prot_H-elongata_contig16945.4308.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig16945.4308.1
Unique Nameprot_H-elongata_contig16945.4308.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length111
Homology
BLAST of mRNA_H-elongata_contig16945.4308.1 vs. uniprot
Match: A0A6H5KD49_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD49_9PHAE)

HSP 1 Score: 122 bits (307), Expect = 8.370e-34
Identity = 58/97 (59.79%), Postives = 70/97 (72.16%), Query Frame = 0
Query:    1 MDGHVIARSTVYAIAHRAIDAITACSGLDCKWPNNDDEIVEAAKAFKERSAYGVVDKCFGAMDGLFVRMKRPTRNETAEPNSYYSGHKRGFGMNFQV 97
            MDGHVIARST Y +    I+A+ AC  L+CKWP  +D    AA+ F+ RS+  VV KC GAMD LFVRM +P+  E AEPN YY+GHK+GFGMNFQV
Sbjct:   31 MDGHVIARSTAYHVTSTVINALNACPELNCKWPEGEDA-ARAAELFRNRSSMDVVRKCVGAMDVLFVRMIKPSAKEVAEPNLYYNGHKKGFGMNFQV 126          
BLAST of mRNA_H-elongata_contig16945.4308.1 vs. uniprot
Match: A0A6H5L6B6_9PHAE (DDE Tnp4 domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6B6_9PHAE)

HSP 1 Score: 125 bits (313), Expect = 6.320e-32
Identity = 61/111 (54.95%), Postives = 77/111 (69.37%), Query Frame = 0
Query:    1 MDGHVIARSTVYAIAHRAIDAITACSGLDCKWPNNDDEIVEAAKAFKERSAYGVVDKCFGAMDGLFVRMKRPTRNETAEPNSYYSGHKRGFGMNFQ-VLDSNHSSIALMQH 110
            MDGHVIARST Y +    I+A+ AC  L+CKWP  +D    AA+ F+ RS+  VV KC GA DGLFVRM +P+  E AEPN YY+GHK+GFGMNFQ V D+ +  +A M +
Sbjct:  117 MDGHVIARSTAYHVTSTVINALNACPELNCKWPEGEDA-ARAAELFRNRSSMDVVRKCVGATDGLFVRMIKPSAKEVAEPNLYYNGHKKGFGMNFQAVCDAQYRIMAWMMN 226          
BLAST of mRNA_H-elongata_contig16945.4308.1 vs. uniprot
Match: A0A6H5JJA1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJA1_9PHAE)

HSP 1 Score: 117 bits (292), Expect = 5.250e-29
Identity = 56/101 (55.45%), Postives = 67/101 (66.34%), Query Frame = 0
Query:    1 MDGHVIARSTVYAIAHRAIDAITACSGLDCKWPNNDDEIVEAAKAFKERSAYGVVDKCFGAMDGLFVRMKRPTRNETAEPNSYYSGHKRGFGMNFQVLDSN 101
            MDGHVIARST Y +    I+A+ AC  L+CKWP  +D + E        +   VV KC GAMDGLFVRM +P+  E AEPN YY+GHK+GFGMNFQV   N
Sbjct:  128 MDGHVIARSTAYHVTSTVINALNACPELNCKWPEGED-LPEPPSFSATAALMDVVRKCVGAMDGLFVRMIKPSAKEVAEPNLYYNGHKKGFGMNFQVCSQN 227          
BLAST of mRNA_H-elongata_contig16945.4308.1 vs. uniprot
Match: A0A6H5K3F2_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3F2_9PHAE)

HSP 1 Score: 115 bits (289), Expect = 1.900e-28
Identity = 57/107 (53.27%), Postives = 71/107 (66.36%), Query Frame = 0
Query:    1 MDGHVIARSTVYAIAHRAIDAITACSGLDCKWPNNDDEIVEAAKAFKERSAYGVVDKCFGAMDGLFVRMKRPTRNETAEPNSYYSGHKRGFGMNFQ-VLDSNHSSIA 106
            MDG+VIARST YAI HR IDAI     LDC WP  +D + +    ++ RS  GV+  C GAMDGLFVRM +P+      P S+YSGHK+GFGMNFQ V ++ +  IA
Sbjct:  124 MDGNVIARSTAYAIVHRVIDAINQTRELDCVWPEGEDALDQCGM-YRRRSTNGVIRMCVGAMDGLFVRMTQPSLRRHVNPRSFYSGHKKGFGMNFQGVCNARYEIIA 229          
BLAST of mRNA_H-elongata_contig16945.4308.1 vs. uniprot
Match: A0A6H5K6M2_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6M2_9PHAE)

HSP 1 Score: 110 bits (274), Expect = 2.920e-26
Identity = 53/98 (54.08%), Postives = 66/98 (67.35%), Query Frame = 0
Query:    1 MDGHVIARSTVYAIAHRAIDAITACSGLDCKWPNNDDEIVEAAKAFKERSAYGVVDKCFGAMDGLFVRMKRPTRNETAEPNSYYSGHKRGFGMNFQVL 98
            MD +VIA+ST YAI HR IDAI     L+CKWP  DD   +A + ++ RS  GV+ +C GAMDGLFVR+  P     A P S+YSGHK+ FGMNFQ +
Sbjct:  128 MDSNVIAKSTAYAIVHRVIDAINQTRQLNCKWPYGDDAEAQA-ELYRRRSTNGVIRRCVGAMDGLFVRLIPPCLKRHAVPGSFYSGHKKAFGMNFQGI 224          
BLAST of mRNA_H-elongata_contig16945.4308.1 vs. uniprot
Match: A0A6H5JYU2_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYU2_9PHAE)

HSP 1 Score: 108 bits (271), Expect = 2.380e-25
Identity = 52/100 (52.00%), Postives = 66/100 (66.00%), Query Frame = 0
Query:    1 MDGHVIARSTVYAIAHRAIDAITACSGLDCKWPNNDDEIVEAAKAFKERSAYGVVDKCFGAMDGLFVRMKRPTRNETAEPNSYYSGHKRGFGMNFQVLDS 100
            MD HVIARST Y      I+A+ ACS ++CKWP  +D    AA+ F+ RS+  VV KC GAMDG FVRM +P+  E  EPN   +GHK+GFG NFQ  ++
Sbjct:    1 MDDHVIARSTAYHETSTVINALNACSEVNCKWPEGEDA-ARAAELFRNRSSIDVVRKCVGAMDGFFVRMIKPSAKEVVEPNLCNNGHKKGFGTNFQAANT 99          
BLAST of mRNA_H-elongata_contig16945.4308.1 vs. uniprot
Match: A0A6H5KCG0_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCG0_9PHAE)

HSP 1 Score: 101 bits (252), Expect = 1.800e-23
Identity = 47/98 (47.96%), Postives = 60/98 (61.22%), Query Frame = 0
Query:    1 MDGHVIARSTVYAIAHRAIDAITACSGLDCKWPNNDDEIVEAAKAFKERSAYGVVDKCFGAMDGLFVRMKRPTRNETAEPNSYYSGHKRGFGMNFQVL 98
            MDG V A+ST YAI +R IDAI      DC WP  DD + +    +++RS   V+  C GAMDGLFV +  P+      P  +YSGHK+GFGMNFQ +
Sbjct:   58 MDGCVFAKSTAYAIVYRVIDAINQTREFDCVWPEGDDALDQCG-VYRQRSTNNVIHMCVGAMDGLFVLIFEPSLRRHVNPRGFYSGHKKGFGMNFQAV 154          
BLAST of mRNA_H-elongata_contig16945.4308.1 vs. uniprot
Match: A0A6H5JVS8_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVS8_9PHAE)

HSP 1 Score: 92.4 bits (228), Expect = 4.240e-20
Identity = 45/90 (50.00%), Postives = 55/90 (61.11%), Query Frame = 0
Query:    1 MDGHVIARSTVYAIAHRAIDAITACSGLDCKWPNNDDEIVEAAKAFKERSAYGVVDKCFGAMDGLFVRMKRPTRNETAEPNSYYSGHKRG 90
            MDGHVIARST Y +    I+A+ AC  L+CKWP                +   VV KC GAMDGLFVRM +P+  E AEPN YY+GH++G
Sbjct:  128 MDGHVIARSTAYHVTSTVINALNACPELNCKWPE---------------ARMDVVRKCVGAMDGLFVRMIKPSAKEVAEPNLYYNGHRKG 202          
BLAST of mRNA_H-elongata_contig16945.4308.1 vs. uniprot
Match: A0A6H5KNF2_9PHAE (DDE Tnp4 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNF2_9PHAE)

HSP 1 Score: 74.3 bits (181), Expect = 1.080e-13
Identity = 35/54 (64.81%), Postives = 41/54 (75.93%), Query Frame = 0
Query:   54 VVDKCFGAMDGLFVRMKRPTRNETAEPNSYYSGHKRGFGMNFQ-VLDSNHSSIA 106
            VV KC GAMDGLFVRM +P+  E AEPN YY+GHK GFGMNFQ V D+ +  +A
Sbjct:   17 VVRKCVGAMDGLFVRMIKPSAKEVAEPNLYYNGHKNGFGMNFQAVCDAQYRIVA 70          
BLAST of mRNA_H-elongata_contig16945.4308.1 vs. uniprot
Match: A0A6T6LH99_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A6T6LH99_9RHOD)

HSP 1 Score: 68.9 bits (167), Expect = 2.340e-11
Identity = 34/92 (36.96%), Postives = 51/92 (55.43%), Query Frame = 0
Query:    6 IARSTVYAIAHRAIDAITACSGLDCKWPNNDDEIVEAAKAFKERSAYGVVDKCFGAMDGLFVRMKRPTRNETAEPNSYYSGHKRGFGMNFQV 97
            ++RS  Y    R ++AI  C  L   +P   DE+  +AKAF + S   V+  C   +DG    +K P+R+ETA   SY+SGH + +G+N Q 
Sbjct:  135 LSRSGFYMCVKRGMEAILNCDELAYHFPVELDEVEASAKAFSKYSTNEVITGCVACIDGFLCEIKTPSRSETANVRSYFSGHYQLYGINIQA 226          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig16945.4308.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
A0A6H5KD49_9PHAE8.370e-3459.79Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L6B6_9PHAE6.320e-3254.95DDE Tnp4 domain-containing protein n=3 Tax=Ectocar... [more]
A0A6H5JJA1_9PHAE5.250e-2955.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K3F2_9PHAE1.900e-2853.27DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5K6M2_9PHAE2.920e-2654.08DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5JYU2_9PHAE2.380e-2552.00Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KCG0_9PHAE1.800e-2347.96DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5JVS8_9PHAE4.240e-2050.00DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5KNF2_9PHAE1.080e-1364.81DDE Tnp4 domain-containing protein n=2 Tax=Ectocar... [more]
A0A6T6LH99_9RHOD2.340e-1136.96Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig16945contigH-elongata_contig16945:6136..6468 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig16945.4308.1mRNA_H-elongata_contig16945.4308.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig16945 6136..6468 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig16945.4308.1 ID=prot_H-elongata_contig16945.4308.1|Name=mRNA_H-elongata_contig16945.4308.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=111bp
MDGHVIARSTVYAIAHRAIDAITACSGLDCKWPNNDDEIVEAAKAFKERS
AYGVVDKCFGAMDGLFVRMKRPTRNETAEPNSYYSGHKRGFGMNFQVLDS
NHSSIALMQH*
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