prot_H-elongata_contig17009.4343.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig17009.4343.1
Unique Nameprot_H-elongata_contig17009.4343.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length411
Homology
BLAST of mRNA_H-elongata_contig17009.4343.1 vs. uniprot
Match: D7FZ31_ECTSI (Viral A-type inclusion protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ31_ECTSI)

HSP 1 Score: 238 bits (606), Expect = 1.010e-65
Identity = 149/227 (65.64%), Postives = 173/227 (76.21%), Query Frame = 0
Query:    1 RAEAAEKSLAELRAKHSQVDQASHDFKRRERLVAEREGAARAWEASLRSEQLAAQQALSEAGDRIRETEERDALIKEREKALEARLQELETLKEEQRRVLKRAALHHQAQIKELDLEKKEVAANLQRSAASFLISRVASIPRRRLEDAWLTWRLRGLDVGSKVLREREAEARARAAELQESMARGLQELRVGKEGLEEEAARVQQIRDRAEADLRQVGRQHKEALAL 227
            RAEAAE+SL+ LR K S++D A HD  RRERLV EREGAARAWE+SLRSEQ +A+QALSEAG R++ +EER+A +KE E     RL     LK+ QR  LK  A  H A+ KELD   ++   +L+RSAASFL SR++S+PRRRLE AWL  RLRG+D  S+ LREREAEAR RA+ELQ SM RGLQELRVGKEGLEEEAARVQQ R R EADLRQV RQHKE L L
Sbjct:  895 RAEAAEESLSLLRVKLSEMDDAKHDVNRRERLVGEREGAARAWESSLRSEQASARQALSEAGARVKLSEEREASLKEAEXXXXXRLXXXXRLKQXQREALKEKAAEHNAKRKELDEAGRKAHQDLRRSAASFLFSRLSSLPRRRLEGAWLQLRLRGVDADSEALREREAEARGRASELQASMERGLQELRVGKEGLEEEAARVQQARVRVEADLRQVARQHKEVLHL 1121          
BLAST of mRNA_H-elongata_contig17009.4343.1 vs. uniprot
Match: A0A6H5KJI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJI0_9PHAE)

HSP 1 Score: 193 bits (491), Expect = 1.840e-50
Identity = 185/443 (41.76%), Postives = 223/443 (50.34%), Query Frame = 0
Query:    1 RAEAAEKSLAELRAKHSQVDQASHDFKRRERLVAEREGAARAWEASLR------------------------SEQLAAQQALSEAGDRIRETEERDALIKERE------KALEARLQELETLKEEQRRVLKRAALHHQAQIKELDLEKKEVAANLQRSAASFLISRVASIPRRRLEDAWLTWRLRGLDVGSKVLREREAEARARAAELQESMARGLQELRVGKEGLEEE---AARVQQIRDRAEADLRQVGRQHKEALALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELQEIGRRELDAGKAELKTATEGLEREKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFTSRVGAEKTALRQQRSELEDKEASVAVREENIRALNAEVIAN 410
            RAEAAE+SL+ LR K S++D A HD  RRERLV EREGAARAWE+SL                         +    A++ L +         E + +++  +      +ALE RL+ELE LK+EQR  LK  A  H A  KELD   ++   +L RSAASFL SR++S+PRRRLE AWL  RLRG+D GS+ LREREAEAR RA+ELQ SM RGLQELRVGKEGL      AARV     R EADLRQV RQHKE L L                                                XXXXXXXXXXXXXXXXX   ELQE GRRE+DAG+ EL+ A EGLE+EK                                            F++RVG              D+EA +  R+E++R L A+V  N
Sbjct:  868 RAEAAEESLSLLRVKLSEMDDAKHDVNRRERLVGEREGAARAWESSLXXXXXXXXXXXXXXXXXXXXXXXXXASLKVAEEGLLKTYWMSSTRNENNGVLRHHDWSGLKLQALEERLEELERLKQEQREALKEKAAEHDATRKELDEASRKAHQDLLRSAASFLFSRLSSLPRRRLEGAWLQLRLRGVDAGSEALREREAEARGRASELQASMERGLQELRVGKEGLXXXXXLAARV-----RVEADLRQVARQHKEVLHLKEKASRDLAEAESKRAALEEERKSLREEADKAEGLGQALAHEKAVVETXXXXXXXXXXXXXXXXXALEELQEAGRREVDAGREELRLAAEGLEKEKGDIKAAWKAFEDDRLKAEAALERSRNVLEGEKAEVQRARGDLDRFSARVGXXXXXXXXXXXXXXDREAELKTRQEDVRVLEAKVQQN 1305          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig17009.4343.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FZ31_ECTSI1.010e-6565.64Viral A-type inclusion protein n=1 Tax=Ectocarpus ... [more]
A0A6H5KJI0_9PHAE1.840e-5041.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 2..22
NoneNo IPR availableCOILSCoilCoilcoord: 161..181
NoneNo IPR availableCOILSCoilCoilcoord: 221..262
NoneNo IPR availableCOILSCoilCoilcoord: 309..332
NoneNo IPR availableCOILSCoilCoilcoord: 280..300
NoneNo IPR availableCOILSCoilCoilcoord: 75..106
NoneNo IPR availableCOILSCoilCoilcoord: 186..213
NoneNo IPR availableCOILSCoilCoilcoord: 379..406
NoneNo IPR availableCOILSCoilCoilcoord: 341..371

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig17009contigH-elongata_contig17009:1555..6317 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig17009.4343.1mRNA_H-elongata_contig17009.4343.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig17009 1555..6317 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig17009.4343.1 ID=prot_H-elongata_contig17009.4343.1|Name=mRNA_H-elongata_contig17009.4343.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=411bp
RAEAAEKSLAELRAKHSQVDQASHDFKRRERLVAEREGAARAWEASLRSE
QLAAQQALSEAGDRIRETEERDALIKEREKALEARLQELETLKEEQRRVL
KRAALHHQAQIKELDLEKKEVAANLQRSAASFLISRVASIPRRRLEDAWL
TWRLRGLDVGSKVLREREAEARARAAELQESMARGLQELRVGKEGLEEEA
ARVQQIRDRAEADLRQVGRQHKEALALKEKAAQDLSEAEDKRAVLEQERH
ALRTEADHAQALGQTIAREKARAENSHRLVSEETKELDKRRMALEELQEI
GRRELDAGKAELKTATEGLEREKESLKAARKAFEDGRLKAEAGLENSRNC
VERERSELQRARTDLDRFTSRVGAEKTALRQQRSELEDKEASVAVREENI
RALNAEVIAN*
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