mRNA_H-elongata_contig16995.4336.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig16995.4336.1 vs. uniprot
Match: D8LD67_ECTSI (EsV-1-166 n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD67_ECTSI) HSP 1 Score: 257 bits (657), Expect = 9.220e-81 Identity = 120/184 (65.22%), Postives = 139/184 (75.54%), Query Frame = 1
Query: 1 QQTADESSNRYGNANSYSPVLETYTEGSVMEVKIVVSTTHHGHLEFFLCDTDDLDD-PEGAVTQGCFNMHPLDRADDDGDASPIDPNYPGRYFLDPTCRSTETDQTILDGAFPGDVVTARYQLPSGVTCSRCIVQMAYYTGNSCMHPGYDDFNPTSWPSECAPNKEEWILTGLATCGDGGSYPE 549
+QTA E SN+YG NS PVLETY EG ++EVKIVVST H GH+E FLCD DDL D P+ VTQ CFN +PLDRA+DD PIDP GR+ LDP CR++ETDQ +L GAF GDV TAR+QLP GVTC RC+VQMAYYTGNSC H GY +FNP SWPS CAP+K +WI + CGDG +YPE
Sbjct: 105 EQTAAEGSNKYGQENSNYPVLETYAEGGILEVKIVVSTYHWGHVEMFLCDADDLPDGPDSVVTQSCFNEYPLDRAEDDEFNGPIDPLNRGRFILDPPCRASETDQELLPGAFAGDVATARFQLPQGVTCERCVVQMAYYTGNSCKHQGYAEFNPPSWPSSCAPSKADWINEAVGQCGDGDAYPE 288
BLAST of mRNA_H-elongata_contig16995.4336.1 vs. uniprot
Match: D7FP25_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP25_ECTSI) HSP 1 Score: 249 bits (637), Expect = 5.310e-79 Identity = 119/184 (64.67%), Postives = 138/184 (75.00%), Query Frame = 1
Query: 4 QTADESSNRYGNANSYSPVLETYTEGSVMEVKIVVSTTHHGHLEFFLCDTDDLDD-PEGAVTQGCFNMHPLDRADDDGDASPIDPNYPGRYFLDPTCRSTETDQTILDGAFPGDVVTARYQLPSGVTCSRCIVQMAYYTGNSCMHPGYDDFNPTSWPSECAPNKEEWILTGLAT-CGDGGSYPE 549
+TA E SNRYG NS PVLETY EG ++EVKIVV+T H GH+E FLCD DDL D P+ VTQ CFN +PLDRA+DD SPIDP GR+ LDP CR++ETDQ +L GAF GDV TAR+QLP GVTC RC+VQM YYTGNSC H GY +FNP SWPS CAP+K +WI + CGDG +YPE
Sbjct: 57 ETAAEGSNRYGQENSNYPVLETYAEGGILEVKIVVATYHWGHVEMFLCDADDLPDGPDSVVTQSCFNEYPLDRAEDDEFNSPIDPLNRGRFILDPPCRASETDQELLPGAFAGDVATARFQLPQGVTCERCVVQMVYYTGNSCKHQGYAEFNPPSWPSSCAPSKADWINEIVGQHCGDGDAYPE 240
BLAST of mRNA_H-elongata_contig16995.4336.1 vs. uniprot
Match: D8LM93_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM93_ECTSI) HSP 1 Score: 246 bits (629), Expect = 1.770e-78 Identity = 113/184 (61.41%), Postives = 137/184 (74.46%), Query Frame = 1
Query: 1 QQTADESSNRYGNANSYSPVLETYTEGSVMEVKIVVSTTHHGHLEFFLCDTDDLDD-PEGAVTQGCFNMHPLDRADDDGDASPIDPNYPGRYFLDPTCRSTETDQTILDGAFPGDVVTARYQLPSGVTCSRCIVQMAYYTGNSCMHPGYDDFNPTSWPSECAPNKEEWILTGLATCGDGGSYPE 549
+QTA ESSN+YG NS PV ETY EG ++EVKIVVST H GH+E FLC+ +L P+ VTQ CFN HPLDRADDD P DP+ GR+ LDP CR++ETDQ +LDGA+P DV TAR++LP G++C RC+VQM YYTGNSC H GY +FNP SWPS CAP+K +WI + CGDG +YPE
Sbjct: 108 EQTAAESSNKYGQENSNYPVRETYAEGGILEVKIVVSTYHWGHVEMFLCNAANLPGGPDSTVTQSCFNEHPLDRADDDEFNGPADPDNTGRFILDPPCRASETDQALLDGAYPSDVATARFKLPQGLSCERCVVQMVYYTGNSCKHQGYAEFNPPSWPSSCAPSKADWINEVVGQCGDGDAYPE 291
BLAST of mRNA_H-elongata_contig16995.4336.1 vs. uniprot
Match: D8LM92_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM92_ECTSI) HSP 1 Score: 256 bits (653), Expect = 4.970e-78 Identity = 118/184 (64.13%), Postives = 138/184 (75.00%), Query Frame = 1
Query: 1 QQTADESSNRYGNANSYSPVLETYTEGSVMEVKIVVSTTHHGHLEFFLCDTDDLDD-PEGAVTQGCFNMHPLDRADDDGDASPIDPNYPGRYFLDPTCRSTETDQTILDGAFPGDVVTARYQLPSGVTCSRCIVQMAYYTGNSCMHPGYDDFNPTSWPSECAPNKEEWILTGLATCGDGGSYPE 549
+QTA E SN+YG NS PVLETY EG ++E K+VVST H GH+E FLCD DDL P+ VTQ CFN HPLDR DDD SPIDP+ GR+ LDP CR++ETDQ +LDGAFPGDV TAR++LP G+TC RC+VQM YYTGNSC H GY +FNP SWPS CAP K +WI + CGDG +YPE
Sbjct: 107 EQTAAEDSNKYGLENSNYPVLETYAEGGILEFKMVVSTYHWGHVEMFLCDADDLPGGPDSTVTQSCFNEHPLDRVDDDDFNSPIDPSNTGRFILDPPCRASETDQEMLDGAFPGDVATARFKLPQGLTCERCVVQMVYYTGNSCKHQGYAEFNPESWPSSCAPTKADWINEVVGHCGDGDAYPE 290
BLAST of mRNA_H-elongata_contig16995.4336.1 vs. uniprot
Match: A0A6H5KD35_9PHAE (CBM1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD35_9PHAE) HSP 1 Score: 249 bits (636), Expect = 5.960e-78 Identity = 117/184 (63.59%), Postives = 137/184 (74.46%), Query Frame = 1
Query: 1 QQTADESSNRYGNANSYSPVLETYTEGSVMEVKIVVSTTHHGHLEFFLCDTDDLDD-PEGAVTQGCFNMHPLDRADDDGDASPIDPNYPGRYFLDPTCRSTETDQTILDGAFPGDVVTARYQLPSGVTCSRCIVQMAYYTGNSCMHPGYDDFNPTSWPSECAPNKEEWILTGLATCGDGGSYPE 549
+QTA E SN+YG NS PVLETY EG ++EVKIVVST H GH+E FLCD DDL D P+ VTQ CFN HPLDRA+DD PIDP GR+ LDP CR++ETDQ ++ GAFPGDV TAR+QLP GVTC RC+VQMAY+ NSC H GY +FNP SWP CAP+K +WI + CGDG +YPE
Sbjct: 76 EQTAAEGSNKYGQENSKYPVLETYAEGGILEVKIVVSTYHWGHVEMFLCDADDLPDGPDSVVTQSCFNEHPLDRAEDDEFNGPIDPLNRGRFILDPPCRASETDQELVPGAFPGDVATARFQLPQGVTCERCVVQMAYW--NSCKHQGYAEFNPPSWPGSCAPSKADWIKEAVGQCGDGDAYPE 257
BLAST of mRNA_H-elongata_contig16995.4336.1 vs. uniprot
Match: D8LMF4_ECTSI (EsV-1-166 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMF4_ECTSI) HSP 1 Score: 246 bits (627), Expect = 5.910e-76 Identity = 115/184 (62.50%), Postives = 136/184 (73.91%), Query Frame = 1
Query: 1 QQTADESSNRYGNANSYSPVLETYTEGSVMEVKIVVSTTHHGHLEFFLCDTDDLDDPEGA-VTQGCFNMHPLDRADDDGDASPIDPNYPGRYFLDPTCRSTETDQTILDGAFPGDVVTARYQLPSGVTCSRCIVQMAYYTGNSCMHPGYDDFNPTSWPSECAPNKEEWILTGLATCGDGGSYPE 549
+QTA E N+YG N PVL TY EG V+EVKI+VST H GH+E FLCDT DL + E + VTQ CFN +PLDRA DD PIDP Y GR+ LDP CR++ETDQ +++GA+PGDV TARYQLP GV C RC+VQM YYTGNSC H GY +FNP SWPS CAP+K +WI + CGDG +YPE
Sbjct: 112 EQTAAEGDNKYGRENYNYPVLGTYAEGGVLEVKILVSTYHWGHVEAFLCDTADLPEGEDSIVTQSCFNDYPLDRAIDDEFNGPIDPEYKGRFILDPPCRASETDQDLVEGAYPGDVATARYQLPEGVVCDRCVVQMVYYTGNSCKHEGYAEFNPESWPSSCAPSKADWINEVVGQCGDGDAYPE 295
BLAST of mRNA_H-elongata_contig16995.4336.1 vs. uniprot
Match: A0A6H5KTY6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTY6_9PHAE) HSP 1 Score: 251 bits (641), Expect = 5.610e-75 Identity = 117/184 (63.59%), Postives = 137/184 (74.46%), Query Frame = 1
Query: 1 QQTADESSNRYGNANSYSPVLETYTEGSVMEVKIVVSTTHHGHLEFFLCDTDDLDD-PEGAVTQGCFNMHPLDRADDDGDASPIDPNYPGRYFLDPTCRSTETDQTILDGAFPGDVVTARYQLPSGVTCSRCIVQMAYYTGNSCMHPGYDDFNPTSWPSECAPNKEEWILTGLATCGDGGSYPE 549
+QTA E SN YG NS PVLETY EG ++E K+VVST H GH+E FLCD +DL P+ VTQ CFN HPLDR DDD SPIDP+ GR+ LDP CR++ETDQ +LDGAFPGDV TAR++LP GV+C RC+VQM YYTGNSC H GY +FNP SWPS CAP K +WI + CGDG +YPE
Sbjct: 107 EQTAAEGSNLYGLENSNYPVLETYAEGGILEFKMVVSTYHWGHVEMFLCDANDLPGGPDSTVTQSCFNEHPLDRVDDDYFNSPIDPSNTGRFILDPPCRASETDQELLDGAFPGDVATARFKLPEGVSCERCVVQMVYYTGNSCKHQGYAEFNPDSWPSSCAPTKADWINELVGFCGDGDAYPE 290
BLAST of mRNA_H-elongata_contig16995.4336.1 vs. uniprot
Match: A0A6H5JI36_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JI36_9PHAE) HSP 1 Score: 241 bits (615), Expect = 2.490e-74 Identity = 121/254 (47.64%), Postives = 146/254 (57.48%), Query Frame = 1
Query: 1 QQTADESSNRYGNANSYSPVLETYTEGSVMEVKIVVSTTH-----------------------------------------------------------------------HGHLEFFLCDTDDLDDPEGAVTQGCFNMHPLDRADDDGDASPIDPNYPGRYFLDPTCRSTETDQTILDGAFPGDVVTARYQLPSGVTCSRCIVQMAYYTGNSCMHPGYDDFNPTSWPSECAPNKEEWILTGLATCGDGGSYPE 549
+QT E +N YG NS PV Y+EG ++E+KIVVST H GHLEFF+C+ +D+ DP+G VTQGCFNMHPLDRADDDGDASPIDP++ GRY+LDP CR+ ETDQ L GA+PGDV TARY+LPSG+TCSRCI+QM YYTGN+C HPGYD+F+P S P CAP KE+W+ T L CG+ G YPE
Sbjct: 102 EQTKAEGTNLYGQENSKYPVHGKYSEGGIIEIKIVVSTYHWVRELPELSAQGFICGIAYLAFLVLVAAFAVVVFVFVVEEGEWKSAPTLYAHRAYEAVPGKYRALDYVHGGSGHLEFFICNAEDMSDPDGVVTQGCFNMHPLDRADDDGDASPIDPDHIGRYYLDPPCRAGETDQDTLPGAYPGDVATARYKLPSGLTCSRCILQMVYYTGNACKHPGYDEFDPVSVPDGCAPTKEDWVQTQLGMCGEDGRYPE 355
BLAST of mRNA_H-elongata_contig16995.4336.1 vs. uniprot
Match: D7G4D7_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4D7_ECTSI) HSP 1 Score: 228 bits (582), Expect = 6.350e-71 Identity = 100/183 (54.64%), Postives = 129/183 (70.49%), Query Frame = 1
Query: 1 QQTADESSNRYGNANSYSPVLETYTEGSVMEVKIVVSTTHHGHLEFFLCDTDDLDDPEGAVTQGCFNMHPLDRADDDGDASPIDPNYPGRYFLDPTCRSTETDQTILDGAFPGDVVTARYQLPSGVTCSRCIVQMAYYTGNSCMHPGYDDFNPTSWPSECAPNKEEWILTGLATCGDGGSYPE 549
+Q +E +N Y N P+L TY EG V+E+K+ ++ H GH+EFF+C+ D+++DP+G Q CFN +PL RA+ D + SPIDPNYPGRY++DP CR ETDQT +GA G V+ A YQLP G+TC RCI+QM YYTGNSC H GY++F P SWPS CAP K +WI CG+ GSYPE
Sbjct: 84 EQNEEEGANFYSTPNGDWPILNTYQEGQVLEIKLGMTAYHWGHVEFFICNADEMEDPDGIANQECFNNYPLTRAEGDDENSPIDPNYPGRYYVDPKCREGETDQTKPEGAQDGYVIHASYQLPEGLTCDRCILQMNYYTGNSCKHVGYEEFEPASWPSACAPEKHDWIELDRYLCGENGSYPE 266
BLAST of mRNA_H-elongata_contig16995.4336.1 vs. uniprot
Match: D8LMS9_ECTSI (EsV-1-166 n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LMS9_ECTSI) HSP 1 Score: 226 bits (575), Expect = 1.020e-68 Identity = 104/183 (56.83%), Postives = 129/183 (70.49%), Query Frame = 1
Query: 1 QQTADESSNRYGNANSYSPVLETYTEGSVMEVKIVVSTTHHGHLEFFLCDTDDLDDPEGAVTQGCFNMHPLDRADDDGDASPIDPNYPGRYFLDPTCRSTETDQTILDGAFPGDVVTARYQLPSGVTCSRCIVQMAYYTGNSCMHPGYDDFNPTSWPSECAPNKEEWILTGLATCGDGGSYPE 549
+Q ADE +N Y AN L+++T G V+E+ IV++ H GH EFF+C+TDD+DDP+G TQ CFNMHPL RADDDGDASPIDPNYPGRY++DP CR ET+Q+ + G + RY LP + C CI+QM YYTGN+C H GY++FNPTSWPS CAPNK +WI CG G YPE
Sbjct: 113 EQNADEGTNVYSTANINWDPLDSFTSGQVLEMDIVMNAYHWGHCEFFVCNTDDMDDPDGVPTQECFNMHPLTRADDDGDASPIDPNYPGRYYVDPECREEETEQS--SNSIEGYNIKMRYVLPD-IECEHCILQMVYYTGNTCKHIGYEEFNPTSWPSSCAPNKWDWIELDRYVCGTRGQYPE 292 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig16995.4336.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig16995.4336.1 >prot_H-elongata_contig16995.4336.1 ID=prot_H-elongata_contig16995.4336.1|Name=mRNA_H-elongata_contig16995.4336.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=186bp QQTADESSNRYGNANSYSPVLETYTEGSVMEVKIVVSTTHHGHLEFFLCDback to top mRNA from alignment at H-elongata_contig16995:141..1694+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig16995.4336.1 ID=mRNA_H-elongata_contig16995.4336.1|Name=mRNA_H-elongata_contig16995.4336.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1554bp|location=Sequence derived from alignment at H-elongata_contig16995:141..1694+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig16995:141..1694+ >mRNA_H-elongata_contig16995.4336.1 ID=mRNA_H-elongata_contig16995.4336.1|Name=mRNA_H-elongata_contig16995.4336.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1116bp|location=Sequence derived from alignment at H-elongata_contig16995:141..1694+ (Himanthalia elongata Himel1 dioecious)back to top |