCGCATCAGTGTGCTGAGGAATAGGTCTTACCGGTAC ACGCAGCTCTTATGAGGAAATGAAGGCCGTCATTCGTTTTAAGTGTGTCA CTGCCGGCGCCTTGACACCGTTCATTGTTTTGCGATCCCACATTAACGCC GGAAGCATTACGACCATCCTGTTATTATTGTCTGGAATGGCCGTCTTGGT GTTGTTTTTTCGATGCGTCGCGGTTGCTTCACACGCCGAAGAGAATTCCG TTCGGGAGTCGGTGTCCGTAGCGCATGTGCAATCGCGCAGTGACCACTTC CAGGTTTGCTTAACGCTGCGTAACCGTTTTGCCTATCACCGCTTTGTTTG TGATATTATTTATTCTTCAATCCCCACATGCATGTTTTGCTCATGTTTAC CTTTTTGTGACCCCACGCCTTTGTTGCCTTTGTTGCCTTTGTTTCCGTAG GTGGTTTCCGCCTCCTCCATCTCGGCGATGAAGGGCAGTTCCAAAGCGAA CACTCAAAAACAATTCAACCACCTGCGAAAAGGTGGCGCGGGTGGGTGGC GCGACGTCTTCACAGTGCGTCAATCCGAATTATTCGACCAGCTATACCTC GACCAGATGAGGGGCACAGACTTACAGATGGATTTTGGTGAAGGGCTTAA CATGTGAATGCAGTCGTGAAACAGAAAGCAAGATCGAGCGAACTTGTGCG GTTCAACGTCGCGTTTCATGTGTCACCCTACTTTAGTCCCCTCGGGAAGA GACGGATGGGTTCTCCTGCATGCTAAGCGATTGATTTTTTTGCCGGGGCC GCTATCCTGGCAGTACTTGTAGCGAGGAAGGCCCCCCTCGTACTCTAGCT TCGCCTGTATCATATTTTATATTTTTGAAGAGAAATAAACGATATAAAAT TATACGCGAAATATATTGGCTTCGCATATATAAAGCGAATAATGCATCTC AAGTGCTACGTTTTTTTTCGACAAATCATGCGCGAGAGTCCTGGTCGGCT GTTTGGCGGCAGTACTCTTGGTGATGGAACATATAGAGGCGGCTCCCGTT CGAAAAATCTCGTAATCGCTTCATCTTGGTAGGACCGTTCGCCGTCGCCT AATTTGTAAGAAGGGGGTACTTTGTTTAATCCTTTTCGCCACAAGCTAGC GATGGAATCATAATAGTGGCACACATCGCATTCTGTGCAAATTAGACCAT TTTGGAATTTACAAAAGGATAAATTGCTTTCCCCCCCAATCGGTTCTGGT CAAGAGATCCATTTCAATCCACGCGCAGGGAAAATCGATCATTCATTGGT GTCTGGGATATTTTTCTTAAAAAAGAACACGAACTCATTCCAACCCTCCG AACATCCACGCGTCCAGGAGACCAACTATCATCAGGTTCGAATGTGTGGC ATTACTACCTTTGAACACAAAATCGTCAAATTGACATTAATCATCCGGTC AACGGTATATAATGTCGGGGATTCCATTACTATCCCGTACATTTATACCG GTATTATTTATAACGTGAGAATGTAAACCAGAGCCTAGAGAGTGAACTGT AGAAGAGGGGGTGCGGGAGAGAGCAAAAGAGAATAAGTAATACGATGAAC TATAGGATATTAAGAACTAGGATACATAAGGGGAGGTATTGGCAAACCGG CGTGGCGCCCCCTTACGTATCATGCCGGTTTGCGCGGTCTAATGCAAATT GATAAAAAGAATGAGAACATATTTTACGAAGTAGTAACATGTGGTACTTA TTCCAACCCTCCGAACATCCACGCCTTCATAGCACCGTGAGAGGTGCAGT CCAGAGGACAACTTATCAGGTTTGAATGTTAACATATATATATATATACA GTTTGATTTTGGGTTATGGCT
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Coding sequence (CDS) from alignment at H-elongata_contig17072:1348..5918-

>mRNA_H-elongata_contig17072.4371.1 ID=mRNA_H-elongata_contig17072.4371.1|Name=mRNA_H-elongata_contig17072.4371.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1410bp|location=Sequence derived from alignment at H-elongata_contig17072:1348..5918- (Himanthalia elongata Himel1 dioecious)
ATGAAGGGAGATGAGCCAGACATTACGTACGCGGAAGCGGTACCGTGGCT
CGAGGCTGCCTCGTTTGGGGGATTCCTTGCTGAGATGGAGATGAAGGGAG
ATGAGCCAGACATTACGTACGCGGAAGCGGTACCGTGGCTCGAGGCTGCC
TCGTTTGGGGGATTCCTTGCTGAGATGGAGGCGACCAATTGGACCTTGGA
CAAGATCGTTGCCAACACCGACCAACGTTTCTTCAAGACCCATGCCAACC
TGAAGGATCTCCCCTGTGGAAAAGCGCCGGGGGTTAAGGCGACCAATTGG
ACCTTGGACAAGATCGTTGCCAACACCGACCAACGTTTCTTCAAGACCCA
TGCCAACCTGAAGGATCTCCCCTGTGGAAAAGCGCCGGGGGTTAAGGTGA
TTTATGTATGCCGGAACCCGAAGGACGTGTGCGTGTCTCTACAGCACCAC
GCCAAAAACAAGCCCATGTTCGAGTACGATGGGGCTTTCAGCGATATGCT
GCGCTTCTTTGCAGAGGGCAGGTGATTTATGTATGCCGGAACCCGAAGGA
CGTGTGCGTGTCTCTACAGCACCACGCCAAAAACAAGCCCATGTTCGAGT
ACGATGGGGCTTTCAGCGATATGCTGCGCTTCTTTGCAGAGGGCAGATGC
GAGAACGGCTCCTGGTTCAACCATGTCTTAGAGTGGTATGAGGCGTCAAA
GGCGGATCCGGAGCACGTTATCTTCCTCCGGTACGAAGATATGCTCGCGG
AACCGGCGAAGCACATCCAGATGATTGCAGACTTCATCGGAATCAAGACC
ACCCCGGAGATAATCGAAAAGATGCGAGAACGGCTCCTGGTTCAACCATG
TCTTAGAGTGGTATGAGGCGTCAAAGGCGGATCCGGAGCACGTTATCTTC
CTCCGGTACGAAGATATGCTCGCGGAACCGGCGAAGCACATCCAGATGAT
TGCAGACTTCATCGGAATCAAGACCACCCCGGAGATAATCGAAAAGGTGG
TTTCCGCCTCCTCCATCTCGGCGATGAAGGGCAGTTCCAAAGCGAACACT
CAAAAACAATTCAACCACCTGCGAAAAGGTGGCGCGGGTGGGTGGCGCGA
CGTCTTCACAGTGCGTCAATCCGAATTATTCGACCAGCTATACCTCGACC
AGATGAGGGGCACAGACTTACAGATGGATTTTGGTGAAGGGCTTAACATG
TGAGTGGTTTCCGCCTCCTCCATCTCGGCGATGAAGGGCAGTTCCAAAGC
GAACACTCAAAAACAATTCAACCACCTGCGAAAAGGTGGCGCGGGTGGGT
GGCGCGACGTCTTCACAGTGCGTCAATCCGAATTATTCGACCAGCTATAC
CTCGACCAGATGAGGGGCACAGACTTACAGATGGATTTTGGTGAAGGGCT
TAACATGTGA
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