prot_H-elongata_contig169530.4312.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig169530.4312.1
Unique Nameprot_H-elongata_contig169530.4312.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length85
Homology
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BLAST of mRNA_H-elongata_contig169530.4312.1 vs. uniprot
Match: D8LGQ4_ECTSI (ATP-dependent Clp protease proteolytic subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGQ4_ECTSI)

HSP 1 Score: 169 bits (427), Expect = 1.870e-50
Identity = 83/85 (97.65%), Postives = 84/85 (98.82%), Query Frame = 0 
Query:    1 QYVPCDVSTVCFGTAASMGAFLLGAGAKGKRRSLPNARIMIHQPLGGAQGQAADIEIQAKEILFIRSLLNSYMAEYCEQPIDKIQ 85
            QYVPCDVSTVCFGTAASMGAFLLGAGAKGKRRSLPNARIMIHQPLGGAQGQAADIEIQAKEILFIRSLLNSYMAEYC+QP DKIQ
Sbjct:  165 QYVPCDVSTVCFGTAASMGAFLLGAGAKGKRRSLPNARIMIHQPLGGAQGQAADIEIQAKEILFIRSLLNSYMAEYCDQPADKIQ 249
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BLAST of mRNA_H-elongata_contig169530.4312.1 vs. uniprot
Match: A0A7S0G7S0_9STRA (ATP-dependent Clp protease proteolytic subunit (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0G7S0_9STRA)

HSP 1 Score: 159 bits (401), Expect = 1.180e-47
Identity = 76/85 (89.41%), Postives = 82/85 (96.47%), Query Frame = 0 
Query:    1 QYVPCDVSTVCFGTAASMGAFLLGAGAKGKRRSLPNARIMIHQPLGGAQGQAADIEIQAKEILFIRSLLNSYMAEYCEQPIDKIQ 85
            QYVPCDVSTVCFG AASMGAFLLGAGAKGKRRSLPNAR+MIHQPLGGAQGQAADIEIQAKEILFIR +LN+Y+AEYC+QP DKI+
Sbjct:   79 QYVPCDVSTVCFGMAASMGAFLLGAGAKGKRRSLPNARVMIHQPLGGAQGQAADIEIQAKEILFIREVLNTYIAEYCDQPKDKIE 163
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BLAST of mRNA_H-elongata_contig169530.4312.1 vs. uniprot
Match: A0A835YSZ8_9STRA (ATP-dependent Clp protease proteolytic subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSZ8_9STRA)

HSP 1 Score: 161 bits (407), Expect = 1.840e-47
Identity = 80/85 (94.12%), Postives = 83/85 (97.65%), Query Frame = 0 
Query:    1 QYVPCDVSTVCFGTAASMGAFLLGAGAKGKRRSLPNARIMIHQPLGGAQGQAADIEIQAKEILFIRSLLNSYMAEYCEQPIDKIQ 85
            QYVPCDVSTVCFGTAASMGAFLLGAGAKGKRRSLPNARIMIHQPLGGAQGQAADIEIQAKEILFIRSLLNSY+A+Y  QPI+KIQ
Sbjct:  163 QYVPCDVSTVCFGTAASMGAFLLGAGAKGKRRSLPNARIMIHQPLGGAQGQAADIEIQAKEILFIRSLLNSYIADYTGQPIEKIQ 247
[Close]
BLAST of mRNA_H-elongata_contig169530.4312.1 vs. uniprot
Match: B8CGM1_THAPS (ATP-dependent Clp protease proteolytic subunit n=3 Tax=Bacillariophyta TaxID=2836 RepID=B8CGM1_THAPS)

HSP 1 Score: 155 bits (393), Expect = 1.810e-46
Identity = 75/85 (88.24%), Postives = 81/85 (95.29%), Query Frame = 0 
Query:    1 QYVPCDVSTVCFGTAASMGAFLLGAGAKGKRRSLPNARIMIHQPLGGAQGQAADIEIQAKEILFIRSLLNSYMAEYCEQPIDKIQ 85
            QYVPCDVSTVCFG AASMGAFLLGAGA GKRR+LPNARIMIHQPLGGAQGQAADIEIQAKEILFIR +LN+Y+AEYC+QP DKI+
Sbjct:   75 QYVPCDVSTVCFGMAASMGAFLLGAGAPGKRRALPNARIMIHQPLGGAQGQAADIEIQAKEILFIREVLNTYIAEYCDQPKDKIE 159
[Close]
BLAST of mRNA_H-elongata_contig169530.4312.1 vs. uniprot
Match: A0A7S4EKY3_9STRA (ATP-dependent Clp protease proteolytic subunit n=2 Tax=Bacillariaceae TaxID=33852 RepID=A0A7S4EKY3_9STRA)

HSP 1 Score: 157 bits (396), Expect = 4.780e-46
Identity = 75/85 (88.24%), Postives = 82/85 (96.47%), Query Frame = 0 
Query:    1 QYVPCDVSTVCFGTAASMGAFLLGAGAKGKRRSLPNARIMIHQPLGGAQGQAADIEIQAKEILFIRSLLNSYMAEYCEQPIDKIQ 85
            QYVPCDVSTVCFG AASMGAFLLGAGAKGKRR+LPN+RIMIHQPLGGAQGQAADIEIQAKEILFIR +LN+Y+AEYC+QP DKI+
Sbjct:  146 QYVPCDVSTVCFGMAASMGAFLLGAGAKGKRRALPNSRIMIHQPLGGAQGQAADIEIQAKEILFIREVLNTYIAEYCDQPKDKIE 230
[Close]
BLAST of mRNA_H-elongata_contig169530.4312.1 vs. uniprot
Match: W7TMY3_9STRA (ATP-dependent Clp protease proteolytic subunit n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TMY3_9STRA)

HSP 1 Score: 157 bits (397), Expect = 5.030e-46
Identity = 77/85 (90.59%), Postives = 82/85 (96.47%), Query Frame = 0 
Query:    1 QYVPCDVSTVCFGTAASMGAFLLGAGAKGKRRSLPNARIMIHQPLGGAQGQAADIEIQAKEILFIRSLLNSYMAEYCEQPIDKIQ 85
            Q+VPCDV+TVCFG AASMGAFLLGAGAKGKRRSLPNARIMIHQPLGGAQGQAADIEIQAKEILF+RSLLNSY++EY  QPIDKIQ
Sbjct:  159 QFVPCDVATVCFGMAASMGAFLLGAGAKGKRRSLPNARIMIHQPLGGAQGQAADIEIQAKEILFVRSLLNSYISEYTGQPIDKIQ 243
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BLAST of mRNA_H-elongata_contig169530.4312.1 vs. uniprot
Match: A0A7S2XR52_9STRA (ATP-dependent Clp protease proteolytic subunit n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XR52_9STRA)

HSP 1 Score: 157 bits (396), Expect = 6.240e-46
Identity = 75/85 (88.24%), Postives = 82/85 (96.47%), Query Frame = 0 
Query:    1 QYVPCDVSTVCFGTAASMGAFLLGAGAKGKRRSLPNARIMIHQPLGGAQGQAADIEIQAKEILFIRSLLNSYMAEYCEQPIDKIQ 85
            QYVPCDVSTVCFG AASMGAFLLGAGAKGKRR+LPN+RIMIHQPLGGAQGQAADIEIQAKEILFIR +LN+Y+AEYC+QP DKI+
Sbjct:  156 QYVPCDVSTVCFGMAASMGAFLLGAGAKGKRRALPNSRIMIHQPLGGAQGQAADIEIQAKEILFIREVLNTYIAEYCDQPKDKIE 240
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BLAST of mRNA_H-elongata_contig169530.4312.1 vs. uniprot
Match: A0A6U2ZXF5_9STRA (ATP-dependent Clp protease proteolytic subunit n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A6U2ZXF5_9STRA)

HSP 1 Score: 155 bits (393), Expect = 1.360e-45
Identity = 74/85 (87.06%), Postives = 82/85 (96.47%), Query Frame = 0 
Query:    1 QYVPCDVSTVCFGTAASMGAFLLGAGAKGKRRSLPNARIMIHQPLGGAQGQAADIEIQAKEILFIRSLLNSYMAEYCEQPIDKIQ 85
            QYVPCDV+TVCFG AASMGAFLLGAGAKGKRR+LPN+RIMIHQPLGGAQGQAADIEIQAKEILFIR +LN+Y+AEYC+QP DKI+
Sbjct:  146 QYVPCDVNTVCFGMAASMGAFLLGAGAKGKRRALPNSRIMIHQPLGGAQGQAADIEIQAKEILFIREVLNTYIAEYCDQPKDKIE 230
[Close]
BLAST of mRNA_H-elongata_contig169530.4312.1 vs. uniprot
Match: A0A7S2Q591_9STRA (ATP-dependent Clp protease proteolytic subunit n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2Q591_9STRA)

HSP 1 Score: 155 bits (392), Expect = 2.440e-45
Identity = 74/85 (87.06%), Postives = 81/85 (95.29%), Query Frame = 0 
Query:    1 QYVPCDVSTVCFGTAASMGAFLLGAGAKGKRRSLPNARIMIHQPLGGAQGQAADIEIQAKEILFIRSLLNSYMAEYCEQPIDKIQ 85
            QY+PCDVSTVCFG AASMGAFLLGAGA GKRR+LPNARIMIHQPLGGAQGQAADIEIQAKEILFIR +LN+Y+AEYC+QP DKI+
Sbjct:  155 QYIPCDVSTVCFGMAASMGAFLLGAGAPGKRRALPNARIMIHQPLGGAQGQAADIEIQAKEILFIREVLNTYIAEYCDQPKDKIE 239
[Close]
BLAST of mRNA_H-elongata_contig169530.4312.1 vs. uniprot
Match: A0A7S2R2R8_9STRA (ATP-dependent Clp protease proteolytic subunit n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R2R8_9STRA)

HSP 1 Score: 150 bits (379), Expect = 3.070e-45
Identity = 72/85 (84.71%), Postives = 80/85 (94.12%), Query Frame = 0 
Query:    1 QYVPCDVSTVCFGTAASMGAFLLGAGAKGKRRSLPNARIMIHQPLGGAQGQAADIEIQAKEILFIRSLLNSYMAEYCEQPIDKIQ 85
            QY+PCDVSTVCFG AASMGAFLLGAGA GKR++LPNARIMIHQPLGGAQGQAADIEIQAKEILFIR +LN+Y+AEY +QP DKI+
Sbjct:    7 QYIPCDVSTVCFGMAASMGAFLLGAGAPGKRKALPNARIMIHQPLGGAQGQAADIEIQAKEILFIREVLNTYIAEYTDQPKDKIE 91
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig169530.4312.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LGQ4_ECTSI1.870e-5097.65ATP-dependent Clp protease proteolytic subunit n=2... [more]
A0A7S0G7S0_9STRA1.180e-4789.41ATP-dependent Clp protease proteolytic subunit (Fr... [more]
A0A835YSZ8_9STRA1.840e-4794.12ATP-dependent Clp protease proteolytic subunit n=1... [more]
B8CGM1_THAPS1.810e-4688.24ATP-dependent Clp protease proteolytic subunit n=3... [more]
A0A7S4EKY3_9STRA4.780e-4688.24ATP-dependent Clp protease proteolytic subunit n=2... [more]
W7TMY3_9STRA5.030e-4690.59ATP-dependent Clp protease proteolytic subunit n=2... [more]
A0A7S2XR52_9STRA6.240e-4688.24ATP-dependent Clp protease proteolytic subunit n=1... [more]
A0A6U2ZXF5_9STRA1.360e-4587.06ATP-dependent Clp protease proteolytic subunit n=1... [more]
A0A7S2Q591_9STRA2.440e-4587.06ATP-dependent Clp protease proteolytic subunit n=1... [more]
A0A7S2R2R8_9STRA3.070e-4584.71ATP-dependent Clp protease proteolytic subunit n=1... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001907ATP-dependent Clp protease proteolytic subunitPRINTSPR00127CLPPROTEASEPcoord: 9..26
score: 64.17
coord: 30..49
score: 63.5
IPR023562Clp protease proteolytic subunit /Translocation-enhancing protein TepAPFAMPF00574CLP_proteasecoord: 1..85
e-value: 9.5E-33
score: 113.6
IPR023562Clp protease proteolytic subunit /Translocation-enhancing protein TepAPANTHERPTHR10381ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNITcoord: 5..84
NoneNo IPR availableGENE3D3.90.226.10coord: 1..85
e-value: 9.9E-28
score: 99.0
NoneNo IPR availablePANTHERPTHR10381:SF12ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT 5, CHLOROPLASTICcoord: 5..84
NoneNo IPR availableTMHMMTMhelixcoord: 10..27
IPR018215ClpP, Ser active sitePROSITEPS00381CLP_PROTEASE_SERcoord: 9..20
IPR033135ClpP, histidine active sitePROSITEPS00382CLP_PROTEASE_HIScoord: 31..44
IPR029045ClpP/crotonase-like domain superfamilySUPERFAMILY52096ClpP/crotonasecoord: 1..84

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig169530contigH-elongata_contig169530:582..1167 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig169530.4312.1mRNA_H-elongata_contig169530.4312.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig169530 582..1167 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig169530.4312.1 ID=prot_H-elongata_contig169530.4312.1|Name=mRNA_H-elongata_contig169530.4312.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=85bp
QYVPCDVSTVCFGTAASMGAFLLGAGAKGKRRSLPNARIMIHQPLGGAQG
QAADIEIQAKEILFIRSLLNSYMAEYCEQPIDKIQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001907ClpP
IPR023562ClpP/TepA
IPR018215ClpP_Ser_AS
IPR033135ClpP_His_AS
IPR029045ClpP/crotonase-like_dom_sf