mRNA_H-elongata_contig17017.4345.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig17017.4345.1
Unique NamemRNA_H-elongata_contig17017.4345.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig17017.4345.1 vs. uniprot
Match: D8LLC4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLC4_ECTSI)

HSP 1 Score: 676 bits (1745), Expect = 2.790e-237
Identity = 357/415 (86.02%), Postives = 380/415 (91.57%), Query Frame = 1
Query:    1 RPSVIYKYALDQMPREQVPELYRDFIGFEKRHGSVKGIEEVIINNRRMQYEEQASASPLDYDNWFDYLRLEESTGDIDRTREVYERAIANVPPVAEKRYWRRYIYLWINYALFEELQAEDVQRTRRVYRACLDVVPHTSFTFAKVWLLLAKFHVRHKDLGAARKILGQALGMCPKEKLFIGYVQLERDLGEIDRCRKIYRHGSRQGFLEAFPSDCGAWTKFATLEASVGENERARAIFELAIRQPVLDMPETLWKEXXXXXXXXXXXXXXXXXXERLLERTQHVKVWITYAQHEARTAGDLDAARGVFGRGYEHLRKQGLKEERVKLLEAWRAAEKAEGKGKTTGLQEVESKMPRKFKKKRMMTGTNGEGMGWEEYYDYQFPDDESKPANLKILEMAQKWKQS-GAGEAGLAGMK 1242
            R  VIYKYALDQMPREQVPELYRDFIGFEKRHGSV+GIEEVI+NNRR+QYEE+ASASPLDYDNWFDYLRLEESTGD+DRTREVYERAIANVPPV EKR+WRRYIYLWINYALFEELQAED QRTR VYRACLDVVPH SFTFAK+WL+LAKF VRHKDL AARK+LGQA+GMCPKEKLF GYVQLERDLGEIDRCRK+Y        LEAFPSDCG W +FA LE SVGE ER+RA+FELAIRQPVLDMPETLWK XXXXXXXXXXXXXXXXXX RLLERTQHVKVWI+YAQ+EA+   +LD AR VF RGY+HLR+QGLKEERVKLLEAWRAAEKAEGKGKT GL+EVESKMPRKFKK+RMMTGTNGEGMGWEEYYDYQFPDDE+KPANLKILEMAQKWKQ  GAGE GLAG K
Sbjct:  260 RARVIYKYALDQMPREQVPELYRDFIGFEKRHGSVQGIEEVIMNNRRLQYEERASASPLDYDNWFDYLRLEESTGDLDRTREVYERAIANVPPVLEKRFWRRYIYLWINYALFEELQAEDAQRTREVYRACLDVVPHKSFTFAKIWLMLAKFEVRHKDLQAARKVLGQAIGMCPKEKLFKGYVQLERDLGEIDRCRKVYSK-----CLEAFPSDCGVWAQFAALEGSVGETERSRAVFELAIRQPVLDMPETLWKXXXXXXXXXXXXXXXXXXXXRLLERTQHVKVWISYAQYEAKA--ELDTARVVFRRGYDHLRRQGLKEERVKLLEAWRAAEKAEGKGKTRGLKEVESKMPRKFKKRRMMTGTNGEGMGWEEYYDYQFPDDETKPANLKILEMAQKWKQKKGAGEDGLAGFK 667          
BLAST of mRNA_H-elongata_contig17017.4345.1 vs. uniprot
Match: A0A835ZA95_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZA95_9STRA)

HSP 1 Score: 470 bits (1210), Expect = 1.790e-157
Identity = 260/417 (62.35%), Postives = 305/417 (73.14%), Query Frame = 1
Query:    1 RPSVIYKYALDQMPREQVPELYRDFIGFEKRHGSVKGIEEVIINNRRMQYEEQASASPLDYDNWFDYLRLEESTGDIDRTREVYERAIANVPPVAEKRYWRRYIYLWINYALFEELQAEDVQRTRRVYRACLDVVPHTSFTFAKVWLLLAKFHVRHKDLGAARKILGQALGMCPKEKLFIGYVQLERDLGEIDRCRKIYRHGSRQGFLEAFPSDCGAWTKFATLEASVGENERARAIFELAIRQPVLDMPETLWKEXXXXXXXXXXXXXXXXXXERLLERTQHVKVWITYAQHEARTAGDLDAARG--VFGRGYEHLRKQGLKEERVKLLEAWRAAEKAEGKGKTTGLQEVESKMPRKFKKKRMMTGTNGEGMGWEEYYDYQFPDDESKPANLKILEMAQKWK---QSGAGEAGLAG 1236
            R  VIYKYALDQMPR+ VP+LYR+F GFEKR G+  GIE+ ++  RR+QYEE+ +A P  YD WFDY RLEESTGD +R REVYERA+A VPPVA+KR+WRRY++LWINYALFEEL A+D  R R V +ACL VVPH SFTFAK+WL+LA   VR +DL AARK+LG A+G CPK KLF GY+ LE  LGEI+RCR +Y       +L   P DC AWT+FA LE ++GE+ERARA+FELAI QP LDMPE L   XXXXXXXXXXXXXXXXXX    ERTQHVKVW +Y   E              VF RGY  LR+  L+EERV LLEAWR  EKA   G    L+ VE++MPR+ KKKRM+ G  GE +GWEEYYDY+FPDDE  PANLKILEMAQKWK   +  A +AG+ G
Sbjct:  259 RARVIYKYALDQMPRDLVPDLYREFAGFEKRRGTPSGIEDAVVGRRRLQYEEEVAADPHAYDTWFDYARLEESTGDGNRVREVYERAVACVPPVAQKRFWRRYVWLWINYALFEELAADDQARARAVLKACLQVVPHESFTFAKIWLMLAHLEVRARDLPAARKVLGNAIGRCPKGKLFKGYIALELQLGEIERCRTLYSR-----YLAWSPGDCAAWTRFAELERTLGEDERARAVFELAIAQPALDMPEALXXXXXXXXXXXXXXXXXXXXXXXXXERTQHVKVWASYGAFEXXXXXXXXXXXXXXVFERGYAALRQMDLREERVILLEAWRDMEKARSGGDAAALRAVEARMPRRLKKKRMLLGDQGEEVGWEEYYDYRFPDDEQAPANLKILEMAQKWKTGLKRKAADAGVDG 670          
BLAST of mRNA_H-elongata_contig17017.4345.1 vs. uniprot
Match: A0A4D9CYM6_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CYM6_9STRA)

HSP 1 Score: 462 bits (1188), Expect = 3.280e-154
Identity = 261/450 (58.00%), Postives = 314/450 (69.78%), Query Frame = 1
Query:    1 RPSVIYKYALDQMPREQVPELYRDFIGFEKRHGSVKGIEEVIINNRRMQYEEQASASPLDYDNWFDYLRLEESTGDIDRTREVYERAIANVPPVAEKRYWRRYIYLWINYALFEELQAEDVQRTRRVYRACLDVVPHTSFTFAKVWLLLAKFHVRHKDLGAARKILGQALGMCP-KEKLFIGYVQLERDLGEIDRCRKIYRHGSRQGFLEAFPSDCGAWTKFATLEASVGENERARAIFELAIRQPVLDMPETLWK---------------EXXXXXXXXXXXXXXXXXXERLLERTQHVKVWITYAQHEARTAGDLDAARGVFGRGYEHLRKQGLKEERVKLLEAWRAAEKAEGKGKTTGLQEVESKMPRKFKKKRMMTGTNGEGMGWEEYYDYQFPDDESKPANLKILEMAQKWKQS-------GAGEAGLAGMKNLWGGGTKRKQGE 1281
            R  VIYKYALD +PRE++PELY+ F+ FEK+HG    IE+V+++ RR QYEE  SA PLDYD WFDY RLEE  G++   REVYERAIAN+PPV EKR+WRRYIYLWINYALFEELQA +V+R R VY+ACL V+PH  FTFAK+W+L A   VR KDLGAARK++GQA+G CP KE LF  Y+QLE  LGE++RCR +Y       +LEA+PS C AW   A LE  VGE ER RA+ ELAI QP LDMPE LWK                XXXXXXXXXXXXXXXXXX     RT+HVKVWI+YA +E    G ++ AR VF RGY HL+ Q LKEER+ LLEAWRA EK +G      L  VE+K+P++ KKKRM+ G +G   GWEEYYDY FPDDE +P+ L IL+ AQ WK +       G  + G AG K   G G ++++GE
Sbjct:  221 RSRVIYKYALDNLPREKIPELYQQFVAFEKKHGDRAAIEDVVVSKRRGQYEEALSADPLDYDVWFDYARLEEGQGELSAVREVYERAIANLPPVPEKRFWRRYIYLWINYALFEELQAGEVERAREVYKACLRVIPHKVFTFAKIWVLAAHLEVRCKDLGAARKLMGQAIGRCPEKESLFKAYIQLELQLGEVERCRTLYAK-----YLEAWPSSCQAWMDMAGLEIGVGERERGRAVLELAINQPALDMPERLWKYYIDFEIEGEDGWXXXXXXXXXXXXXXXXXXXXXXXXXXRTKHVKVWISYATYEGGREGGMEGARAVFERGYAHLKAQELKEERLLLLEAWRALEKEQGD--RASLAAVEAKVPQRLKKKRMVVGEDGREEGWEEYYDYAFPDDEVRPSGLAILQKAQAWKDALAKAKAGGPQQEGDAGTKE-GGVGKRKREGE 662          
BLAST of mRNA_H-elongata_contig17017.4345.1 vs. uniprot
Match: C3YAA6_BRAFL (Uncharacterized protein n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=C3YAA6_BRAFL)

HSP 1 Score: 434 bits (1116), Expect = 7.880e-144
Identity = 218/404 (53.96%), Postives = 281/404 (69.55%), Query Frame = 1
Query:    1 RPSVIYKYALDQMPREQVPELYRDFIGFEKRHGSVKGIEEVIINNRRMQYEEQASASPLDYDNWFDYLRLEESTGDIDRTREVYERAIANVPPVAEKRYWRRYIYLWINYALFEELQAEDVQRTRRVYRACLDVVPHTSFTFAKVWLLLAKFHVRHKDLGAARKILGQALGMCPKEKLFIGYVQLERDLGEIDRCRKIYRHGSRQGFLEAFPSDCGAWTKFATLEASVGENERARAIFELAIRQPVLDMPETLWKEXXXXXXXXXXXXXXXXXXERLLERTQHVKVWITYAQHEARTAGDLDAARG--VFGRGYEHLRKQGLKEERVKLLEAWRAAEKAEGKGKTTGLQEVESKMPRKFKKKRMMTGTNGEGMGWEEYYDYQFPDDESKPANLKILEMAQKWKQ 1206
            R  VIYKYALD++P+++  +L++ +   EK++G   GIE VI++ R+ QYEE+  A+P +YD WFDYLRL ES G +D+  EVYERAIANVPP  EKR+WRRYIYLWINYAL+EEL+A+D++RTR VY+ACL+V+PH  FTFAK+WLL A+F +R K+L  AR++LG A+G CPK+KLF GY++LE  L E DRCR +Y     + FLE  P +C +W KFA LE  +G+ ERARAI+ELAI QP LDMPE LWK                    RLLERTQHVKVWI+YA+ E   AGD  AAR   +F +G   LR    KEER+ LLEAWR  E  E  G    L++V   MP++ KK+R +   +G   GWEEYYDY FP+DE+   NLK+L MA++WK+
Sbjct:  218 RVRVIYKYALDRIPKQEAQDLFKSYTIHEKKYGDRAGIENVIVSKRKFQYEEEVKANPNNYDAWFDYLRLLESDGTVDQVHEVYERAIANVPPTPEKRFWRRYIYLWINYALYEELEAKDMERTRMVYKACLEVIPHKKFTFAKIWLLCAQFEIRQKNLAGARRVLGNAIGRCPKDKLFKGYIELELQLREFDRCRILY-----EKFLEFGPENCTSWIKFAELETILGDVERARAIYELAISQPKLDMPEMLWKSYIDFEIEQEEPQRVRELYGRLLERTQHVKVWISYAKFELSVAGDDMAARARKIFEQGNRSLRSCEEKEERLMLLEAWRDVE--EEAGTAESLEKVNKLMPKRVKKRRKVQTEDGMDAGWEEYYDYIFPEDEANQPNLKLLAMAKRWKE 614          
BLAST of mRNA_H-elongata_contig17017.4345.1 vs. uniprot
Match: A0A7S2BXM5_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BXM5_9STRA)

HSP 1 Score: 427 bits (1098), Expect = 8.970e-143
Identity = 220/409 (53.79%), Postives = 276/409 (67.48%), Query Frame = 1
Query:   28 LDQMPREQVPELYRDFIGFEKRHGSVKGIEEVIINNRRMQYEEQASASPLDYDNWFDYLRLEESTGDIDRTREVYERAIANVPPVAEKRYWRRYIYLWINYALFEELQAEDVQRTRRVYRACLDVVPHTSFTFAKVWLLLAKFHVRHKDLGAARKILGQALGMCP---KEKLFIGYVQLERDLGEIDRCRKIYRHGSRQGFLEAFPSDCGAWTKFATLEASVGENERARAIFELAIRQPVLDMPETLWK-----EXXXXXXXXXXXXXXXXXXERLLERTQHVKVWITYAQHEARTAGDLDAARGVFGRGYEHLRKQGLKEERVKLLEAWRAAEKAEGKGKTTGLQEVESKMPRKFKKKRMMTGTNGEGMGWEEYYDYQFPDDESKPANLKILEMAQKWKQSGAGEAGL 1230
            LD + R+++PELY++FI FEK+ G   GIEEVI+  RR+QYEE  +A   DYD WFDY+RLE++ GD+DRTR+V+ERAIA VPPV EKR+WRRY+Y+WI+YALFEEL A+D+ +TR VY+A L V+PH+ F+FAK+W++ A F VR KDL AARK++GQA+G C    KEK F  Y+ LER LGE+DRCR +Y       +LE  P++C AW  FA              IFELA+ Q  LDMPE LWK     E                  ERLL+RT+HVKVWI+YA  EA   G +D  R V  + Y  L+ +GLK+ERV LLEAWRA EKA+   +   L EV   MPRK KK+RM+TG NGE  GWEEY+DYQFPDD   P NLKILEMA KWK++ A +  L
Sbjct:   97 LDHIGRDKMPELYQEFIQFEKKFGKKDGIEEVILGKRRLQYEEAVAADSHDYDTWFDYIRLEQAEGDLDRTRDVFERAIAQVPPVLEKRFWRRYVYIWIHYALFEELDADDMDKTRAVYQASLQVIPHSHFSFAKLWIMAAHFEVRQKDLQAARKLMGQAIGRCSLLGKEKPFKDYIHLERQLGEVDRCRTLYSK-----YLEVVPTNCAAWGHFAXXXXXXXXXXXXXXIFELAVGQQTLDMPEMLWKQYIDFEINDAKAEESGAGRVRELYERLLDRTKHVKVWISYATFEASEGGGIDDCRSVMRKAYGVLKDEGLKDERVVLLEAWRALEKAQPI-ELQQLTEVSKLMPRKLKKRRMVTGDNGEDTGWEEYFDYQFPDDRVAPMNLKILEMAHKWKENRASKQPL 499          
BLAST of mRNA_H-elongata_contig17017.4345.1 vs. uniprot
Match: A0A8C7PZA1_ONCMY (Crooked neck pre-mRNA splicing factor 1 n=1 Tax=Oncorhynchus mykiss TaxID=8022 RepID=A0A8C7PZA1_ONCMY)

HSP 1 Score: 432 bits (1111), Expect = 2.350e-142
Identity = 217/404 (53.71%), Postives = 278/404 (68.81%), Query Frame = 1
Query:    1 RPSVIYKYALDQMPREQVPELYRDFIGFEKRHGSVKGIEEVIINNRRMQYEEQASASPLDYDNWFDYLRLEESTGDIDRTREVYERAIANVPPVAEKRYWRRYIYLWINYALFEELQAEDVQRTRRVYRACLDVVPHTSFTFAKVWLLLAKFHVRHKDLGAARKILGQALGMCPKEKLFIGYVQLERDLGEIDRCRKIYRHGSRQGFLEAFPSDCGAWTKFATLEASVGENERARAIFELAIRQPVLDMPETLWKEXXXXXXXXXXXXXXXXXXERLLERTQHVKVWITYAQHEAR--TAGDLDAARGVFGRGYEHLRKQGLKEERVKLLEAWRAAEKAEGKGKTTGLQEVESKMPRKFKKKRMMTGTNGEGMGWEEYYDYQFPDDESKPANLKILEMAQKWKQ 1206
            R  VIYKYALD++P+ Q  EL++ +  FEK+ G  +GIE+VI++ RR QYEE+  ASP +YD WFDYLRL ES  D D  REVYERAIAN+PP+ EKR+WRRYIYLWINYAL+EEL+ +D +RTR+VY+ACLD++PH  FTFAK+WLL  +F +R K+L AAR+ LG A+G CPK KLF GY++LE  L E DRCRK+Y     + +LE  P +C  W KF+ LE  +G+ ERARAIFELAI QP LDMPE LWK                   +RLL+RTQHVKVWI+YAQ+E    T+  L   RG+F  G + LR    KEER+ LLE+W+  E+  G   T   + V+  +P K KK+R +T  +G   GWEEYYDY FP+D +   NLK+L MA+ WK+
Sbjct:  226 RVRVIYKYALDRIPKHQAQELFKFYTVFEKKFGDRRGIEDVIVSKRRFQYEEEVKASPHNYDAWFDYLRLVESDADPDTAREVYERAIANIPPIQEKRHWRRYIYLWINYALYEELEVKDPERTRQVYQACLDLIPHKKFTFAKIWLLYGQFEIRQKNLQAARRGLGTAIGKCPKNKLFKGYIELELQLREFDRCRKLY-----EKYLEFAPENCTTWIKFSELETILGDTERARAIFELAIGQPRLDMPEVLWKSYIDFEIEQEEFDNTRGLYQRLLQRTQHVKVWISYAQYELSIDTSDRLQRCRGIFEEGNKGLRSCEEKEERLMLLESWKEFEQEFGSDTTR--ERVKKLLPEKVKKRRKLTAEDGSDAGWEEYYDYIFPEDAANQPNLKLLAMAKMWKR 622          
BLAST of mRNA_H-elongata_contig17017.4345.1 vs. uniprot
Match: A0A6P5AGK2_BRABE (crooked neck-like protein 1 n=3 Tax=Branchiostoma TaxID=7737 RepID=A0A6P5AGK2_BRABE)

HSP 1 Score: 434 bits (1116), Expect = 1.850e-141
Identity = 218/404 (53.96%), Postives = 281/404 (69.55%), Query Frame = 1
Query:    1 RPSVIYKYALDQMPREQVPELYRDFIGFEKRHGSVKGIEEVIINNRRMQYEEQASASPLDYDNWFDYLRLEESTGDIDRTREVYERAIANVPPVAEKRYWRRYIYLWINYALFEELQAEDVQRTRRVYRACLDVVPHTSFTFAKVWLLLAKFHVRHKDLGAARKILGQALGMCPKEKLFIGYVQLERDLGEIDRCRKIYRHGSRQGFLEAFPSDCGAWTKFATLEASVGENERARAIFELAIRQPVLDMPETLWKEXXXXXXXXXXXXXXXXXXERLLERTQHVKVWITYAQHEARTAGDLDAARG--VFGRGYEHLRKQGLKEERVKLLEAWRAAEKAEGKGKTTGLQEVESKMPRKFKKKRMMTGTNGEGMGWEEYYDYQFPDDESKPANLKILEMAQKWKQ 1206
            R  VIYKYALD++P+++  +L++ +   EK++G   GIE VI++ R+ QYEE+  A+P +YD WFDYLRL ES G +D+ REVYERAIANVPP  EKR+WRRYIYLWINY L+EEL+A+D++RTR VY+ACL+V+PH  FTFAK+WLL A+F VR K+L  AR++LG A+G CPK+KLF GY++LE  L E DRCR +Y     + FLE  P +C +W KFA LE  +G+ ERARAI+ELAI QP LDMPE LWK                    RLLERTQHVKVWI+YA+ E   AG+  AAR   +F +G   LR    KEER+ LLEAWR  E  E  G    L++V   MP++ KK+R +   +G   GWEEYYDY FP+DE+   NLK+L MA++WK+
Sbjct:  273 RVRVIYKYALDRIPKQEAQDLFKSYTIHEKKYGDRAGIENVIVSKRKFQYEEEVKANPNNYDAWFDYLRLLESDGTVDQVREVYERAIANVPPTPEKRFWRRYIYLWINYGLYEELEAKDMERTRMVYKACLEVIPHKKFTFAKIWLLCAQFEVRQKNLAGARRVLGNAIGRCPKDKLFKGYIELELQLREFDRCRILY-----EKFLEFGPENCTSWIKFAELETILGDVERARAIYELAISQPKLDMPEMLWKSYIDFEIEQEEPQRVRELYSRLLERTQHVKVWISYAKFELSVAGEDMAARARKIFEQGNRALRNCEEKEERLMLLEAWRDVE--EEAGSVESLEKVNKLMPKRVKKRRKVQTEDGMDAGWEEYYDYIFPEDEANQPNLKLLAMAKRWKE 669          
BLAST of mRNA_H-elongata_contig17017.4345.1 vs. uniprot
Match: A0A3B3IGK4_ORYLA (Crooked neck pre-mRNA splicing factor 1 n=8 Tax=Oryzias TaxID=8089 RepID=A0A3B3IGK4_ORYLA)

HSP 1 Score: 431 bits (1108), Expect = 2.850e-141
Identity = 217/404 (53.71%), Postives = 277/404 (68.56%), Query Frame = 1
Query:    1 RPSVIYKYALDQMPREQVPELYRDFIGFEKRHGSVKGIEEVIINNRRMQYEEQASASPLDYDNWFDYLRLEESTGDIDRTREVYERAIANVPPVAEKRYWRRYIYLWINYALFEELQAEDVQRTRRVYRACLDVVPHTSFTFAKVWLLLAKFHVRHKDLGAARKILGQALGMCPKEKLFIGYVQLERDLGEIDRCRKIYRHGSRQGFLEAFPSDCGAWTKFATLEASVGENERARAIFELAIRQPVLDMPETLWKEXXXXXXXXXXXXXXXXXXERLLERTQHVKVWITYAQHEARTAGD--LDAARGVFGRGYEHLRKQGLKEERVKLLEAWRAAEKAEGKGKTTGLQEVESKMPRKFKKKRMMTGTNGEGMGWEEYYDYQFPDDESKPANLKILEMAQKWKQ 1206
            R  VIYKYALD++P+ Q  EL++++  FEK+ G  +GIE+VIIN RR QYEE+  A+PL+YD WFDYLRL ES GD D  R+VYERAIAN+PP+ EKR+WRRYIYLWINYAL+EEL+ +D +RTR+VY+ACLD++PH  FTFAK+WLL A+F +R K+L AARKI+G A+G CPK KL  GY++LE  L E DRCRK+Y     + +LE  P +C  W KFA LE  +G+ ER+RAIFELAI QP LDMPE LWK                   +RLL+RTQHVKVWI+YA+ E    G   L   R +F    + +R    KEER+ LLE+WR  EK  G   +   + V   +P K KK+R +T  +G   GWEEYYDY FP+D +   NLK+L MA+ WK+
Sbjct:  269 RVRVIYKYALDKIPKNQAQELFKNYTMFEKKFGDRRGIEDVIINKRRFQYEEEVKANPLNYDAWFDYLRLVESDGDPDTVRDVYERAIANIPPIQEKRHWRRYIYLWINYALYEELEVKDPERTRQVYQACLDLMPHKKFTFAKIWLLFAQFEIRQKNLQAARKIMGTAIGKCPKNKLLKGYIELELQLREFDRCRKLY-----EKYLEFSPENCTTWIKFAELETILGDVERSRAIFELAIGQPRLDMPEVLWKSYIDFEIEQEEFENTRNLYKRLLQRTQHVKVWISYAKFELSVDGPDRLAKCRQIFEEANKSMRNCEEKEERLMLLESWRDYEKEFGSDSSR--ERVSKLLPEKVKKRRKLTAEDGSDAGWEEYYDYIFPEDAANQPNLKLLAMAKMWKR 665          
BLAST of mRNA_H-elongata_contig17017.4345.1 vs. uniprot
Match: A0A4W5MS29_9TELE (Crooked neck pre-mRNA splicing factor 1 n=14 Tax=Euteleosteomorpha TaxID=1489388 RepID=A0A4W5MS29_9TELE)

HSP 1 Score: 430 bits (1105), Expect = 2.890e-141
Identity = 216/404 (53.47%), Postives = 277/404 (68.56%), Query Frame = 1
Query:    1 RPSVIYKYALDQMPREQVPELYRDFIGFEKRHGSVKGIEEVIINNRRMQYEEQASASPLDYDNWFDYLRLEESTGDIDRTREVYERAIANVPPVAEKRYWRRYIYLWINYALFEELQAEDVQRTRRVYRACLDVVPHTSFTFAKVWLLLAKFHVRHKDLGAARKILGQALGMCPKEKLFIGYVQLERDLGEIDRCRKIYRHGSRQGFLEAFPSDCGAWTKFATLEASVGENERARAIFELAIRQPVLDMPETLWKEXXXXXXXXXXXXXXXXXXERLLERTQHVKVWITYAQHEAR--TAGDLDAARGVFGRGYEHLRKQGLKEERVKLLEAWRAAEKAEGKGKTTGLQEVESKMPRKFKKKRMMTGTNGEGMGWEEYYDYQFPDDESKPANLKILEMAQKWKQ 1206
            R  VIYKYALD++P+ Q  EL++ +  FEK+ G  +GIE+VI++ RR QYEE+  ASP +YD WFDYLRL ES  D D  REVYERAIAN+PP+ EKR+WRRYIYLWINYAL+EEL+ +D +RTR+VY+ACLD++PH  FTFAK+WLL  +F +R K+L AAR+ LG A+G CPK KLF GY++LE  L E DRCRK+Y     + +LE  P +C  W KF+ LE  +G+ ERARAIFELAI QP LDMPE LWK                   +RLL+RTQHVKVWI+YAQ+E    T+  L   RG+F    + LR    KEER+ LLE+W+  E+  G   T   + V+  +P K KK+R +T  +G   GWEEYYDY FP+D +   NLK+L MA+ WK+
Sbjct:  279 RVRVIYKYALDRIPKHQAQELFKFYTVFEKKFGDRRGIEDVIVSKRRFQYEEEVKASPHNYDAWFDYLRLVESDADPDTAREVYERAIANIPPIQEKRHWRRYIYLWINYALYEELEVKDPERTRQVYQACLDLIPHKKFTFAKIWLLYGQFEIRQKNLQAARRGLGTAIGKCPKNKLFKGYIELELQLREFDRCRKLY-----EKYLEFAPENCTTWIKFSELETILGDTERARAIFELAIGQPRLDMPEVLWKSYIDFEIEQEEYDNTRGLYQRLLQRTQHVKVWISYAQYELSIDTSDRLQRCRGIFEEANKGLRSCEEKEERLMLLESWKEFEQEFGSDTTR--ERVKKLLPEKVKKRRKLTAEDGSDAGWEEYYDYIFPEDAANQPNLKLLAMAKMWKR 675          
BLAST of mRNA_H-elongata_contig17017.4345.1 vs. uniprot
Match: A0A3N0Z386_ANAGA (Crooked neck-like protein 1 n=1 Tax=Anabarilius grahami TaxID=495550 RepID=A0A3N0Z386_ANAGA)

HSP 1 Score: 422 bits (1084), Expect = 2.510e-140
Identity = 213/404 (52.72%), Postives = 271/404 (67.08%), Query Frame = 1
Query:    1 RPSVIYKYALDQMPREQVPELYRDFIGFEKRHGSVKGIEEVIINNRRMQYEEQASASPLDYDNWFDYLRLEESTGDIDRTREVYERAIANVPPVAEKRYWRRYIYLWINYALFEELQAEDVQRTRRVYRACLDVVPHTSFTFAKVWLLLAKFHVRHKDLGAARKILGQALGMCPKEKLFIGYVQLERDLGEIDRCRKIYRHGSRQGFLEAFPSDCGAWTKFATLEASVGENERARAIFELAIRQPVLDMPETLWKEXXXXXXXXXXXXXXXXXXERLLERTQHVKVWITYAQHEARTAGD--LDAARGVFGRGYEHLRKQGLKEERVKLLEAWRAAEKAEGKGKTTGLQEVESKMPRKFKKKRMMTGTNGEGMGWEEYYDYQFPDDESKPANLKILEMAQKWKQ 1206
            R  VIYKYALD++P++Q  EL++++  FEKR G  +GIE+VI++ RR QYEE+  ASP +YD WFDYLRL ES  D D  REVYERAIAN+PP+ EKR+WRRYIYLWINYAL+EEL+ +D +RTR+VY+ACL+V+PH  FTFAK+WLL  +F +R K+L  AR+ LG A+G CPK KLF GY++LE  L E DRCRK+Y     + +LE  P +C  W KFA LE  +G+ ERARAIFELAI QP LDMPE LWK                   +RLL+RTQHVKVWI+YAQ E     D  +   R ++    + +     KEER+ LLE+WR  E  E  G       V   +P K KK+R +T  +G   GWEEYYDY FP+D +   NLK+L MA+ WK+
Sbjct:   61 RVRVIYKYALDRIPKQQAQELFKNYTVFEKRFGDRRGIEDVIVSKRRFQYEEEVKASPHNYDAWFDYLRLVESDADADTVREVYERAIANIPPIQEKRHWRRYIYLWINYALYEELEVKDPERTRQVYQACLEVIPHKKFTFAKIWLLYGQFEIRQKNLQNARRGLGTAIGKCPKNKLFKGYIELELQLREFDRCRKLY-----EKYLEFSPENCTTWIKFAELETILGDTERARAIFELAIGQPRLDMPEVLWKSYIDFEIEQEEYDNTRGLYKRLLQRTQHVKVWISYAQFEMSIDSDDRIQRCRQIYEEANKSMHGCEEKEERLMLLESWREFE--EEFGSFANKDRVRKLLPEKVKKRRKITAEDGSDAGWEEYYDYIFPEDAANQPNLKLLAMAKMWKK 457          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig17017.4345.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LLC4_ECTSI2.790e-23786.02Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZA95_9STRA1.790e-15762.35Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A4D9CYM6_9STRA3.280e-15458.00Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
C3YAA6_BRAFL7.880e-14453.96Uncharacterized protein n=1 Tax=Branchiostoma flor... [more]
A0A7S2BXM5_9STRA8.970e-14353.79Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A8C7PZA1_ONCMY2.350e-14253.71Crooked neck pre-mRNA splicing factor 1 n=1 Tax=On... [more]
A0A6P5AGK2_BRABE1.850e-14153.96crooked neck-like protein 1 n=3 Tax=Branchiostoma ... [more]
A0A3B3IGK4_ORYLA2.850e-14153.71Crooked neck pre-mRNA splicing factor 1 n=8 Tax=Or... [more]
A0A4W5MS29_9TELE2.890e-14153.47Crooked neck pre-mRNA splicing factor 1 n=14 Tax=E... [more]
A0A3N0Z386_ANAGA2.510e-14052.72Crooked neck-like protein 1 n=1 Tax=Anabarilius gr... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig17017contigH-elongata_contig17017:362..6437 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score683.7
Seed ortholog evalue5.8e-194
Seed eggNOG ortholog2880.D8LLC4
Preferred nameCRNKL1
KEGG koko:K12869
KEGG Pathwayko03040,map03040
KEGG ModuleM00355
GOsGO:0000245,GO:0000375,GO:0000377,GO:0000398,GO:0000974,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005681,GO:0005684,GO:0006139,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008380,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016071,GO:0022607,GO:0022613,GO:0022618,GO:0031974,GO:0031981,GO:0032991,GO:0034622,GO:0034641,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0046483,GO:0065003,GO:0070013,GO:0071007,GO:0071010,GO:0071011,GO:0071012,GO:0071013,GO:0071014,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1902494,GO:1990904
EggNOG free text desc.spliceosomal complex assembly
EggNOG OGsKOG1915@1,KOG1915@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03036,ko03041
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionHAT (Half-A-TPR) repeat
Ec32 orthologEc-27_002100.1
Exons9
Model size1356
Cds size1356
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929992.0456834-CDS-H-elongata_contig17017:361..4811622929992.0456834-CDS-H-elongata_contig17017:361..481Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17017 362..481 +
1691679237.820508-CDS-H-elongata_contig17017:361..4811691679237.820508-CDS-H-elongata_contig17017:361..481Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17017 362..481 +
1622929992.0597386-CDS-H-elongata_contig17017:2172..22981622929992.0597386-CDS-H-elongata_contig17017:2172..2298Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17017 2173..2298 +
1691679237.838181-CDS-H-elongata_contig17017:2172..22981691679237.838181-CDS-H-elongata_contig17017:2172..2298Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17017 2173..2298 +
1622929992.0724597-CDS-H-elongata_contig17017:3035..31671622929992.0724597-CDS-H-elongata_contig17017:3035..3167Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17017 3036..3167 +
1691679237.8594391-CDS-H-elongata_contig17017:3035..31671691679237.8594391-CDS-H-elongata_contig17017:3035..3167Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17017 3036..3167 +
1622929992.0846043-CDS-H-elongata_contig17017:3448..35741622929992.0846043-CDS-H-elongata_contig17017:3448..3574Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17017 3449..3574 +
1691679237.8703444-CDS-H-elongata_contig17017:3448..35741691679237.8703444-CDS-H-elongata_contig17017:3448..3574Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17017 3449..3574 +
1622929992.1003256-CDS-H-elongata_contig17017:4002..41161622929992.1003256-CDS-H-elongata_contig17017:4002..4116Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17017 4003..4116 +
1691679237.880793-CDS-H-elongata_contig17017:4002..41161691679237.880793-CDS-H-elongata_contig17017:4002..4116Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17017 4003..4116 +
1622929992.1132002-CDS-H-elongata_contig17017:4384..45491622929992.1132002-CDS-H-elongata_contig17017:4384..4549Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17017 4385..4549 +
1691679237.8992789-CDS-H-elongata_contig17017:4384..45491691679237.8992789-CDS-H-elongata_contig17017:4384..4549Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17017 4385..4549 +
1622929992.1260085-CDS-H-elongata_contig17017:4867..50551622929992.1260085-CDS-H-elongata_contig17017:4867..5055Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17017 4868..5055 +
1691679237.913127-CDS-H-elongata_contig17017:4867..50551691679237.913127-CDS-H-elongata_contig17017:4867..5055Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17017 4868..5055 +
1622929992.138595-CDS-H-elongata_contig17017:5505..55751622929992.138595-CDS-H-elongata_contig17017:5505..5575Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17017 5506..5575 +
1691679237.928289-CDS-H-elongata_contig17017:5505..55751691679237.928289-CDS-H-elongata_contig17017:5505..5575Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17017 5506..5575 +
1622929992.1535804-CDS-H-elongata_contig17017:6122..64371622929992.1535804-CDS-H-elongata_contig17017:6122..6437Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17017 6123..6437 +
1691679237.9385865-CDS-H-elongata_contig17017:6122..64371691679237.9385865-CDS-H-elongata_contig17017:6122..6437Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17017 6123..6437 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig17017.4345.1prot_H-elongata_contig17017.4345.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig17017 362..6437 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig17017.4345.1

>prot_H-elongata_contig17017.4345.1 ID=prot_H-elongata_contig17017.4345.1|Name=mRNA_H-elongata_contig17017.4345.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=452bp
RPSVIYKYALDQMPREQVPELYRDFIGFEKRHGSVKGIEEVIINNRRMQY
EEQASASPLDYDNWFDYLRLEESTGDIDRTREVYERAIANVPPVAEKRYW
RRYIYLWINYALFEELQAEDVQRTRRVYRACLDVVPHTSFTFAKVWLLLA
KFHVRHKDLGAARKILGQALGMCPKEKLFIGYVQLERDLGEIDRCRKIYR
HGSRQGFLEAFPSDCGAWTKFATLEASVGENERARAIFELAIRQPVLDMP
ETLWKEYIDFEADNDETQRARDLFERLLERTQHVKVWITYAQHEARTAGD
LDAARGVFGRGYEHLRKQGLKEERVKLLEAWRAAEKAEGKGKTTGLQEVE
SKMPRKFKKKRMMTGTNGEGMGWEEYYDYQFPDDESKPANLKILEMAQKW
KQSGAGEAGLAGMKNLWGGGTKRKQGELEGSPKALAANEEGDDEEIYLDD
EE
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mRNA from alignment at H-elongata_contig17017:362..6437+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig17017.4345.1 ID=mRNA_H-elongata_contig17017.4345.1|Name=mRNA_H-elongata_contig17017.4345.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=6076bp|location=Sequence derived from alignment at H-elongata_contig17017:362..6437+ (Himanthalia elongata Himel1 dioecious)
CGACCCAGTGTGATCTACAAATACGCATTGGACCAGATGCCGCGAGAGCA GGTCCCCGAGCTCTACCGTGACTTCATCGGCTTCGAGAAGAGGCATGGCT CCGTAAAAGGCATCGAAGAGGTAACCTCGGAACCTAGTAGCTGTAACTTC GCTGTGACGAAATCCTACTTAGATTTCCTTTATTTTCTCTCATTATTTTT ATCGCTGTTTGGTTTGTAAGTCAATCGACCAGCTATATTCTCTCTCTCTT TATATATATATGATATTTTACTGTAATAATCACACCCGACACAACGTGGC CCATCCCGCCTGTGGCCGTAAGGATTCTCCCGCCCGGTTGGATAACGCCT ACGCAAGTTTGGTACCACTCTTAAACCTCATCAACTCATAAGTGACGTTG CTTCCTCACCTTCTCATGCTTTCTGCTGCAGCTCCTCATGATTTTTTTAT CTAGCGAAAATGGCTGCTGTGGTGACTGGTTCTCGACTAGGCTTGACCAC TCGAGTAACGTATGTCCTACAGCGAAATACACTCACCCGTTCTGCGATGA AAGCATTCGTAAGAATCGTTCTAACAATAAAATTGCTGATATGTAGTGGT TGGTGGAAACACCTCTTGGGCGCGCTTAGCGATATTAAAAAACCCCACAG GACACGAACAGGACACGACCGTCTGAGAGTTTTCTCTAGATCTCGTCGAT CTCTGGGATTTACGATATTGCTCTGGACTATCATAGATCAATTTTACTCT TAAGAGTCCGTGTTTTGAAGAGCGAGGCTGAAAATTATTTTTGAAAATTG CTGTGTCCAAATCCATGGTACAAAAGTGCTATCCCTGAGAACAGCCATCC ATAAGAACTCCGGGTTCCATATCTATGATCTAGTTTCAATAGGGGGGTCA TCGAGAACGACGCCTCGGGAGCAAATGTTTCAGCACTTTTCGCTGAACCC CCGTCCCCCTTCACGTCTTGCGTTTTGAGAGCGTCTCGTTGTTCACGTCT GCGCGCCCGCGGGGGGCCTCCATTATGAACCCGTACTATGCGAGGAGTAT TCATCAGCAGACTAACAATATACTGTAAATAGTATAGAATATAGAGTATA TAGTATATAATAGTCTGAATGTATCACACATGTTATACCGTTCTGTTCTT GGTGTGCGTGCGGCGCTTAGGCGTTTGCGCGGAAATCAAAGCCCCTTTGT CTTATTTACAGTATAGATATGGTATATTATAGTATATATATATATTTATT TTTTGATTGATTGAATTCTTACATAAGCTGATGTCAAAATCAAGCCCGTG GTCACACCATCCGGAAGGAGGAAAACGTTCAAGGTACTCTCCAATACAAA ATGAAACGGCAATAATGGCTCACAATACACAAACAGTACAGTATAGTATA GTATAGTATAGTCGCGCCCGCTGAATGTGCATCATTTAGTTACTATACCC GATGTGTCCAATGAAACCATGTCATATCCGTTTTAGCGTGGCAAACGCAA GGGTGATGACTAAATAGAGGCTGGTATCATCCTTGAAAACGCAGTCTGGC CGGAGAAAACCCGGTATCATATCGCTCCGTCCCGTCATGGTTGGGATGCG TGATCTATATATCCGTTTGGATATAACATACGTTTAGCAACCCCCCCCCC CCTCCTTCCCCTCCCCCTCTCTCTTCACCCTTTTCCGAAACAGTGGGAAA CCCCGGGAGGCGTGAAGAAAGGAGATGTTAGCTGGCGTAGTATCTCGACC CGTAGAGAAACGTTCTGTTTGTTTCTTGCTTTGTCGTATATCCTGCGTCC TGTTGACGAAGGTGATTATCAACAATCGGAGGATGCAGTACGAGGAGCAA GCATCTGCATCACCGCTGGACTACGACAACTGGTTCGACTATCTCAGGCT GGAGGAGTCGACGGGAGACATCGACCGCACCAGAGAGGTAATCCTGTCTT CGGGATGATGCAAATATCGAAGAAAATATATAATGTTATACTCTGTGTGT TGTCTTTTTTTATATCAGTCGAAGAGGGGCTTCTCGTGGGGTGTGCCTCT TGTCTTTTTCGAGACGTGCGCCGTGAACGAACGCTCCCGCTTGTACTCGT CTGTTGCTGCTGTCGCTTCTGCGATATCGTGATTGGTGGTTGTAGTCGGA ATCGATACGGCATCGCGTTGTCACCATGATGTGCTAGTAATATCAACCAG ACTCTGATGCCCGAGTAGCTCAAATGGGTACAGTAACGACGGAAGTGGTG GGTTGGAATCCCACCGGTTTTTAGCTATTTTCTTTCTGCAGCGGTCATAG TCTATAACGTGAGAACGAGAGTAAGCAAAGTTCAACCATTGGGCAACGAG GTATAGGGGTGGGCTAAGCTTGCATCGCGATAAAACCCCATACAGTGGGC GTTAATTAGCCGGTAAGAGATGTGTTGGTTGATCAAGATAGACCCCTTAG AACCACGGCGGCGGGTTGGACATCGGTTGAAGCATTAGTAGCACGGTGGT ATTGGTAACCTTTTAGTAGCACGGTGGATGTCTTCTCTCATCTTTAAAAA GAGGTATTCAAAACAAACAGAGCCGTTCCACCGTTCGAGAATGAATTTAA TAATAACAGAGGGACATGTTATTTTGTGTTGTTGTTGTTGTTGTTGTATC GTCTGTCTGCTGTATCGGGAAAAGGTGTACGAACGCGCCATCGCCAATGT TCCACCGGTGGCGGAGAAGCGGTACTGGCGCCGCTACATCTATCTGTGGA TAAACTACGCGCTGTTCGAGGAGTTGCAGGCCGAAGATGTCCAGCGCACT CGGCGAGTTGGGAGTTTGGAGTGGTTTCTCGGGGAGAAGCGTTGTTTGAG AAGCAGGAGAGACTAGACCGCGCTTTTATCAGATTTTCGGGAAGCGGATG AAACGGACCACACAAGGGTGACATTGACAGATGCAGGAAGGGCAATACTG ATAGAAATATTGTTTGGGTGCGAATGTGTAATGCCTTCTTTTGCTGTTGT TACGCCGCGCCCCCTCATCCCTCCCCTGCAAAAACGCCTCCGTCGAAACA CCTCCCCCCTCTGTGGTCTTTGTACACGCCCAGCGAGGTATACCGAGCAT GTCTGGACGTGGTACCCCACACGTCCTTCACGTTCGCCAAAGTGTGGCTC CTACTCGCCAAGTTCCACGTTCGCCACAAGGACCTCGGTGCTGCCCGGAA GATCCTGGGACAGGTGACAAGAGACTGATGAGACATGACTGTCGGGGGAC TCCTAAAACTCGGGCGGGCTTTGATGGGATAAAGAAGAGGGTTTTTACTA TTTTTAGGCTATTAAAAGCCAGCGGTAGCAACAGCTGCAAACATCGAGCG TGCCTTGGTATCTTGTTGGTTACACGCGTTCGGCGGTGTTCCGCGGGCGC AGGACAGCGTAGAGGTAAAATGCGTTTGCTTGGGGGGAAGGGCGGAGAGG GAACGGGGGAGTCCGAATATTTTTGTGTAATCACAGGACAGTAAAGCCAT GGGGGTGACGGGACTGGTTTTGGTTAAGTACTTCTTGAGGTTGTCGCTGT GTTGGGATTTGGTGACCAGCACGCGCTTCTGTGTCCCTCTCGTCACACAC ACACACACAGAGAGACTATCCGTACGCGCCGCATCGTGCAGGCCTTGGGG ATGTGTCCCAAGGAGAAGCTCTTCATCGGCTACGTCCAACTCGAGAGGGA CCTGGGAGAGATCGACCGCTGTCGCAAGATATACAGGCACGGTTCTCGCC AAGGTGTTTTTGGTTGACGGTTGATCCCTGCTGGCCCCGCTGGAGGGCTG TCGCTGTGTCGCCATTCCTGTTGCTGCAGATGATGAGCACAAATGTTACG TTCCCAATGTTTGAAGGTCGTGCGTACCGGTAGTCTCGGGACTGTGTCGT CCCCCCCCCCCTCTCCCCGTCGGTTATATTATTCTGCAGCCTTCGGCGGA CTTAGCGTTTTACCTGCCACAAAGGGTTTTTCGGCTGATCCCGTCCCATT TCTCCGTACCAACGTCCAGCAAGTTCTTGGAGGCGTTTCCGAGTGACTGC GGCGCGTGGACAAAGTTCGCGACTCTGGAGGCTTCCGTAGGAGAGAATGA GAGGGCGCGCGCCATTTTCGAGCTCGCTATCCGCCAGCCTGTGCTCGACA TGCCGGAGACGCTGTGGAAGGAGTATATCGATTTTGAGGTGTGGGGTAAA CGGATCCACGGTATTTGAGATAACAGGGCGTGTGCGTATGTCATACCAGC CCGCCCGCCATCTTTCCCCACCCCCCTCCACACTTGAGGTGGTTACTGTT TCCCTTGGATGGGCTTGAACCGCCACAGCAGAGGCCGAGGCCTCAGCAGA AAGCCGGGTCGCTCTGCTTCTGATGCCCTCAAATCGAGATCAATGTCGGG GCGCACGTGTCTGGTCCGTTGTCGGTCGGCAACAGAAGAAACGAGCTCTG GCCGTGACCTCCGCCCTTGCGCCCCGGACCGTTGTCCCATTTTCGTTTCT GCTCAGGCGGACAATGACGAGACACAGAGGGCGCGGGACCTCTTCGAGAG GCTCTTGGAGCGAACGCAGCACGTAAAGGTGTGGATCACATACGCGCAGC ACGAGGCAAGAACAGCGGGGGATCTGGATGCTGCGAGAGGCGTTTTCGGT CGGGGGTACGAACACCTTCGCAAACAGGGGCTCAAGGAGGAGAGGTGCGC TCGCGGGGGCAGAACCTCTTTTTGTTTATCATTGTCTCGCTGTCATACAT GTCCCGTTACGTAAACATCCACCCGAAACGTTTTTCACAGGCAGTTTCAC CCTGGGGCCCTGTTTGATCCCCCCCTTATTCCCTCGCAGACCAACATAAA TAATCTGGTAGCCGAAGGTCCTGGGGGGAAAAGATGTAAGGCATCGTGTG GCTAAAATAAATATCTCCCTCAATAATGTAACCGCGCGGAGAATACTTCT GGAGGCCCGCTATGAACTAGAATAATACATTAGAAAATTCTGGCAACTGC GCAGTATTCGAACACACTCGCACTCCCCTGGCAGGCCATGTGTAGATAAA GGTAGAGCCATCCCAAAACTCTTTCGGCTGCCCATGTCTGCGTTATGCGT TATGGGTCTCCGTTGGCTCGGCGGCGTCGGAAAACGCCTTTCAGGGTGAA GCTCTTGGAGGCATGGAGAGCAGCGGAGAAGGCGGAAGGCAAGGGCAAGA CGACGGGTCTCCAGGTGGGTAGAGCAGCTTATCATTCTGCAGTGCGTGAA GTGTTGGAGTCTAGTGGTCGGTCTCACTTTGGCCTCACCTTTTTTTCTTC TCTCGAGTACGTGCCGCAGTTGAGACAGCATGGCACACGCCGGGGGTATG GAGAGGAGAGGGGATTATTGATGAGCGTCCCCGTTGTTTTTATTGGTATC AATGACCCGAAGGCGGTGAAGGGAAATTACTCGCAATGCCCACGACGCCG ATGCGGCCTGTGTTGGTGTTGTTGAGGAGTAAGGGGGGGATTTGTAAATC TCGGATGTATTTGAATTGGGTTGTTTTGTGCGTGTCAGATTACGGGTATG CATTCGCGCAATGATGCGGTCTTCGCTCGTGTGGAACGTGATGCGTTGTG CCCCCCCCCCCCCCCGGAGGTGGCAAGCCAGATGCCGCGAAAGTTCAAAC AGAAGCGGAGGANNNNNNNNNNGTGGTGAGGTTGGGGGTCTTGTTCGCGC CAGGGCGGGGGTGTGCCTGTTGGGGGAGCGGTGGGGGGGTGGACCCCCCC CCCCCCCCCAGGAGGTGGAAAGCAAGATGCCGCGAAAGTTCAAGAAGAAG CGGATGATGACGGGGACGAACGGGGAGGGCATGGGCTGGGAGGAATATTA CGATTACCAATTCCCGGACGACGAATCAAAGCCCGCCAACCTCAAGATCC TCGAGATGGCGCAGAAGTGGAAGCAAAGCGGGGCGGGGGAGGCGGGCCTT GCGGGCATGAAGAATCTTTGGGGTGGAGGCACCAAGCGCAAGCAGGGGGA GTTGGAGGGTAGCCCGAAAGCGTTGGCGGCGAATGAGGAGGGAGACGACG AGGAGATATATTTGGATGACGAGGAG
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Coding sequence (CDS) from alignment at H-elongata_contig17017:362..6437+

>mRNA_H-elongata_contig17017.4345.1 ID=mRNA_H-elongata_contig17017.4345.1|Name=mRNA_H-elongata_contig17017.4345.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2712bp|location=Sequence derived from alignment at H-elongata_contig17017:362..6437+ (Himanthalia elongata Himel1 dioecious)
CGACCCAGTGTGATCTACAAATACGCATTGGACCAGATGCCGCGAGAGCA
GGTCCCCGAGCTCTACCGTGACTTCATCGGCTTCGAGAAGAGGCATGGCT
CCGTAAAAGGCATCGAAGAGCGACCCAGTGTGATCTACAAATACGCATTG
GACCAGATGCCGCGAGAGCAGGTCCCCGAGCTCTACCGTGACTTCATCGG
CTTCGAGAAGAGGCATGGCTCCGTAAAAGGCATCGAAGAGGTGATTATCA
ACAATCGGAGGATGCAGTACGAGGAGCAAGCATCTGCATCACCGCTGGAC
TACGACAACTGGTTCGACTATCTCAGGCTGGAGGAGTCGACGGGAGACAT
CGACCGCACCAGAGAGGTGATTATCAACAATCGGAGGATGCAGTACGAGG
AGCAAGCATCTGCATCACCGCTGGACTACGACAACTGGTTCGACTATCTC
AGGCTGGAGGAGTCGACGGGAGACATCGACCGCACCAGAGAGGTGTACGA
ACGCGCCATCGCCAATGTTCCACCGGTGGCGGAGAAGCGGTACTGGCGCC
GCTACATCTATCTGTGGATAAACTACGCGCTGTTCGAGGAGTTGCAGGCC
GAAGATGTCCAGCGCACTCGGCGAGTGTACGAACGCGCCATCGCCAATGT
TCCACCGGTGGCGGAGAAGCGGTACTGGCGCCGCTACATCTATCTGTGGA
TAAACTACGCGCTGTTCGAGGAGTTGCAGGCCGAAGATGTCCAGCGCACT
CGGCGAGTATACCGAGCATGTCTGGACGTGGTACCCCACACGTCCTTCAC
GTTCGCCAAAGTGTGGCTCCTACTCGCCAAGTTCCACGTTCGCCACAAGG
ACCTCGGTGCTGCCCGGAAGATCCTGGGACAGGTATACCGAGCATGTCTG
GACGTGGTACCCCACACGTCCTTCACGTTCGCCAAAGTGTGGCTCCTACT
CGCCAAGTTCCACGTTCGCCACAAGGACCTCGGTGCTGCCCGGAAGATCC
TGGGACAGGCCTTGGGGATGTGTCCCAAGGAGAAGCTCTTCATCGGCTAC
GTCCAACTCGAGAGGGACCTGGGAGAGATCGACCGCTGTCGCAAGATATA
CAGGCACGGTTCTCGCCAAGGTGCCTTGGGGATGTGTCCCAAGGAGAAGC
TCTTCATCGGCTACGTCCAACTCGAGAGGGACCTGGGAGAGATCGACCGC
TGTCGCAAGATATACAGGCACGGTTCTCGCCAAGGTTTCTTGGAGGCGTT
TCCGAGTGACTGCGGCGCGTGGACAAAGTTCGCGACTCTGGAGGCTTCCG
TAGGAGAGAATGAGAGGGCGCGCGCCATTTTCGAGCTCGCTATCCGCCAG
CCTGTGCTCGACATGCCGGAGACGCTGTGGAAGGAGTATATCGATTTTGA
GTTCTTGGAGGCGTTTCCGAGTGACTGCGGCGCGTGGACAAAGTTCGCGA
CTCTGGAGGCTTCCGTAGGAGAGAATGAGAGGGCGCGCGCCATTTTCGAG
CTCGCTATCCGCCAGCCTGTGCTCGACATGCCGGAGACGCTGTGGAAGGA
GTATATCGATTTTGAGGCGGACAATGACGAGACACAGAGGGCGCGGGACC
TCTTCGAGAGGCTCTTGGAGCGAACGCAGCACGTAAAGGTGTGGATCACA
TACGCGCAGCACGAGGCAAGAACAGCGGGGGATCTGGATGCTGCGAGAGG
CGTTTTCGGTCGGGGGTACGAACACCTTCGCAAACAGGGGCTCAAGGAGG
AGAGGCGGACAATGACGAGACACAGAGGGCGCGGGACCTCTTCGAGAGGC
TCTTGGAGCGAACGCAGCACGTAAAGGTGTGGATCACATACGCGCAGCAC
GAGGCAAGAACAGCGGGGGATCTGGATGCTGCGAGAGGCGTTTTCGGTCG
GGGGTACGAACACCTTCGCAAACAGGGGCTCAAGGAGGAGAGGGTGAAGC
TCTTGGAGGCATGGAGAGCAGCGGAGAAGGCGGAAGGCAAGGGCAAGACG
ACGGGTCTCCAGGGTGAAGCTCTTGGAGGCATGGAGAGCAGCGGAGAAGG
CGGAAGGCAAGGGCAAGACGACGGGTCTCCAGGAGGTGGAAAGCAAGATG
CCGCGAAAGTTCAAGAAGAAGCGGATGATGACGGGGACGAACGGGGAGGG
CATGGGCTGGGAGGAATATTACGATTACCAATTCCCGGACGACGAATCAA
AGCCCGCCAACCTCAAGATCCTCGAGATGGCGCAGAAGTGGAAGCAAAGC
GGGGCGGGGGAGGCGGGCCTTGCGGGCATGAAGAATCTTTGGGGTGGAGG
CACCAAGCGCAAGCAGGGGGAGTTGGAGGGTAGCCCGAAAGCGTTGGCGG
CGAATGAGGAGGGAGACGACGAGGAGATATATTTGGATGACGAGGAGGAG
GTGGAAAGCAAGATGCCGCGAAAGTTCAAGAAGAAGCGGATGATGACGGG
GACGAACGGGGAGGGCATGGGCTGGGAGGAATATTACGATTACCAATTCC
CGGACGACGAATCAAAGCCCGCCAACCTCAAGATCCTCGAGATGGCGCAG
AAGTGGAAGCAAAGCGGGGCGGGGGAGGCGGGCCTTGCGGGCATGAAGAA
TCTTTGGGGTGGAGGCACCAAGCGCAAGCAGGGGGAGTTGGAGGGTAGCC
CGAAAGCGTTGGCGGCGAATGAGGAGGGAGACGACGAGGAGATATATTTG
GATGACGAGGAG
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