prot_H-elongata_contig105212.435.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig105212.435.1
Unique Nameprot_H-elongata_contig105212.435.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length201
Homology
BLAST of mRNA_H-elongata_contig105212.435.1 vs. uniprot
Match: A0A6H5KN26_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN26_9PHAE)

HSP 1 Score: 210 bits (534), Expect = 2.910e-59
Identity = 114/201 (56.72%), Postives = 141/201 (70.15%), Query Frame = 0
Query:    1 MDQHPMSVIFKAVQGAPSGFTLGDIENAGVCTILDGNHRVAALRQIKGDDFLVPCQCYSDIEDANVKRIRFIPFCITARCATTNCCSLFLACNDSTSTFAERTIYDRLYFFRFIYDGAESDLKVARRNGRTLYVQDKDLKMYYLKAKQPVPSDQPLRNWLKAVKGISPDALKTLKDLVKSEDKSMDLSLLSLAYISKDVFI 201
            M+  P+SVIFK V  AP  FT  D + AG  ++LDGNHR+ AL+ +K  DFLVPCQCYSDI+DANVKRI                  +  ACND+TSTFAERTIYDRLYFF  +Y GA++ L+ +R   R   V  KD+K +Y KAKQ VPSD  LR+WLKAV+GI  +AL  LKDLV+SEDKS+DL+L++LAYISKD F+
Sbjct:   36 MENQPLSVIFKGVHQAP--FTQEDADKAGPASVLDGNHRLVALKAVKPGDFLVPCQCYSDIKDANVKRI------------------VADACNDATSTFAERTIYDRLYFFSSLYKGAQASLETSRSRSRQ--VNPKDIKEFYAKAKQAVPSDSTLRSWLKAVRGIKEEALTALKDLVESEDKSIDLNLVTLAYISKDDFM 214          
BLAST of mRNA_H-elongata_contig105212.435.1 vs. uniprot
Match: D7G124_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G124_ECTSI)

HSP 1 Score: 160 bits (404), Expect = 1.450e-43
Identity = 89/160 (55.62%), Postives = 110/160 (68.75%), Query Frame = 0
Query:   42 ALRQIKGDDFLVPCQCYSDIEDANVKRIRFIPFCITARCATTNCCSLFLACNDSTSTFAERTIYDRLYFFRFIYDGAESDLKVARRNGRTLYVQDKDLKMYYLKAKQPVPSDQPLRNWLKAVKGISPDALKTLKDLVKSEDKSMDLSLLSLAYISKDVFI 201
            A + +   DFLVPCQCYSDI+DANVKRI                  +  ACND+TSTFAERTIYDRLYFF  +Y GA++ L+ +R   R   V  KD+K  Y KAKQ VPSD  LR+WLKAV+GI  +AL  L+DLV+SEDKS+DL+L++LAYISK  F+
Sbjct:  149 APKAVMPGDFLVPCQCYSDIKDANVKRI------------------VADACNDATSTFAERTIYDRLYFFSSLYKGAQASLETSRSRSRQ--VNPKDIKELYAKAKQAVPSDSTLRSWLKAVRGIKEEALTALEDLVESEDKSVDLNLVTLAYISKVDFM 288          
BLAST of mRNA_H-elongata_contig105212.435.1 vs. uniprot
Match: D8LJG8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJG8_ECTSI)

HSP 1 Score: 79.7 bits (195), Expect = 7.560e-14
Identity = 41/63 (65.08%), Postives = 52/63 (82.54%), Query Frame = 0
Query:  139 LKMYYLKAKQPVPSDQPLRNWLKAVKGISPDALKTLKDLVKSEDKSMDLSLLSLAYISKDVFI 201
            L +  L+AKQ VPSD  LR+WLKAV+GI  +AL  LKDLV+SEDKS+DL+L++LAYISKD F+
Sbjct:   13 LSLSLLQAKQAVPSDSTLRSWLKAVRGIKEEALTALKDLVESEDKSIDLNLVTLAYISKDDFM 75          
BLAST of mRNA_H-elongata_contig105212.435.1 vs. uniprot
Match: A0A6H5K2Z9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2Z9_9PHAE)

HSP 1 Score: 65.1 bits (157), Expect = 7.500e-9
Identity = 49/152 (32.24%), Postives = 70/152 (46.05%), Query Frame = 0
Query:   33 ILDGNHRVAALRQIKGDDFLVPCQCYSDIEDANVKRIRFIPFCITARCATTNCCSLFLACNDSTSTFAERTIYDRLYFFRFIYDGA---ESDLKVARR---NGRTL-YVQDKDLKMYYLKAKQPVPSDQPLRNWLKAVKGISPDALKTLKDL 177
            ++DGNHR+AA +++ G+D L+ C CY  I D   ++I                      CN +T+TF  RTIYD+LYF+  +       ES+   ARR   N R+   V    L   +  A    P+   LR W+  V   S  AL  L+ L
Sbjct:  112 VIDGNHRLAACKEVYGEDRLIRCTCYRFIADGFARQIASD------------------VCNVTTATFQARTIYDQLYFYNRMMTSLMAQESESSSARRRPSNSRSKPSVTAAKLATCWKGAGSQAPAANTLRQWISIVNDTSQGALVALRAL 245          
BLAST of mRNA_H-elongata_contig105212.435.1 vs. uniprot
Match: A0A6H5KJN8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJN8_9PHAE)

HSP 1 Score: 58.5 bits (140), Expect = 1.290e-6
Identity = 29/79 (36.71%), Postives = 44/79 (55.70%), Query Frame = 0
Query:   33 ILDGNHRVAALRQIKGDDFLVPCQCYSDIEDANVKRIRFIPFCITARCATTNCCSLFLACNDSTSTFAERTIYDRLYFF 111
            ++DGNHR+AA +++ G+D L+ C CY  I D+  ++I                      CN +T+TF  RTIYD+LYF+
Sbjct:  112 VIDGNHRLAACKEVYGEDRLIRCTCYRFIADSFARQIASD------------------VCNVTTATFRARTIYDQLYFY 172          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig105212.435.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5KN26_9PHAE2.910e-5956.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G124_ECTSI1.450e-4355.63Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LJG8_ECTSI7.560e-1465.08Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K2Z9_9PHAE7.500e-932.24Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KJN8_9PHAE1.290e-636.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig105212contigH-elongata_contig105212:863..2242 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig105212.435.1mRNA_H-elongata_contig105212.435.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig105212 733..2242 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig105212.435.1 ID=prot_H-elongata_contig105212.435.1|Name=mRNA_H-elongata_contig105212.435.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=201bp
MDQHPMSVIFKAVQGAPSGFTLGDIENAGVCTILDGNHRVAALRQIKGDD
FLVPCQCYSDIEDANVKRIRFIPFCITARCATTNCCSLFLACNDSTSTFA
ERTIYDRLYFFRFIYDGAESDLKVARRNGRTLYVQDKDLKMYYLKAKQPV
PSDQPLRNWLKAVKGISPDALKTLKDLVKSEDKSMDLSLLSLAYISKDVF
I
back to top