prot_H-elongata_contig16976.4330.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig16976.4330.1
Unique Nameprot_H-elongata_contig16976.4330.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length262
Homology
BLAST of mRNA_H-elongata_contig16976.4330.1 vs. uniprot
Match: D7FUU8_ECTSI (PCI domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUU8_ECTSI)

HSP 1 Score: 316 bits (809), Expect = 2.130e-106
Identity = 163/219 (74.43%), Postives = 190/219 (86.76%), Query Frame = 0
Query:   43 MPNVQALTGTPHEPHLRLLEVFAYGTYADAQAKLDELPKLSGFQAEKLRMLSIVTLAHTSKVVPYATIKAALGMDNVRHLEDIIFDTIYAGLLQGKLDQRQEVLKVKYAVARDVSLNDLGTIITKLGNWASTTQVLLTTLEGSVEEAAASRQREAHTAERLAVEAAEVKKNITENGGKQRDDDGYHDLGFDVDTDRSSVRRGRTKRNRAGMSDFRPRNK 261
            MPNVQAL GTPHEPHLRLLE FAYGTY DAQAK D+LPKL+G Q +KLRMLS+V+LAHTSK+VPYA +K ALG+DN+R LED+IFDT+YAGLLQGKLDQRQ VLKVKYA+ARDV +++L T+I KLG+WASTTQVLL TLEGSV +AA SR+ EA  AE LA EAAEVKKN +E+ GKQRDDDG+HD+GFD++     +RRGR+KRNRAGM DFRPRNK
Sbjct:    1 MPNVQALAGTPHEPHLRLLETFAYGTYTDAQAKADQLPKLTGAQVDKLRMLSVVSLAHTSKLVPYAAMKTALGIDNIRRLEDVIFDTMYAGLLQGKLDQRQAVLKVKYAMARDVRVDELTTMIDKLGSWASTTQVLLETLEGSVTQAAESRKSEAQIAESLAAEAAEVKKNFSESTGKQRDDDGFHDVGFDMEDRSGGMRRGRSKRNRAGM-DFRPRNK 218          
BLAST of mRNA_H-elongata_contig16976.4330.1 vs. uniprot
Match: A0A7S2CC19_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CC19_9STRA)

HSP 1 Score: 203 bits (517), Expect = 1.770e-61
Identity = 124/258 (48.06%), Postives = 162/258 (62.79%), Query Frame = 0
Query:    1 MSEEG--LVQFLVLAKTAKGAACVALIQQVLSHKKIFVFGELLAMPNVQALTGTPHEPHLRLLEVFAYGTYADAQAKLDELPKLSGFQAEKLRMLSIVTLAHTSKVVPYATIKAALGMDNVRHLEDIIFDTIYAGLLQGKLDQRQEVLKVKYAVARDVSLNDLGTIITKLGNWASTTQVLLTTLEGSVEEAAASRQREAHTAERLAVEAAEVKKNITENGGKQRDDDGYHDLGFDVDTDRSSVR-RGRTKRNRAGMSD 255
            M+E G  L QF +LAKTAK  A V LI+Q L+++KIFVFGELL M N+QAL  T H  +LRLLE+FAYGTY+   A+ D+ P ++  Q EKLR LSIV+LAHT K VPY  ++A L ++NVR LED+I DTIY GL+ GK+DQ   VLKVK AV RDV   D+  +I+KL +W      +L T+  S   AAA R   A     +A E  +VKKN+ +       + G    G ++D DR + R   R KR+R   +D
Sbjct:    2 MAEGGAALEQFCLLAKTAKSRAAVELIKQALTNRKIFVFGELLFMDNMQALRDTEHAEYLRLLELFAYGTYSQYLAQRDQYPDMNAAQTEKLRQLSIVSLAHTQKKVPYEVLQAELAINNVRELEDLIIDTIYTGLVTGKMDQTTGVLKVKSAVPRDVKPEDVDAMISKLTDWRDKCDAILKTMAASQAHAAAERDEHAKAKLAVAEEIDDVKKNLKDRLPTDLREGGSRYAGDEMDVDRPNRRLASRGKRSRVPYAD 259          
BLAST of mRNA_H-elongata_contig16976.4330.1 vs. uniprot
Match: A0A835YQX8_9STRA (PCI domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQX8_9STRA)

HSP 1 Score: 196 bits (497), Expect = 2.960e-59
Identity = 104/188 (55.32%), Postives = 134/188 (71.28%), Query Frame = 0
Query:    5 GLVQFLVLAKTAKGAACVALIQQVLSHKKIFVFGELLAMPNVQALTGTPHEPHLRLLEVFAYGTYADAQAKLDELPKLSGFQAEKLRMLSIVTLAHTSKVVPYATIKAALGMDNVRHLEDIIFDTIYAGLLQGKLDQRQEVLKVKYAVARDVSLNDLGTIITKLGNWASTTQVLLTTLEGSVEEAAAS 192
            GL Q+ +LAKTAKG ACVALIQ+V++ KKIFVFGELLAMPNVQ L GT HEP+LRLLE+FAYG Y D +A    LP+LS    EKLRML++V LA+TS+VVPY  ++ ALG+ +VR +ED++ D +YAGLLQ +LDQR   L+V++   RDV   ++ ++I  L  WA  T   L  L   V  A A+
Sbjct:    9 GLEQYCLLAKTAKGRACVALIQKVMADKKIFVFGELLAMPNVQGLRGTEHEPYLRLLELFAYGVYGDHKAAGGALPQLSDAMTEKLRMLTVVALANTSRVVPYGKLQEALGVSSVRVVEDVVLDAMYAGLLQCRLDQRAGTLRVQHVTPRDVRPEEIDSMIATLDMWAGATDRALRGLRKGVNSAKAA 196          
BLAST of mRNA_H-elongata_contig16976.4330.1 vs. uniprot
Match: A0A7S2RP08_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RP08_9STRA)

HSP 1 Score: 194 bits (492), Expect = 1.700e-57
Identity = 116/244 (47.54%), Postives = 152/244 (62.30%), Query Frame = 0
Query:    8 QFLVLAKTAKGAACVALIQQVLSHKKIFVFGELLAMPNVQALTGTPHEPHLRLLEVFAYGTYADAQAKLDELPKLSGFQAEKLRMLSIVTLAHTSKVVPYATIKAALGMDNVRHLEDIIFDTIYAGLLQGKLDQRQEVLKVKYAVARDVSLNDLGTIITKLGNWASTTQVLLTTLEGSVEEAAASRQREAHTAERLAVEAAEVKKNITENGGKQRDDDGYHDLGFDVDTDRSSVRRG-RTKRNR 250
            +F +LAK+ +G A VALI+Q LS KK+FV GELLAM N+QAL GT  E HLRLLE+FAYGTY++ QA  D+LP+L+    EKLR LSIV+LAHT K V Y  ++  L + NVR LED+I DTIYAGL+ GKLDQ   +L V+ AVARDV   ++G +I KL  W S  + L+  L+ ++     +RQ E    + +  +  E  K +         D   H  G + D    S+RRG  TKR R
Sbjct:   29 RFCLLAKSQRGRAVVALIEQALSSKKVFVVGELLAMDNIQALRGTEFEAHLRLLELFAYGTYSEYQAAKDQLPELNSNMKEKLRALSIVSLAHTKKQVTYTELQQELAITNVRELEDLIIDTIYAGLVDGKLDQANGMLNVRSAVARDVRPEEVGEMIQKLTQWGSDMEQLIAALDKNMAHVNEARQGETKLRQEVRAKVEETTKKLK--------DKSLHGSGDEEDERERSMRRGAHTKRMR 264          
BLAST of mRNA_H-elongata_contig16976.4330.1 vs. uniprot
Match: F0YEG3_AURAN (PCI domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YEG3_AURAN)

HSP 1 Score: 188 bits (478), Expect = 2.060e-56
Identity = 107/198 (54.04%), Postives = 134/198 (67.68%), Query Frame = 0
Query:    1 MSEEG---LVQFLVLAKTAKGAACVALIQQVLSHKKIFVFGELLAMPNVQALTGTPHEPHLRLLEVFAYGTYADAQAKLDELPKLSGFQAEKLRMLSIVTLAHTSKVVPYATIKAALGMDNVRHLEDIIFDTIYAGLLQGKLDQRQEVLKVKYAVARDVSLNDLGTIITKLGNWASTTQVLLTTLEGSVEEAAASRQR 195
            M+E+G   L QF +LAK+AKG A V +IQQ LS K+I+VFGELLAMP+VQAL GT H PHL LLE+FA+GTY D +AK D +P L+  Q  KLR LS+V+LA  S VV YAT++  L +DNVR LED I +TIYAGLL GK+DQ     +V  A  RDV L+ +G +  KL  WA+T   L   LE +   A A R +
Sbjct:    1 MAEDGSQALEQFCLLAKSAKGRAVVGIIQQTLSSKRIYVFGELLAMPSVQALRGTEHAPHLDLLEIFAFGTYGDYRAKGDAMPPLTPAQLTKLRQLSLVSLARESAVVAYATMQEELAVDNVRDLEDAIIETIYAGLLSGKMDQMSAEFRVAKAAGRDVKLDAVGDLAAKLEAWAATAGQLSAELEENKASAKAMRDQ 198          
BLAST of mRNA_H-elongata_contig16976.4330.1 vs. uniprot
Match: A0A7R9UCJ6_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UCJ6_9STRA)

HSP 1 Score: 189 bits (480), Expect = 6.410e-56
Identity = 101/180 (56.11%), Postives = 126/180 (70.00%), Query Frame = 0
Query:    4 EGLVQFLVLAKTAKGAACVALIQQVLSHKKIFVFGELLAMPNVQALTGTPHEPHLRLLEVFAYGTYADAQAKLDELPKLSGFQAEKLRMLSIVTLAHTSKVVPYATIKAALGMDNVRHLEDIIFDTIYAGLLQGKLDQRQEVLKVKYAVARDVSLNDLGTIITKLGNWASTTQVLLTTLE 183
            + L QF+ LAKTAKGAACVALIQQVL+H K+FVFGELL MPNVQAL GT H+P+LRLLE+FAYGT ADAQ   + LP +S  Q  KLR LSI++ A T   + Y  +  AL +DNVR LED++ D IYA L+  KL+QR+ V+++   VARDV  +DL  I  KL  W   T  +L  L+
Sbjct:   21 DALEQFVSLAKTAKGAACVALIQQVLNHPKVFVFGELLLMPNVQALRGTEHQPYLRLLELFAYGTMADAQGAKEALPTMSEAQEAKLRKLSILSAAQTQGTLDYDQLMPALQVDNVRDLEDVVIDAIYADLIDAKLNQRERVVRIHRCVARDVRSDDLSAIKEKLKAWNRNTSEVLQALK 200          
BLAST of mRNA_H-elongata_contig16976.4330.1 vs. uniprot
Match: A0A4D9D7R0_9STRA (PCI domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D7R0_9STRA)

HSP 1 Score: 186 bits (472), Expect = 1.540e-54
Identity = 99/184 (53.80%), Postives = 133/184 (72.28%), Query Frame = 0
Query:    6 LVQFLVLAKTAKGAACVALIQQVLSHKKIFVFGELLAMPNVQALTGTPHEPHLRLLEVFAYGTYADAQAKLDELPKLSGFQAEKLRMLSIVTLAHTSKVVPYATIKAALGMD-NVRHLEDIIFDTIYAGLLQGKLDQRQEVLKVKYAVARDVSLNDLGTIITKLGNWASTTQVLLTTLEGSVEE 188
            L QF +LAK+AKG ACVALIQQVLS +KI VFGELLAMPN++AL G+ HEP+LRLLE+FAYGTYAD Q +   LP L+  Q  KL+ L++VTLA   + +PYA +   L +D +VR LED+I ++IY G+L G+LDQR  + ++K A+ RDV L D+  ++ KL  W +  + LLT+LE  + E
Sbjct:   10 LEQFTILAKSAKGNACVALIQQVLSTRKIVVFGELLAMPNLEALRGSEHEPYLRLLEIFAYGTYADYQRQRGTLPPLTPPQLRKLQQLTLVTLAQKHESIPYAVLFRELDIDGDVRELEDLIIESIYMGVLTGRLDQRGGLFRIKGAIGRDVRLEDIDGMMDKLQKWVANAETLLTSLEQRMSE 193          
BLAST of mRNA_H-elongata_contig16976.4330.1 vs. uniprot
Match: A0A7S2UVG8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVG8_9STRA)

HSP 1 Score: 183 bits (464), Expect = 3.020e-54
Identity = 99/189 (52.38%), Postives = 130/189 (68.78%), Query Frame = 0
Query:    6 LVQFLVLAKTAKGAACVALIQQVLSHKKIFVFGELLAMPNVQALTGTPHEPHLRLLEVFAYGTYADAQAKLDELPKLSGFQAEKLRMLSIVTLAHTSKVVPYATIKAALGMDNVRHLEDIIFDTIYAGLLQGKLDQRQEVLKVKYAVARDVSLNDLGTIITKLGNWASTTQVLLTTLEGSVEEAAASRQ 194
            L +F++LAK AKG ACVALIQQVL++ ++FVFGELLA PNVQAL GT HE HLRLLE+FAYGTY+D       LP+L+  Q  KLR LS+V+LA  SKV+ Y  +   L ++NVR LED++ +TIY GL+ GKLDQ   VLKV    ARDV  +++  ++ +L +W+  TQ L+  L    E   + RQ
Sbjct:   11 LERFVILAKNAKGRACVALIQQVLNNNRVFVFGELLASPNVQALAGTEHELHLRLLELFAYGTYSDYHENRSSLPELTPAQRTKLRQLSLVSLASASKVLRYEELMKELQLENVRELEDLVIETIYVGLVLGKLDQLGGVLKVSAVGARDVRPSEVPHLLHRLQHWSQVTQALVQELGTCAETVVSKRQ 199          
BLAST of mRNA_H-elongata_contig16976.4330.1 vs. uniprot
Match: V9EG37_PHYPR (PCI domain-containing protein n=12 Tax=Phytophthora TaxID=4783 RepID=V9EG37_PHYPR)

HSP 1 Score: 182 bits (463), Expect = 2.300e-53
Identity = 94/167 (56.29%), Postives = 118/167 (70.66%), Query Frame = 0
Query:    5 GLVQFLVLAKTAKGAACVALIQQVLSHKKIFVFGELLAMPNVQALTGTPHEPHLRLLEVFAYGTYADAQAKLDELPKLSGFQAEKLRMLSIVTLAHTSKVVPYATIKAALGMDNVRHLEDIIFDTIYAGLLQGKLDQRQEVLKVKYAVARDVSLNDLGTIITKLGNW 171
            GL QF +LAK A+G ACVALIQQVLS+KK+FVF ELL MPNV+AL  + H  H  LL +F++GTY D  A+ DELP L+  Q  KLR L++V+LAH  K +PY T+   LG+  VR +EDI+ DTIY+GL+QGKLDQ+     VKYAV RD    D+  +I KL NW
Sbjct:   10 GLEQFTLLAKNARGRACVALIQQVLSNKKLFVFRELLDMPNVEALKDSEHMEHYELLRIFSFGTYNDYLARKDELPDLTPQQMNKLRKLTVVSLAHRFKNIPYDTLIQDLGVSTVREVEDILIDTIYSGLVQGKLDQKSRCFVVKYAVGRDTRHEDIDDMIQKLSNW 176          
BLAST of mRNA_H-elongata_contig16976.4330.1 vs. uniprot
Match: A0A3F2RJW9_9STRA (PCI domain-containing protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RJW9_9STRA)

HSP 1 Score: 178 bits (451), Expect = 1.340e-51
Identity = 105/223 (47.09%), Postives = 145/223 (65.02%), Query Frame = 0
Query:    6 LVQFLVLAKTAKGAACVALIQQVLSHKKIFVFGELLAMPNVQALTGTPHEPHLRLLEVFAYGTYADAQAKLDELPKLSGFQAEKLRMLSIVTLAHTSKVVPYATIKAALGMDNVRHLEDIIFDTIYAGLLQGKLDQRQEVLKVKYAVARDVSLNDLGTIITKLGNW-ASTTQV---LLTTLEGSVEEAAASRQREAHTAERLAVEAAEVKKNITENGGKQRDD 224
            L QF +LAK A+G ACVALIQQVLS+KK+FVF ELL MPNV+AL  + +  H  LL +F +GTY++  A  +ELP+L+  Q  KLR L+ V+LAH  K +PY T+   LG+ +VR +EDI+ DTIY+GLLQGKLDQ+     VKYAV RD    D+ ++I KL NW A +T++   + T L  + +     R RE     ++A  A+E +K+   +G   R+D
Sbjct:   11 LEQFTLLAKNARGRACVALIQQVLSNKKLFVFRELLDMPNVEALKDSEYSGHYELLRIFCFGTYSEYAAHKEELPELTPQQVNKLRKLTAVSLAHRYKNIPYNTLMQDLGVSSVREVEDILIDTIYSGLLQGKLDQKSSCFAVKYAVGRDTHHADIDSMIEKLTNWKAKSTEINEKINTILRMAEKREEDERVREESIRNKMAARASE-RKSSAGSGPNFRED 232          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig16976.4330.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FUU8_ECTSI2.130e-10674.43PCI domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A7S2CC19_9STRA1.770e-6148.06Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A835YQX8_9STRA2.960e-5955.32PCI domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A7S2RP08_9STRA1.700e-5747.54Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
F0YEG3_AURAN2.060e-5654.04PCI domain-containing protein n=1 Tax=Aureococcus ... [more]
A0A7R9UCJ6_9STRA6.410e-5656.11Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A4D9D7R0_9STRA1.540e-5453.80PCI domain-containing protein n=2 Tax=Monodopsidac... [more]
A0A7S2UVG8_9STRA3.020e-5452.38Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
V9EG37_PHYPR2.300e-5356.29PCI domain-containing protein n=12 Tax=Phytophthor... [more]
A0A3F2RJW9_9STRA1.340e-5147.09PCI domain-containing protein n=4 Tax=Phytophthora... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00753PINTcoord: 81..171
e-value: 5.6E-8
score: 42.5
NoneNo IPR availableGENE3D1.25.40.570coord: 1..163
e-value: 1.1E-54
score: 186.5
NoneNo IPR availablePANTHERPTHR15350COP9 SIGNALOSOME COMPLEX SUBUNIT 7/DENDRITIC CELL PROTEIN GA17coord: 4..224
NoneNo IPR availablePANTHERPTHR15350:SF5COP9 SIGNALOSOME COMPLEX SUBUNIT 7coord: 4..224
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..13
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..18
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..261
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
IPR000717Proteasome component (PCI) domainSMARTSM00088PINT_4coord: 81..171
e-value: 5.6E-8
score: 42.5
IPR000717Proteasome component (PCI) domainPROSITEPS50250PCIcoord: 1..153
score: 18.352

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig16976contigH-elongata_contig16976:1535..6165 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig16976.4330.1mRNA_H-elongata_contig16976.4330.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig16976 1535..6165 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig16976.4330.1 ID=prot_H-elongata_contig16976.4330.1|Name=mRNA_H-elongata_contig16976.4330.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=262bp
MSEEGLVQFLVLAKTAKGAACVALIQQVLSHKKIFVFGELLAMPNVQALT
GTPHEPHLRLLEVFAYGTYADAQAKLDELPKLSGFQAEKLRMLSIVTLAH
TSKVVPYATIKAALGMDNVRHLEDIIFDTIYAGLLQGKLDQRQEVLKVKY
AVARDVSLNDLGTIITKLGNWASTTQVLLTTLEGSVEEAAASRQREAHTA
ERLAVEAAEVKKNITENGGKQRDDDGYHDLGFDVDTDRSSVRRGRTKRNR
AGMSDFRPRNK*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000717PCI_dom