mRNA_H-elongata_contig169758.4329.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig169758.4329.1 vs. uniprot
Match: D8LGJ4_ECTSI (Phospholipid-transporting ATPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGJ4_ECTSI) HSP 1 Score: 217 bits (552), Expect = 5.060e-63 Identity = 108/122 (88.52%), Postives = 116/122 (95.08%), Query Frame = 1
Query: 1 HVLGDPEAERMLLTLGSMCKSVVACRVSPAQKRLIVRLVKRGVVPTPVTLAIGDGANDVGMIQEAQIGVGISGKEGRQAVNNADFAIAQFRFLKRLMLVHGHWDYRRLCKVLGSGYWVYCVL 366
HVLG+PEAERMLLTLGSMCKSV+ACRVSPAQKRLIVRLVKRGVVPTPVTL+IGDGANDVGMIQEAQIGVGISGKEGRQAVNN+DFAIAQFRFLKRLMLVHGHWDYRR+CKV+ ++ VL
Sbjct: 856 HVLGNPEAERMLLTLGSMCKSVIACRVSPAQKRLIVRLVKRGVVPTPVTLSIGDGANDVGMIQEAQIGVGISGKEGRQAVNNSDFAIAQFRFLKRLMLVHGHWDYRRVCKVILYSFYKNFVL 977
BLAST of mRNA_H-elongata_contig169758.4329.1 vs. uniprot
Match: A0A836CHZ9_9STRA (Phospholipid-transporting ATPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHZ9_9STRA) HSP 1 Score: 185 bits (469), Expect = 7.710e-52 Identity = 87/112 (77.68%), Postives = 101/112 (90.18%), Query Frame = 1
Query: 1 HVLGDPEAERMLLTLGSMCKSVVACRVSPAQKRLIVRLVKRGVVPTPVTLAIGDGANDVGMIQEAQIGVGISGKEGRQAVNNADFAIAQFRFLKRLMLVHGHWDYRRLCKVL 336
H+LG + + + L + MC+SVVACRVSPAQKRL+VRLVK+ V P P+TLAIGDGANDVGMIQEAQ+GVG+SGKEGRQAVNNADFAIAQFRFL+RL+LVHGHWDYRRLCKV+
Sbjct: 953 HILGHDDKQALFLRVACMCRSVVACRVSPAQKRLLVRLVKKNVRPAPITLAIGDGANDVGMIQEAQVGVGMSGKEGRQAVNNADFAIAQFRFLRRLLLVHGHWDYRRLCKVI 1064
BLAST of mRNA_H-elongata_contig169758.4329.1 vs. uniprot
Match: W7TGI1_9STRA (Phospholipid-transporting ATPase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TGI1_9STRA) HSP 1 Score: 180 bits (456), Expect = 4.310e-50 Identity = 89/122 (72.95%), Postives = 105/122 (86.07%), Query Frame = 1
Query: 1 HVLGDPEAERMLLTLGSMCKSVVACRVSPAQKRLIVRLVKRGVVPTPVTLAIGDGANDVGMIQEAQIGVGISGKEGRQAVNNADFAIAQFRFLKRLMLVHGHWDYRRLCKVLGSGYWVYCVL 366
HVLGDPE E M L L S+C+SVVACRVSPAQKRL+VRLVK GV P P+TL+IGDGANDV MIQEAQIGVGISGKEG+QAVN+ADFAIAQFR+L+RL+L+HG +DYRR+ KV+ ++ VL
Sbjct: 833 HVLGDPEYEAMFLRLSSICRSVVACRVSPAQKRLVVRLVKAGVKPMPITLSIGDGANDVAMIQEAQIGVGISGKEGQQAVNSADFAIAQFRYLRRLLLIHGRYDYRRMSKVILYSFYKNMVL 954
BLAST of mRNA_H-elongata_contig169758.4329.1 vs. uniprot
Match: A0A7S4D8B9_HETAK (Phospholipid-transporting ATPase (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D8B9_HETAK) HSP 1 Score: 172 bits (437), Expect = 2.000e-48 Identity = 83/122 (68.03%), Postives = 99/122 (81.15%), Query Frame = 1
Query: 1 HVLGDPEAERMLLTLGSMCKSVVACRVSPAQKRLIVRLVKRGVVPTPVTLAIGDGANDVGMIQEAQIGVGISGKEGRQAVNNADFAIAQFRFLKRLMLVHGHWDYRRLCKVLGSGYWVYCVL 366
H++G E ER L + +C+SV+ACRVSP QKRL+VRLVK GV P+TLA+GDGANDVGMIQEAQ+GVGISGKEGRQAVN ADFAIAQFRFL+RL+ +HG WDYRR CKV+ ++ VL
Sbjct: 173 HIMGRAELERKFLRVARLCRSVIACRVSPEQKRLLVRLVKLGVEGAPITLAVGDGANDVGMIQEAQVGVGISGKEGRQAVNTADFAIAQFRFLRRLLFLHGRWDYRRTCKVVLYSFYKNMVL 294
BLAST of mRNA_H-elongata_contig169758.4329.1 vs. uniprot
Match: A0A7S3XT36_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XT36_HETAK) HSP 1 Score: 160 bits (406), Expect = 2.890e-48 Identity = 77/109 (70.64%), Postives = 92/109 (84.40%), Query Frame = 1
Query: 1 HVLGDPEAERMLLTLGSMCKSVVACRVSPAQKRLIVRLVKRGVVPTPVTLAIGDGANDVGMIQEAQIGVGISGKEGRQAVNNADFAIAQFRFLKRLMLVHGHWDYRRLC 327
HVLGD E ML + S+C +V+ACRVSP QK L+V +VK+ + PTPVTLAIGDGANDV MIQEAQ+GVGISG EG+QAVN++DFAIAQFR+LK L+LVHG W+YRRLC
Sbjct: 10 HVLGDDALEWMLFQVASLCNTVIACRVSPKQKALLVGMVKKYISPTPVTLAIGDGANDVNMIQEAQVGVGISGNEGQQAVNSSDFAIAQFRYLKPLLLVHGRWNYRRLC 118
BLAST of mRNA_H-elongata_contig169758.4329.1 vs. uniprot
Match: A0A7S1ZM93_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZM93_TRICV) HSP 1 Score: 164 bits (414), Expect = 2.710e-45 Identity = 79/122 (64.75%), Postives = 98/122 (80.33%), Query Frame = 1
Query: 1 HVLGDPEAERMLLTLGSMCKSVVACRVSPAQKRLIVRLVKRGVVPTPVTLAIGDGANDVGMIQEAQIGVGISGKEGRQAVNNADFAIAQFRFLKRLMLVHGHWDYRRLCKVLGSGYWVYCVL 366
H LGDP+ E ML + S C SV+ACRVSP QK L+VR+V++ V PTPVTLAIGDGANDVGMIQEA +GVGISG EG+QAVN +DFAIAQFRFL+ L+L+HG W++ R+CKV+ ++ VL
Sbjct: 233 HFLGDPQYEEMLFAVASSCDSVIACRVSPKQKALMVRMVRKYVEPTPVTLAIGDGANDVGMIQEAHVGVGISGLEGQQAVNASDFAIAQFRFLRELLLIHGRWNFIRMCKVVLFSFYKNAVL 354
BLAST of mRNA_H-elongata_contig169758.4329.1 vs. uniprot
Match: A0A7S2CMU9_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CMU9_9STRA) HSP 1 Score: 162 bits (409), Expect = 3.470e-45 Identity = 81/122 (66.39%), Postives = 98/122 (80.33%), Query Frame = 1
Query: 1 HVLGDPEAERMLLTLGSMCKSVVACRVSPAQKRLIVRLVKRGVVPTPVTLAIGDGANDVGMIQEAQIGVGISGKEGRQAVNNADFAIAQFRFLKRLMLVHGHWDYRRLCKVLGSGYWVYCVL 366
++ D EA LL LG CK+V+ACRVSPAQK+LIV++VK G+ P+TL+IGDGANDV MIQEAQIGVGISGKEGRQAVN++DFAIAQFRFLKRL+LVHG W+Y R KV+ ++ VL
Sbjct: 48 EIMDDEEARHQLLQLGCFCKAVLACRVSPAQKQLIVKMVKDGLPTKPITLSIGDGANDVPMIQEAQIGVGISGKEGRQAVNSSDFAIAQFRFLKRLLLVHGRWNYLRTAKVIIYSFYKNTVL 169
BLAST of mRNA_H-elongata_contig169758.4329.1 vs. uniprot
Match: A0A7R9ZF58_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9ZF58_9STRA) HSP 1 Score: 164 bits (414), Expect = 2.000e-44 Identity = 78/111 (70.27%), Postives = 94/111 (84.68%), Query Frame = 1
Query: 1 HVLGDPEAERMLLTLGSMCKSVVACRVSPAQKRLIVRLVKRGVVPTPVTLAIGDGANDVGMIQEAQIGVGISGKEGRQAVNNADFAIAQFRFLKRLMLVHGHWDYRRLCKV 333
H+LGDP+ E ML + S C SV+ACRVSP QK L+VRLV++ V+PTPVTLAIGDGANDVGMIQEA +G+GISG EG+QAVN +DFAIAQFRFL+ L+L+HG W+Y RL KV
Sbjct: 1419 HLLGDPKLEEMLFAVASACDSVIACRVSPKQKALLVRLVRKYVLPTPVTLAIGDGANDVGMIQEAHVGIGISGLEGQQAVNASDFAIAQFRFLRDLLLIHGRWNYSRLAKV 1529
BLAST of mRNA_H-elongata_contig169758.4329.1 vs. uniprot
Match: W7TQX5_9STRA (Phospholipid-transporting ATPase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TQX5_9STRA) HSP 1 Score: 162 bits (411), Expect = 5.040e-44 Identity = 81/123 (65.85%), Postives = 100/123 (81.30%), Query Frame = 1
Query: 1 HVLGDPEAERMLLTLGSMCKSVVACRVSPAQKRLIVRLVKRGVV-PTPVTLAIGDGANDVGMIQEAQIGVGISGKEGRQAVNNADFAIAQFRFLKRLMLVHGHWDYRRLCKVLGSGYWVYCVL 366
+ GD E ER+LL + +CKSVVACRVSPAQKR+++RLVK+GV P P+TLAIGDGANDV MIQEAQ+GVGISG+EGRQAVN+ADFAI+QFRF++ L+L HG W YRR KV+ ++ VL
Sbjct: 1043 RIFGDWEMERLLLRVARLCKSVVACRVSPAQKRMLIRLVKKGVKHPKPITLAIGDGANDVAMIQEAQVGVGISGREGRQAVNSADFAISQFRFIEPLLLKHGRWSYRRTSKVILYSFYKNIVL 1165
BLAST of mRNA_H-elongata_contig169758.4329.1 vs. uniprot
Match: A0A7S1C2W0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C2W0_9STRA) HSP 1 Score: 152 bits (385), Expect = 5.670e-44 Identity = 76/117 (64.96%), Postives = 93/117 (79.49%), Query Frame = 1
Query: 1 HVLGDPEAERMLLTLGSMCKSVVACRVSPAQKRLIVRLVK-----RGVVPTPVTLAIGDGANDVGMIQEAQIGVGISGKEGRQAVNNADFAIAQFRFLKRLMLVHGHWDYRRLCKVL 336
H+LGDPE+E L+ + +CKSV+ACRVSP QK +V LV+ R P+ LAIGDGANDVGMIQ+AQ+GVGISGKEG QAVN++DFAIAQFRFL+RL+LVHG W YRR+ KV+
Sbjct: 46 HILGDPESEHALMVVAQLCKSVIACRVSPKQKADLVDLVRHRSPGRSGKNKPMCLAIGDGANDVGMIQQAQVGVGISGKEGLQAVNSSDFAIAQFRFLRRLLLVHGRWSYRRMSKVV 162 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig169758.4329.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig169758.4329.1 >prot_H-elongata_contig169758.4329.1 ID=prot_H-elongata_contig169758.4329.1|Name=mRNA_H-elongata_contig169758.4329.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=112bp MLLTLGSMCKSVVACRVSPAQKRLIVRLVKRGVVPTPVTLAIGDGANDVGback to top mRNA from alignment at H-elongata_contig169758:454..1243- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig169758.4329.1 ID=mRNA_H-elongata_contig169758.4329.1|Name=mRNA_H-elongata_contig169758.4329.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=790bp|location=Sequence derived from alignment at H-elongata_contig169758:454..1243- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig169758:454..1243- >mRNA_H-elongata_contig169758.4329.1 ID=mRNA_H-elongata_contig169758.4329.1|Name=mRNA_H-elongata_contig169758.4329.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=672bp|location=Sequence derived from alignment at H-elongata_contig169758:454..1243- (Himanthalia elongata Himel1 dioecious)back to top |