mRNA_H-elongata_contig17025.4350.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig17025.4350.1
Unique NamemRNA_H-elongata_contig17025.4350.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig17025.4350.1 vs. uniprot
Match: D7FPE5_ECTSI (SET and MYND domain containing 1b n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPE5_ECTSI)

HSP 1 Score: 296 bits (759), Expect = 3.460e-89
Identity = 186/466 (39.91%), Postives = 267/466 (57.30%), Query Frame = 2
Query:  305 EILTPTSFNPNPFARRAAKLDKRVVFRVDAAKPERGRGLFATKDVPEGTEVMRVRAVGTVALRVRSAGVCCRCFVQQKRSARLKTCRGCGLSFCTDCAKAF----LNNSAHKAACDFSAGVVRLCSRNGGVEHDEAVLRLVADIFVRKEAGLIDEEEWNLLGSLESGGNESGTIGLSLSLLKDSVRLFRETLRIEVSEGGLQTMYRRVTRNLHAISPVFDDIGSGVTTAQALFPCGALVNHSCQPNALFHCRSRPLSTDG-PVVEHVLRTVSPVKAGEELCVSYITD-FATASISERRRLLQGWGFWCACSRCKNEEREAQEERREKRAR-PGDTKALSCIRNMEKTLQLYARDGAGDIGVKQ-LDQLREAIQFFA-EEGERITPTLRRRLVMSAMHLTLLMDGEADVSRFVALQAAGDELMELKDPGMIDLRYKLYKEALGLREVEPFFEESARRALEDAVAMSK 1675
            E  + +  +P  +ARR A LD RV  R D   P+RGRGLFA +D+P GTEVMRV A   V L     G C  C +       L+ C G  LSFC  C KA     ++   + A C+ +  +  +C+ +GG++ D   LRL AD+FVR++AGL D+ EW LL SLES  NE+ T+ L+ + L    RLF+  +   +S+  +Q MYRR+TRN H +SP     G G  + Q LFPCGALVNHSC PN  FHC +   S +G PVV+ VLR++  ++AG+ELC SY++   A  ++SERR LL GWGF CAC+RC +E   A+EE+R +R R P D +AL  +  + +   L  R+ A  +  +  +  L+   +F++ E+G+ ++P L+ R+ +  M +T L+       RF+    A DEL EL++   I  R + Y  A  + EV    E  A + LE   A+ K
Sbjct:   15 ETRSSSDGDPTRYARRTANLDARVEVRFD---PKRGRGLFALRDIPAGTEVMRVPAAAAVLLDRSRKGSCSGCLLPTDTVGSLEACHGFPLSFCAACKKATTVGGVSGVHNSATCELTKELNTICATSGGIDKDS--LRLAADVFVRRKAGLFDDSEWGLLNSLESHDNEAHTMSLAPAELHKCTRLFKTLVDTNISDEDVQAMYRRITRNAHTVSPNTSKPGFG--SVQGLFPCGALVNHSCLPNTFFHCVTESSSPEGRPVVKQVLRSIRNIRAGDELCYSYLSSGSAVGTVSERRDLLMGWGFRCACARCLSE---AEEEKRLRRQRTPIDERALKMLERLAQISALGQRENAPALREEAYMPDLQLIAEFYSREKGKLLSPMLQYRVAVLMMEVTALIGATNLFFRFMVCGFAADELSELRNAMAITCRQQQYMFATKV-EVCDLGETQATKKLEGIRAVGK 469          
BLAST of mRNA_H-elongata_contig17025.4350.1 vs. uniprot
Match: A0A2T2NC74_CORCC (MYND-type zinc finger protein samB n=1 Tax=Corynespora cassiicola Philippines TaxID=1448308 RepID=A0A2T2NC74_CORCC)

HSP 1 Score: 89.7 bits (221), Expect = 5.060e-15
Identity = 99/373 (26.54%), Postives = 158/373 (42.36%), Query Frame = 2
Query:  410 GRGLFATKDVPEGTEVMRVRAVGTVALRV-RSAGVCCRCFVQQKRSA---RLKTCRGCGLSFCTDCAKAFLNNS---------AHKAACDFSAGVVRLCSRNGGVEHDEAVLRLVADIFVRKEAGLIDEEEWNLLGSLESGGNESGTIGLSLSLLKDSVRLFRETLRIEVSEGGLQTMYRRVTRN-LHAISPVFDDIGSGVTTAQALFPCGALVNHSCQPNALFHCRSRPLSTDGPVVEHVLRTVSPVKAGEELCVSYITDFATASISERRRLLQGWGFWCACSRCKNEEREAQEERREKRARPGDT-KALSCIRNMEKTLQLYARDGAGDIGVKQLDQLREAIQFFA----EEGERITPTLRRRLVMSAMHL 1471
            G G+FA  D   G  ++ V    T +L   R +  C  CFV  + S+   RL    G  +  C  C + +  +           HK  C       +L    G  E  +A+L  V +I  RK  GLI + +W ++  L++   E    G  L  ++      R+          +  MY R+  N L  I+P FD +G  +       P  + +NHSC+PNA        +  DG   E  LRT+ P+KA EE+ +SYI D        +  L   W F C C++C+ E    +++         D  K ++ +   +K L+ +A D A  +G  + ++   A+Q  A    EE ++  P     L++S M L
Sbjct:   32 GDGIFAGSDYGPGEHIIAVPRPLTASLDTERLSDTCANCFVWTEGSSTGSRLYVKEGTSVQKCAGCKRFYYCSKECQKEAWHRGHKHEC-------KLLKPVGDKEIPKAILACV-EILTRKRYGLIPDHQWEMICRLDTHMEEYQQNG-KLHGIQLMAFGTRDLTGNAFEPEFVAAMYARILSNCLTLITPTFDPLGIFID------PLFSHLNHSCEPNAY-------VVMDG--AETSLRTLKPIKANEEIYISYI-DPTNPFARRQSELKSRWFFTCKCTKCQKETTSQEDDWAVPPQDMSDKYKKIADVILKDKKLKEFAEDPANFVGKSKDEKRAGALQAMAFKKYEEEQQSDPATAVDLIISGMEL 379          
BLAST of mRNA_H-elongata_contig17025.4350.1 vs. uniprot
Match: M7SEH1_EUTLA (MYND-type zinc finger protein samB n=1 Tax=Eutypa lata (strain UCR-EL1) TaxID=1287681 RepID=M7SEH1_EUTLA)

HSP 1 Score: 87.8 bits (216), Expect = 1.930e-14
Identity = 80/296 (27.03%), Postives = 125/296 (42.23%), Query Frame = 2
Query:  401 PERGRGLFATKDVPEGTEVMRVRAVGTVALRVRSAGVCCRCFVQQ----KRSARLKT----------CRGCGLSFCTDCAKAFLN---NSAHKAACDFSAGVVRLCSRNGGVEHDEAVLRLVADIFVRKEAGLIDEEEWNLLGSLESGGNESGTIGLSLSLLKDSVRLFRETLRIEVSEGGLQTMYRRV-TRNLHAISPVFDDIGSGVTTAQALFPCGALVNHSCQPNALFHCRSRPLSTDGPVVEHVLRTVSPVKAGEELCVSYITDFATASISERRRLLQGWGFWCACSRCKNE 1234
            PE G GLF+  DVPEG E+ R   +        +  VC  C+         S R +T          C GCG   C  C+K+  +   ++ HK  C+    +   C +           R++  + VR++ GL+  ++W  +  LE+  +ES       + + +  +  +E +   VS   +  +Y  + T N +   P     G       AL    A++NHSC+PNAL       L          +R++ P+KAGEEL   Y TD     +  R RL   + F C C RC+ E
Sbjct:   38 PEAGSGLFSLDDVPEGEEIFRSSPLAECVANELTDSVCDLCYTNTLSRVHSSGRFRTKDDAPLDMIACPGCGK--CYYCSKSCQDKAWDAYHKYECELLPKLSESCPKK----------RVLYRVLVREKNGLLYPDDWKAITCLEAH-HESRLSRPDAASVDELAKSAKERIGSGVSAAEISRLYGSILTNNTNIRGP-----GQSQVLGTALDIPMAVMNHSCEPNALTIFEGNELR---------VRSLRPIKAGEELMQCY-TDVTCDVLMRRERLQNQFFFECTCPRCERE 305          
BLAST of mRNA_H-elongata_contig17025.4350.1 vs. uniprot
Match: W2RPQ1_9EURO (MYND-type zinc finger protein samB n=1 Tax=Cyphellophora europaea CBS 101466 TaxID=1220924 RepID=W2RPQ1_9EURO)

HSP 1 Score: 78.2 bits (191), Expect = 2.250e-11
Identity = 100/407 (24.57%), Postives = 166/407 (40.79%), Query Frame = 2
Query:  407 RGRGLFATKDVPEGTEVMRVRAVGTVAL-RVRSAGVCCRCFVQQKRSAR----------LKTCRGCG-LSFCTDCAKAFLNNSAHKAACDFSAGVVRLCSRNGGVEHDEAVLRLVADIFVRKEAGLIDEEEWNLLGSLESGGNE----SGTIGLSLSLLKDSVRLFRETLRIEVSEGGLQTMYR----RVTRNLHAISPVFDDIGSGVTTAQALFPCGALVNHSCQPNAL--FHCRSRPLSTDGPVVEH---VLRTVSPVKAGEELCVSYITDFATASISERRRLLQ-GWGFWCACSRCKNEEREAQEERREKRARPGDTKALSCIRNMEKTLQLYARDGAGDIG-VKQLD----------QLREAIQFFAEEGERITPTLRRRLVMSAMHLTLLMDGEADVSRFVA 1516
            RG GL AT+D     +++ V+    +AL + +    C  C   Q               LKTC GC  + FC    +     S HK  C   A +      +        ++RL+  +    + GLI +EEW+ L  LES  N+     G     +SL+  ++  +  T      +  L+T+ R     +  +    +P FD +G        L P  A++NHSC+PNA+  F   S       P V H    +  + P+  GEE+C++YI   AT S+  R+  L+  + F C C  C+   R  +            T  L  + +  +T +LY  +    +G +  LD          QLR  +       +     +R+ LV+++    +L + +   SR V+
Sbjct:   25 RGNGLLATRDFSPHAQILFVKRPLILALDKPQLETTCYACLRSQDAQVTSNGTEPGELTLKTCMGCHTVRFCNKTCQKHAWTSYHKLECKLFAKLHPRVLPSAA----RGIIRLLLQL----KHGLITDEEWSQLRDLESHQNDLCEAGGDRWEDISLMIKAIMAYSGT------KESLETVTRICCTLMVNSFTLTTPTFDPVGI------VLHPLPAMMNHSCEPNAIVRFDITSSTSPVPIPKVHHGSISVHALRPIAKGEEICITYID--ATMSLERRQADLKLRYFFDCGCLMCQRGPRIEESNAEALPTLSTATNLLLSLSSKPRTHELYIPELRRALGNLAALDDLPLHSYPYAQLRHQLVLALIATQDFEEAMRQNLVLTSKIDPVLYEQQHHPSRLVS 409          
BLAST of mRNA_H-elongata_contig17025.4350.1 vs. uniprot
Match: A0A6A6RQ84_9PLEO (MYND-type zinc finger protein samB n=1 Tax=Massarina eburnea CBS 473.64 TaxID=1395130 RepID=A0A6A6RQ84_9PLEO)

HSP 1 Score: 76.6 bits (187), Expect = 6.630e-11
Identity = 81/297 (27.27%), Postives = 128/297 (43.10%), Query Frame = 2
Query:  386 VDAAKPERGRGLFATKDVPEGTEVM-RVRAVGTVALRVRSAGVCCRCFVQQ----------KRSARLKTCRGCG-LSFCTDCAKAFLNNSAHKAACDFSAGVVRLCSRNGGVEHDEAVLRLVADIFVRKEAGLIDEEEWNLLGSLESGGNE---SGTIGLSLSLLKDSVRLFRETLRIEVSEGGLQTMYRRVTRN-LHAISPVFDDIGSGVTTAQALFPCGALVNHSCQPNALFHCRSRPLSTDGPVVEHVLRTVSPVKAGEELCVSYITDFATASISERRRLLQGWGFWCACSRCK 1228
            V+AA    G G+FA  +   G  +  R R V       R    C  CFV            K   +++ C GC    +C+   +    +  HK  C     +       GG E  +AVL  + ++ VRK+ GLI +E+W +L SL++   +   +G  G ++ L+      F  T +    +  +  MY R+  N L  I+P  D +G  + +          +NHSC+PNA        L  DGPV+  V   +  +   EE+ +SYI D    S   +  L + W F C C++C+
Sbjct:   15 VNAAGETIGDGVFARCNYEPGDFIASRPRPVLASLETERLNDTCANCFVWTQGSGGSRLYVKEGTKVQACGGCKRFRYCSKACQKEAWHRGHKHECKNLRSI-------GGREVPKAVLGCM-ELLVRKKHGLISDEDWEMLCSLDAHIEDFKRNGKYG-NIELMAMGTSQFSLT-QDTFDKDFVAEMYARILANSLTLITPTLDPLGIMIDSTFCH------LNHSCEPNAC-------LVMDGPVIRLV--ALDSINKDEEIYISYI-DPTNPSTRRQNELKERWFFDCKCTKCR 285          
BLAST of mRNA_H-elongata_contig17025.4350.1 vs. uniprot
Match: A0A1Y2D3F3_9FUNG (SET domain-containing protein (Fragment) n=1 Tax=Rhizoclosmatium globosum TaxID=329046 RepID=A0A1Y2D3F3_9FUNG)

HSP 1 Score: 74.7 bits (182), Expect = 2.570e-10
Identity = 86/309 (27.83%), Postives = 131/309 (42.39%), Query Frame = 2
Query:  392 AAKPERGRGLFATKDVPEGTEVMRVRAVGTVALRVRSAGVCCRCFVQ---------------------QKRSARLKTCRGCGLSF-CTDCAKAFLNNSAHKAACDFSAGVVR-LCSRNGGVEHDEAVLRLVADIFVRKE------AGLIDEEEWNLLGSLESGGNESGTIGLSL--SLLKDSVRLFRETLRIEVSEGGLQTMYRRVTRNLHAISPVFDDIGSGVTTAQALFPCGALVNHSCQPNALFHCRSRPLSTDGPVVEHVLRTVSPVKAGEELCVSYITDFATASISERRRLLQGWGFWCACSRC 1225
            AA   +GR + A  D+  GT V+ V     +AL   S    C C ++                       +++ +K  R    +F C+D  K   N+ A + A +    V+R L         D  ++RLV  + V++       A + +    +L+  L S         L+      +D  +     L I VS+  + ++  R+  N H I     +    V     +FP  A++NHSC PN  F       ST G ++   +RT+ PVK GEELCVSY+ D  T     R +LL+   FWCACSRC
Sbjct:    2 AASKAKGRHVKAAADLVAGTNVV-VETASALALLKHSTDELCLCCLRPLPSESTTRAGERINLLGGSSSSKTSAIKCARCIKQAFYCSDTCK---NDDAKRHALECE--VLRDLPGITAAANVDYTLMRLVLAVLVQRSMELSGAAAVRENTSADLVFDLLSHRKTCDPKWLACVEECAEDFAQHLPPELAIPVSD--IVSLACRINSNSHGIIDPTGNTNGEVGVG--MFPLVAMLNHSCAPNCSFVS-----STHGKMI---VRTLRPVKEGEELCVSYV-DLCTPRDERRGKLLETKHFWCACSRC 291          
BLAST of mRNA_H-elongata_contig17025.4350.1 vs. uniprot
Match: A0A7S1HKR9_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1HKR9_HEMAN)

HSP 1 Score: 73.6 bits (179), Expect = 2.620e-10
Identity = 81/300 (27.00%), Postives = 118/300 (39.33%), Query Frame = 2
Query:  407 RGRGLFATKDVPEGTEVMRVRAVGTVALRVRSAGVCCRCFVQQKRSARLKTCRGCGLS-FCTDCAKAFLNNSAHKAACDFSAGVVRLCSRNGGVEHDEAVLRLVADI-FVRKEAGLIDEEEWNLLGSLES--------------------GGNESGTIGLSLSLLKDSVRLFRETLRIEVSE----GGLQTMYRRVTRNLHAI-SPVFDDIGSGVTTAQALFPCGALVNHSCQPNALFHCRSRPLSTDGPVVEHVLRTVSPVKAGEELCVSYITDFATASISERRRLLQGWGFWCACSRC 1225
            +G  L A +    G  V+       V    R    C +CF +    A L  C  C  + +C    +     S HK  C  S G+   CS+     H     RL+  +  +    G  ++E    L +                       G  E  T+ LSL L   S  L ++   ++ S       L+ +  R   N  +I   +   IGSGV      +P GA++NHSC PN + +   R           V+R +S V+ G+ELC SYI D A+A+     RL   +GF CAC RC
Sbjct:   27 KGTHLVANRSFRPGDIVLDSPPFAFVLGEGREGERCEQCFERGTDEAPLLVCTACKCARYCGASCQKEAWKSHHKLECCISKGIAETCSQMP--PHVVPEFRLLLRVALLSMSTGTTEDEGSGYLQTFADVLNMPSNTSHMHSADPQRCQGNTEISTVVLSLLL---SPLLAKKKKSVDFSRMPGPDQLEGLLERFAYNDFSIWDELLISIGSGV------YPLGAILNHSCAPNCVLYYEPR-------THRQVIRAISAVREGDELCHSYI-DAASATPQRLERLSICYGFQCACQRC 307          
BLAST of mRNA_H-elongata_contig17025.4350.1 vs. uniprot
Match: A0A139A8D8_GONPJ (SET domain-containing protein n=1 Tax=Gonapodya prolifera (strain JEL478) TaxID=1344416 RepID=A0A139A8D8_GONPJ)

HSP 1 Score: 74.7 bits (182), Expect = 3.280e-10
Identity = 97/325 (29.85%), Postives = 131/325 (40.31%), Query Frame = 2
Query:  407 RGRGLFATKDVPEGTEVMRVRAVGTVALRVRSAGVCCRCFVQQKRSARLKTCRGCGLSFCTDCAKAFLNNSAHKAACDFSAGVVRLCSRNGGVEHDEAV----LRLVADIFVRKEAGLIDEEE----WN---------LLGSLESG---GNESGTIGLSLSLLKDSVRLFRETLRIEVSEGGLQTMYRRVTRNLHAI---------SPVFD----------DIGSGVTTAQALFPCGALVNHSCQPNALFHCRSRPLSTDGPVVEHVLRTVSPVKAGEELCVSYITDFATASISERRRLLQGWGFWCACSRCK-NEEREAQEERR 1261
            RGR   A  ++  GT V+  R V  +      + +C  CF +    +           F   C   + ++    A  D      RL      +  DE V    LRLVA +  R+  G   + E    WN         L+ SL S     N      +S +  K S  L  E  R  V+   L T+   +  N H +         S  +D           +G G+TTA  LFP GAL+NHSC+PN ++         DG +V    RT+  VK GEEL VSYI       +  R  LL    FWC CSRC  +EER + E RR
Sbjct:   37 RGRHALAKTNLDPGTVVIVERGVAVIPTSAGLSLICSHCFKELPADSVRGDDSLTNGKF--HCLHFYCSSQCRDADVDGHQVECRLMPTMRDISLDEDVDLDLLRLVARLVARRHIGERAQSETSRAWNPLFENTPFPLVTSLLSHRKYANIKWIKTVSAASAKLSPPLAAEVGR-PVNPDLLLTLSCVINSNAHGLGDTRTVQGHSSFYDRMSSQSAGPMGVGGGLTTAFGLFPLGALLNHSCEPNCVYGA-----GQDGTIV---FRTIKEVKEGEELLVSYIPLDDPLPV-RRGVLLTTKHFWCECSRCGGSEERLSAEFRR 349          
BLAST of mRNA_H-elongata_contig17025.4350.1 vs. uniprot
Match: A0A6A6B7E9_9PEZI (SET domain-containing protein (Fragment) n=1 Tax=Aplosporella prunicola CBS 121167 TaxID=1176127 RepID=A0A6A6B7E9_9PEZI)

HSP 1 Score: 72.8 bits (177), Expect = 5.570e-10
Identity = 79/277 (28.52%), Postives = 112/277 (40.43%), Query Frame = 2
Query:  410 GRGLFATKDVPEGTEVMRV-RAVGTVALRVRSAGVCCRCFVQQKRSAR--LKTCRGCGLSFCTDCAKAFLNNSAHKAACDFSAGVVRLCSRNGGVEHDEAVLRLVADIFVRKEAGLIDEEEWNLLGSLESGGNE--SGTIGLSLSLLKDSVRLFRETLRIEVSEGGLQTMYRRVTRNLHAISPVFDDIGSGVTTAQALFPCGALVNHSCQPNALFHCRSRPLSTDGPVVEHVLRTVSPVKAGEELCVSYITDFATASISERRRLLQGWGFW-CACSR 1222
            G GLFA + +P G E+  + R +      VR A  C  CF  Q    R  LK C G       +C                      +  RN G+E     +RL   I   ++ GLI +E W  L SLE+   +   G    +  +L D V  F         +  + T  R +   L+  +P F+ IG        L P  + +NHSC PNAL       L   G V+   LR++ P+   EE+ +SYI   AT     RR  L    ++ C CS+
Sbjct:    1 GNGLFAKEAIPAGEEIFSLDRPLAAALDSVRIANCCSNCFTFQNLDVRANLKACAG------YECP---------------------VWQRNPGMETIPQSMRLGVQILSMRKNGLISDETWAELLSLETHIEKIRGGPKWKNFQVLGDGVLKFSNVQPTFGMDDAMDTFLRIMANYLNIETPSFEKIGI------CLDPLVSTLNHSCVPNAL-------LIWQGSVMH--LRSLKPIAKDEEIFISYID--ATNPTPRRRLELDDLRYFTCNCSK 233          
BLAST of mRNA_H-elongata_contig17025.4350.1 vs. uniprot
Match: UPI00143D904E (SET domain-containing protein SmydA-8-like isoform X1 n=2 Tax=Belonocnema kinseyi TaxID=2817044 RepID=UPI00143D904E)

HSP 1 Score: 73.6 bits (179), Expect = 6.020e-10
Identity = 79/281 (28.11%), Postives = 123/281 (43.77%), Query Frame = 2
Query:  410 GRGLFATKDVPEGTEVMRVRAVGTVALRV--RSAGVCCRCFVQQKRSARLKTC-RGCGLSFCTDCAKAFLNNSAH-KAACDFSAGVVRLCSRNGGVEHDEAVLRLVADIFVRKEAGLIDEEEWNLLGSLESGGNESGTIGLSLSLLKDSVRLF----RETLRIEVSEGGLQTMYRR-VTRNLHAISPVFDDIGSGVTTAQALFPCGALVNHSCQPNALFHCRSRPLSTDGPVVEHVLRTVSPVKAGEELCVSYITDFATASISERRRLLQGWGFWCACSRC 1225
            GRGLFAT+D+ +G E++ + A   +  R   +   +C  C    K    L  C RGCGL  C++  +   N+  H +  CD+   +   C   G ++  +AV+ + +  F         E+E  LL + E   +    +G  + LLK +V++      E L + VS     T +   +T N  + S             +AL+P GAL NHSC PN   H  S   +        ++    P+K GEE+ ++Y TD    +   R  L     F C C RC
Sbjct:   40 GRGLFATRDIQQG-ELIFIDAPLVIGPRCYKKYLPMCVNCC---KVDCSLFPCERGCGLPVCSNECE---NSPKHIRLECDYLRSLKPTCDSTGSIDLLQAVVPIRSLTF--------SEDEKKLLHAFEC--HPEVQMGREVELLKKNVKINPSEEEEALMLRVSRVMDTTCFETAITTNKSSAS------------LRALYPLGALQNHSCIPNTRHHFDSNQRA--------IVSAALPIKKGEEITMTY-TDLLWDTTLRRHFLKVTKYFSCKCERC 282          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig17025.4350.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FPE5_ECTSI3.460e-8939.91SET and MYND domain containing 1b n=1 Tax=Ectocarp... [more]
A0A2T2NC74_CORCC5.060e-1526.54MYND-type zinc finger protein samB n=1 Tax=Corynes... [more]
M7SEH1_EUTLA1.930e-1427.03MYND-type zinc finger protein samB n=1 Tax=Eutypa ... [more]
W2RPQ1_9EURO2.250e-1124.57MYND-type zinc finger protein samB n=1 Tax=Cyphell... [more]
A0A6A6RQ84_9PLEO6.630e-1127.27MYND-type zinc finger protein samB n=1 Tax=Massari... [more]
A0A1Y2D3F3_9FUNG2.570e-1027.83SET domain-containing protein (Fragment) n=1 Tax=R... [more]
A0A7S1HKR9_HEMAN2.620e-1027.00Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
A0A139A8D8_GONPJ3.280e-1029.85SET domain-containing protein n=1 Tax=Gonapodya pr... [more]
A0A6A6B7E9_9PEZI5.570e-1028.52SET domain-containing protein (Fragment) n=1 Tax=A... [more]
UPI00143D904E6.020e-1028.11SET domain-containing protein SmydA-8-like isoform... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig17025contigH-elongata_contig17025:3086..6675 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score194.1
Seed ortholog evalue1.5e-46
Seed eggNOG ortholog2880.D7FPE3
KEGG koko:K11426
EggNOG free text desc.SET domain
EggNOG OGsCOG2940@1,KOG2084@2759
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03036
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionSET domain protein
Ec32 orthologEc-14_004640.1
Exons4
Model size2110
Cds size1491
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig17025.4350.1prot_H-elongata_contig17025.4350.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig17025 3333..6303 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929992.4895551-UTR-H-elongata_contig17025:3085..33321622929992.4895551-UTR-H-elongata_contig17025:3085..3332Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig17025 3086..3332 +
1691679238.026812-UTR-H-elongata_contig17025:3085..33321691679238.026812-UTR-H-elongata_contig17025:3085..3332Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig17025 3086..3332 +
1622929992.6097083-UTR-H-elongata_contig17025:6303..66751622929992.6097083-UTR-H-elongata_contig17025:6303..6675Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig17025 6304..6675 +
1691679238.0819857-UTR-H-elongata_contig17025:6303..66751691679238.0819857-UTR-H-elongata_contig17025:6303..6675Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig17025 6304..6675 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929992.5235698-CDS-H-elongata_contig17025:3332..39971622929992.5235698-CDS-H-elongata_contig17025:3332..3997Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17025 3333..3997 +
1691679238.038811-CDS-H-elongata_contig17025:3332..39971691679238.038811-CDS-H-elongata_contig17025:3332..3997Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17025 3333..3997 +
1622929992.5414433-CDS-H-elongata_contig17025:4302..45611622929992.5414433-CDS-H-elongata_contig17025:4302..4561Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17025 4303..4561 +
1691679238.0488548-CDS-H-elongata_contig17025:4302..45611691679238.0488548-CDS-H-elongata_contig17025:4302..4561Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17025 4303..4561 +
1622929992.5572662-CDS-H-elongata_contig17025:4846..50161622929992.5572662-CDS-H-elongata_contig17025:4846..5016Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17025 4847..5016 +
1691679238.063963-CDS-H-elongata_contig17025:4846..50161691679238.063963-CDS-H-elongata_contig17025:4846..5016Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17025 4847..5016 +
1622929992.5959172-CDS-H-elongata_contig17025:5906..63031622929992.5959172-CDS-H-elongata_contig17025:5906..6303Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17025 5907..6303 +
1691679238.073397-CDS-H-elongata_contig17025:5906..63031691679238.073397-CDS-H-elongata_contig17025:5906..6303Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17025 5907..6303 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig17025.4350.1

>prot_H-elongata_contig17025.4350.1 ID=prot_H-elongata_contig17025.4350.1|Name=mRNA_H-elongata_contig17025.4350.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=497bp
MPTFSSGGPAAPDPGGCDLEILTPTSFNPNPFARRAAKLDKRVVFRVDAA
KPERGRGLFATKDVPEGTEVMRVRAVGTVALRVRSAGVCCRCFVQQKRSA
RLKTCRGCGLSFCTDCAKAFLNNSAHKAACDFSAGVVRLCSRNGGVEHDE
AVLRLVADIFVRKEAGLIDEEEWNLLGSLESGGNESGTIGLSLSLLKDSV
RLFRETLRIEVSEGGLQTMYRRVTRNLHAISPVFDDIGSGVTTAQALFPC
GALVNHSCQPNALFHCRSRPLSTDGPVVEHVLRTVSPVKAGEELCVSYIT
DFATASISERRRLLQGWGFWCACSRCKNEEREAQEERREKRARPGDTKAL
SCIRNMEKTLQLYARDGAGDIGVKQLDQLREAIQFFAEEGERITPTLRRR
LVMSAMHLTLLMDGEADVSRFVALQAAGDELMELKDPGMIDLRYKLYKEA
LGLREVEPFFEESARRALEDAVAMSKLMYGKQHPRSRELTREFDKL*
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mRNA from alignment at H-elongata_contig17025:3086..6675+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig17025.4350.1 ID=mRNA_H-elongata_contig17025.4350.1|Name=mRNA_H-elongata_contig17025.4350.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3590bp|location=Sequence derived from alignment at H-elongata_contig17025:3086..6675+ (Himanthalia elongata Himel1 dioecious)
GGTGATCGATGGACTCGAGGAAGGATCGTGGAGAGTGATCCGCTGGGATC CAGATGGACTTGTGCTGCTCGAACCATGCCCCTCTGCTGGCGAAGGCGAC AACTCAACGGACTGTGCCAGGCGGCGGGGCACACGGTGGGCCTTCCACCA GGATCTACGAGCAGCGCAAGCTGCCTCCGACAGGAGGGATGCACCTCACG CGAGCATCGCCGTCACAACCTTATCCTCCCCCCCAACCTCGACCGTAATG CCTACCTTCTCCAGCGGGGGTCCCGCCGCCCCTGACCCTGGCGGTTGCGA CCTGGAAATACTTACACCGACCTCCTTCAATCCGAACCCGTTCGCCCGAC GAGCCGCCAAGCTCGACAAGCGAGTCGTGTTCCGAGTAGATGCGGCCAAG CCGGAGCGAGGCCGAGGGCTGTTCGCCACGAAGGACGTCCCCGAAGGGAC GGAAGTGATGAGAGTGCGTGCTGTAGGGACGGTTGCGTTGCGTGTACGAT CGGCAGGTGTCTGCTGTCGATGCTTCGTGCAGCAAAAACGGTCCGCCCGG TTGAAGACTTGCCGTGGCTGCGGCTTGAGTTTCTGCACCGACTGCGCGAA GGCCTTCCTTAATAATAGCGCCCACAAGGCCGCCTGCGACTTCTCCGCCG GAGTGGTCCGGCTCTGCTCGAGGAATGGTGGAGTGGAACACGACGAAGCT GTCCTTCGGCTGGTCGCTGATATTTTTGTGCGGAAGGAGGCCGGCCTGAT AGACGAGGAGGAGTGGAACTTGCTGGGAAGCCTTGAAAGCGGTGGCAACG AATCGGGCACGATCGGCCTGAGCCTCAGCCTACTCAAGGACTCCGTGCGA CTATTTAGGGAAACGTTGCGCATCGAGGTCTCGGAGGGAGGTCTTCAGAC CATGTACCGCAGGCACGACTAAACAGATTTCTTGAAAATATCAGTACACT ATCGATCTGTAGTAGGAACGGCGGGTGCCGTGCGCCCCTCAACTGATCCC GCGACGTGCAGTCGACTGCCTCTTTGTTTGCCTACCAGATGCGAGGGACG TAACCCCACCTAGCTCACTCTGCTGTGTCTATGGACTGCACTCGCCCGAC CCGTACCCGCTGCGCGCAAAATACTGCCCCGCTACTGCCTTGCGCTTATC GATTCCTCGCCGTTAAAACGCTTCGTTCGCGCCCCTCGCGCATGTGTGTT CCTCTGATTACCACTAGGGTGACTCGTAATCTGCACGCCATCAGCCCGGT CTTCGACGACATTGGCTCGGGCGTGACCACGGCTCAGGCACTCTTTCCCT GTGGGGCACTGGTCAACCACTCCTGCCAGCCGAATGCACTATTCCACTGC CGGAGCCGCCCTTTATCAACGGATGGACCAGTCGTCGAGCACGTGCTGCG GACGGTCTCCCCCGTCAAGGCAGGGGAAGAGCTATGCGTTTCGTACATCA CCGATTTCGCAACGGCGTCCATCTCGGTGAGCCCGTGACGACTTGGTTGA TGGTCTAGCTAGTGATGCCGAAACACGCAACAAACTCGGTAGAGAAAGTG ACGGATGTTGCCCCGTGCGGGTGGAACGCGACATTTCTTCTCCAGCGATG CGCCGCGCCAAACAGAAGCTGGTTGCCAACGAGTTAACGCAGTGTAGCGC GGCCATAACGCGAGCGCCGCCTCGGAGGAAATGTGTATTGACCCTCTTAT TGCACCGCCGGCACGCCTACGCTTTTGCTCCGTCTCCTTTGCGCCACTCG CCGCGCCACAGGAGCGTCGGAGGTTGCTGCAGGGCTGGGGCTTCTGGTGT GCCTGCTCGAGGTGCAAGAATGAGGAGCGAGAGGCACAGGAGGAGCGCCG CGAGAAACGCGCGCGACCGGGAGACACCAAGGCTTTATCATGCATAAGAA ACATGGAGAAAACGCTCCAGCTCTACGCCCGGTGAGTCTGGTACTTGTTG AGTCGTGCAATGCGACGAAAGGACGAGGAATGGCGTGATGGGTCCGAATT TTTATTGTGTACCAACAATGAGATTTGATCCTTTGCGGATTGATTTCGTC TGGATTTTGAATTGCAGCATGTCTGGGCCCACATGTCGACAAACAGCAGA GGCCAGCGGAGCGAATTTACCGGAGGTTGTAGGCAGCGAAGACATACTCC TACTACAACAGCAGGCCCTTCGCTAAGGGAGCGCTGTCGCCTTCTTCCCT CCCCCTCCCCCACTATTGGCTATCGATAATTCCAGCAAGCACATACGACT TGTCGAGGTGGTGGAAATCCTTTTTTCCGTTTTTATTTGTCGGAGTTACT TCTGTGCTTAGATCAACGGTACCCGTGTGCCCATCGTACCCGGTCCTGGT CCCGTGCTACATGTGGATACCTTAGGCTCCTGGGTGGAAAACCCTCCAGA GATCCGACACGATGGGAGGTGAAAACATGCCAGGGAGCGGATTTTGAAAG GCAGACCATGCCCTAATCGCCTCGTTTTGTGTGACTACTGATCTTCCTGC CAAGAGGGATAAATGGCGTATTTCCATCTTCGAAGTCTAGTATTTTCCCG TTACCAGTCTTACACCTGCACCCACAAAACAATACCCACAAATAAGCTTA CAAGTGTCAATCGTGAGGCTGCCCCCTCACCCCTCCCCCACCATCACCAA CGGCCGAACCGTCAGGAAAGGCTCCGATTCCACAGATGCGATCGGAATCG TGTGCGCATAAGAGTCTCGCGGTGTTAGATCAAACGCACGCGCTGCTGTT GTGCTGACAGCTATTAATAGTACGGATCTTCCCCGTGATCGCTGAACCAC TTTCGGCCGTTGACGGACCAGGGACGGCGCCGGCGACATCGGTGTAAAAC AGTTAGACCAGCTCAGAGAAGCCATCCAGTTTTTCGCGGAAGAGGGGGAG CGAATTACGCCCACGTTGCGCCGCCGCCTAGTGATGAGCGCCATGCACCT CACGTTGCTCATGGATGGAGAGGCCGACGTCTCGAGGTTCGTGGCCCTCC AAGCGGCAGGCGATGAGCTGATGGAGCTCAAGGACCCCGGCATGATAGAC TTGAGATACAAGCTTTACAAGGAAGCTCTTGGGTTACGTGAAGTAGAACC CTTTTTTGAAGAGTCGGCCAGGAGGGCCCTTGAGGATGCCGTCGCGATGT CCAAGCTCATGTATGGAAAGCAGCACCCACGTAGTCGCGAGCTGACGAGG GAGTTCGATAAATTGTAAAACGCAGGCCGGCTGGTCTTCGACTATGTCTG GATGTAAGTTGCAAATCGTCCCAGAGTCGACGAAGGCGGTAGAATAGTTC ATTGGTCTACCTTTTTCTATCCTACTACTACAAGACTGCTTATTTTGCCT GTATCTTCTTCTCTGATATGTCTGCATATATTCGCTGTAATACGTTTGTA CTCGATTGAGCTGGCCTAATATTAATAGTAGAATAATATCGTTAGGGTTT GTGGGGTTTCAGCGTTTGCCGAAAGATAATGTATATACGGATTAGCAAAA AACCCCACCGAATCCGGGGATGTTGTATTTCTCCTGCCCGCAACAGTGCC ATTGGTATAACTTCCCCTAATGTAAAACTTATTTTTGGGT
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Coding sequence (CDS) from alignment at H-elongata_contig17025:3086..6675+

>mRNA_H-elongata_contig17025.4350.1 ID=mRNA_H-elongata_contig17025.4350.1|Name=mRNA_H-elongata_contig17025.4350.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2982bp|location=Sequence derived from alignment at H-elongata_contig17025:3086..6675+ (Himanthalia elongata Himel1 dioecious)
ATGCCTACCTTCTCCAGCGGGGGTCCCGCCGCCCCTGACCCTGGCGGTTG
CGACCTGGAAATACTTACACCGACCTCCTTCAATCCGAACCCGTTCGCCC
GACGAGCCGCCAAGCTCGACAAGCGAGTCGTGTTCCGAGTAGATGCGGCC
AAGCCGGAGCGAGGCCGAGGGCTGTTCGCCACGAAGGACGTCCCCGAAGG
GACGGAAGTGATGAGAGTGCGTGCTGTAGGGACGGTTGCGTTGCGTGTAC
GATCGGCAGGTGTCTGCTGTCGATGCTTCGTGCAGCAAAAACGGTCCGCC
CGGTTGAAGACTTGCCGTGGCTGCGGCTTGAGTTTCTGCACCGACTGCGC
GAAGGCCTTCCTTAATAATAGCGCCCACAAGGCCGCCTGCGACTTCTCCG
CCGGAGTGGTCCGGCTCTGCTCGAGGAATGGTGGAGTGGAACACGACGAA
GCTGTCCTTCGGCTGGTCGCTGATATTTTTGTGCGGAAGGAGGCCGGCCT
GATAGACGAGGAGGAGTGGAACTTGCTGGGAAGCCTTGAAAGCGGTGGCA
ACGAATCGGGCACGATCGGCCTGAGCCTCAGCCTACTCAAGGACTCCGTG
CGACTATTTAGGGAAACGTTGCGCATCGAGGTCTCGGAGGGAGGTCTTCA
GACCATGTACCGCAGATGCCTACCTTCTCCAGCGGGGGTCCCGCCGCCCC
TGACCCTGGCGGTTGCGACCTGGAAATACTTACACCGACCTCCTTCAATC
CGAACCCGTTCGCCCGACGAGCCGCCAAGCTCGACAAGCGAGTCGTGTTC
CGAGTAGATGCGGCCAAGCCGGAGCGAGGCCGAGGGCTGTTCGCCACGAA
GGACGTCCCCGAAGGGACGGAAGTGATGAGAGTGCGTGCTGTAGGGACGG
TTGCGTTGCGTGTACGATCGGCAGGTGTCTGCTGTCGATGCTTCGTGCAG
CAAAAACGGTCCGCCCGGTTGAAGACTTGCCGTGGCTGCGGCTTGAGTTT
CTGCACCGACTGCGCGAAGGCCTTCCTTAATAATAGCGCCCACAAGGCCG
CCTGCGACTTCTCCGCCGGAGTGGTCCGGCTCTGCTCGAGGAATGGTGGA
GTGGAACACGACGAAGCTGTCCTTCGGCTGGTCGCTGATATTTTTGTGCG
GAAGGAGGCCGGCCTGATAGACGAGGAGGAGTGGAACTTGCTGGGAAGCC
TTGAAAGCGGTGGCAACGAATCGGGCACGATCGGCCTGAGCCTCAGCCTA
CTCAAGGACTCCGTGCGACTATTTAGGGAAACGTTGCGCATCGAGGTCTC
GGAGGGAGGTCTTCAGACCATGTACCGCAGGGTGACTCGTAATCTGCACG
CCATCAGCCCGGTCTTCGACGACATTGGCTCGGGCGTGACCACGGCTCAG
GCACTCTTTCCCTGTGGGGCACTGGTCAACCACTCCTGCCAGCCGAATGC
ACTATTCCACTGCCGGAGCCGCCCTTTATCAACGGATGGACCAGTCGTCG
AGCACGTGCTGCGGACGGTCTCCCCCGTCAAGGCAGGGGAAGAGCTATGC
GTTTCGTACATCACCGATTTCGCAACGGCGTCCATCTCGGGTGACTCGTA
ATCTGCACGCCATCAGCCCGGTCTTCGACGACATTGGCTCGGGCGTGACC
ACGGCTCAGGCACTCTTTCCCTGTGGGGCACTGGTCAACCACTCCTGCCA
GCCGAATGCACTATTCCACTGCCGGAGCCGCCCTTTATCAACGGATGGAC
CAGTCGTCGAGCACGTGCTGCGGACGGTCTCCCCCGTCAAGGCAGGGGAA
GAGCTATGCGTTTCGTACATCACCGATTTCGCAACGGCGTCCATCTCGGA
GCGTCGGAGGTTGCTGCAGGGCTGGGGCTTCTGGTGTGCCTGCTCGAGGT
GCAAGAATGAGGAGCGAGAGGCACAGGAGGAGCGCCGCGAGAAACGCGCG
CGACCGGGAGACACCAAGGCTTTATCATGCATAAGAAACATGGAGAAAAC
GCTCCAGCTCTACGCCCGGAGCGTCGGAGGTTGCTGCAGGGCTGGGGCTT
CTGGTGTGCCTGCTCGAGGTGCAAGAATGAGGAGCGAGAGGCACAGGAGG
AGCGCCGCGAGAAACGCGCGCGACCGGGAGACACCAAGGCTTTATCATGC
ATAAGAAACATGGAGAAAACGCTCCAGCTCTACGCCCGGGACGGCGCCGG
CGACATCGGTGTAAAACAGTTAGACCAGCTCAGAGAAGCCATCCAGTTTT
TCGCGGAAGAGGGGGAGCGAATTACGCCCACGTTGCGCCGCCGCCTAGTG
ATGAGCGCCATGCACCTCACGTTGCTCATGGATGGAGAGGCCGACGTCTC
GAGGTTCGTGGCCCTCCAAGCGGCAGGCGATGAGCTGATGGAGCTCAAGG
ACCCCGGCATGATAGACTTGAGATACAAGCTTTACAAGGAAGCTCTTGGG
TTACGTGAAGTAGAACCCTTTTTTGAAGAGTCGGCCAGGAGGGCCCTTGA
GGATGCCGTCGCGATGTCCAAGCTCATGTATGGAAAGCAGCACCCACGTA
GTCGCGAGCTGACGAGGGAGTTCGATAAATTGTAAGGACGGCGCCGGCGA
CATCGGTGTAAAACAGTTAGACCAGCTCAGAGAAGCCATCCAGTTTTTCG
CGGAAGAGGGGGAGCGAATTACGCCCACGTTGCGCCGCCGCCTAGTGATG
AGCGCCATGCACCTCACGTTGCTCATGGATGGAGAGGCCGACGTCTCGAG
GTTCGTGGCCCTCCAAGCGGCAGGCGATGAGCTGATGGAGCTCAAGGACC
CCGGCATGATAGACTTGAGATACAAGCTTTACAAGGAAGCTCTTGGGTTA
CGTGAAGTAGAACCCTTTTTTGAAGAGTCGGCCAGGAGGGCCCTTGAGGA
TGCCGTCGCGATGTCCAAGCTCATGTATGGAAAGCAGCACCCACGTAGTC
GCGAGCTGACGAGGGAGTTCGATAAATTGTAA
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