prot_H-elongata_contig1692.4300.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig1692.4300.1
Unique Nameprot_H-elongata_contig1692.4300.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length812
Homology
BLAST of mRNA_H-elongata_contig1692.4300.1 vs. uniprot
Match: A0A1Y1I0D4_KLENI (Uncharacterized protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I0D4_KLENI)

HSP 1 Score: 97.1 bits (240), Expect = 5.910e-17
Identity = 140/573 (24.43%), Postives = 214/573 (37.35%), Query Frame = 0
Query:   81 TSSPLEVRYNVSYSVNYASKEFLSDFVNDLTKRARISLEGGIRTWLLPIDVVSEAVEAMLIEYGMASELINSTFGSSEITVLVVSPRQTNKLSSRLGGLADNPKAR-----DQEKPELLPYRFVEPDQVEQATPTTAAHSYDDSNERHSWCTSSWVGRSKTLFLDLGAVGCEYEVHSTPTKS-GPLTGDVPLAVPALSSPENWLHITRKNFGLKKNHGLKQAMSRAGSGGGSPDLATFFNLQLTSYLVSAMRTTLAPAVPTAPGPGDISDVVMIPLIVFRGVDRANKVGVADAELLEEGSLALDNVNVTHVSRVVNAMALPGQEVVIVGAAHSLSEHPQVAVALEKSFATKRVMDVKSGRKNIHPQLEVLPGGYIDGDRLLLEMRSAGDMLASSLLSDIRADSVLRLDVALAAGYMDQGSTRVNDAV---------------------------VRVLPVFVFCMEDLDEPLLDTSTSSAARNPK----------RDRPASFFEGGSHFWAEAGGDAVLVIHSESGAATQPVTSGLLRALHGANAPDHWWSWEQQGPVLDLSWARGHHPFAPY 610
            T  PLE+ Y + Y+V + S   ++   N  T RA + L G      L  DV  E          + +  +N+T       V+  S        S+ GG   NP        + +K ++ P     P  +    P             +S  TS+W+G  +    D+ A  C Y   S P    GP T      +P L      + I R    L +    K   ++             F  QL++ ++SA++  +AP +       D ++ V++P+IV R     N           +G  A+D   +  +   +  +A P QEVV+VGA HSL EH Q+AVAL K+     V  V S     H    ++   Y+DG  L+ EMR   D+LA+ +L     D              D GS R                                 RV+PV+V  +  +D+ LL    +  A +P+          R  P S+                 +IH    A T+ + +G+   L G  AP   WS  +     +  WA GHHPF P+
Sbjct:   96 TGQPLEISYQLKYTVFHVSPNLVTSLQN--TIRASLVLTGKE----LDPDVYME----------LPTYELNTTAVEKRFDVIYKSYFGQKLTQSQEGG---NPGPAVIFIANFDKMKMNPNDTAVPPPMSGGVPLNDGGFLYRYRYMNSGLTSAWLGAGRYAVADISAGPCSYGRISAPEGVIGPFT------LPRLRR----VIIPRWKTALGREETEKVRRTK-------------FRGQLSTLVMSAVQHLIAPDIRFETL--DSAERVLVPIIVLRNHALFNP--------FVQGPEAID---LHRMETEIKRLAQPNQEVVVVGAVHSLHEHGQLAVALAKATRGASV-HVPSPDNRQHT---IVSKTYVDGAVLIEEMRHTADVLAAGMLEVAHPDVAKSFFDQPTTDAADDGSAREEPPKRDGKPGGKKQPGERRRLAQKSRGPSRGTRVVPVYVLSLAGMDQELLLEGETLYAASPQAVIVLQTNANRSVPTSYVSESE------------IIHINPAAPTRHIIAGVASVLSGLAAPHERWSVIRNRAQENWMWANGHHPFGPF 597          
BLAST of mRNA_H-elongata_contig1692.4300.1 vs. uniprot
Match: A0A1S3UUV7_VIGRR (uncharacterized protein LOC106768849 n=14 Tax=Phaseoleae TaxID=163735 RepID=A0A1S3UUV7_VIGRR)

HSP 1 Score: 87.0 bits (214), Expect = 7.670e-14
Identity = 96/394 (24.37%), Postives = 162/394 (41.12%), Query Frame = 0
Query:  316 QLTSYLVSAMRTTLAPAVPTAPGPGDISDVVMIPLIVFRGVDRANKVGVADAELLEEGSLALDNVNVTHVSRVVNAMALPGQEVVIVGAAHSLSEHPQVAVALEKSFATKRVMDVKS-GRKNIHPQLEVLPGGYIDGDRLLLEMRSAGDMLASSLL--------------------SDIRADSVLRLDVALAAGYMDQGSTRVNDAV----------VRVLPVFVFCMEDLDEPLLDTSTSSAARNPKRDRPASFFEGGSHFWAEAGGDAVLVI------------------HSESGAATQPVTSGLLRALHGANAPDHWWSWEQQGPVLDLSWARGHHPFAPYGFAGCEPGELFVDVARRNAFTSRAAVVAATLFEAADTLEDLAESALTSEL 660
            QL S + + +   +AP V       D++  +++P+IV +  +R N        ++E+G     ++++  +   V +M   GQE+VI+G AHSL  H ++A+A+ K+     + + K+ GR  +H +       Y+DG  L  EM  + D+LA+ LL                    SD   DS+L+     A+     G  R                RV+PVFV  + D+D                   P    E  S  W     D V+V+                  H+    A + + +GL   + G +AP    S   + PV++  WA G HPF P+        ++  DVA RN+  +R   V   + + ++T++  A   L + L
Sbjct:  315 QLASLVSTTVEHVIAPDVRFETV--DLTSRLLVPIIVLQNHNRYN--------IMEKGHNY--SIDIERIEAEVKSMLHDGQELVIIGGAHSLHRHEKLAIAVSKATRGHSLQETKNDGRFLVHTKT------YLDGAILKEEMERSADVLAAGLLEVADPSLSSKYFLRQNWMDESDESTDSILKHKPLWASYNSKYGGKRKKKVKKQGDLQPTYGTRVIPVFVLSLADVD-------------------PNLMMEDESMVWTS--NDVVIVLEHQNEKIPLSYVSETQRRHALPSQAQRHILAGLASVVGGLSAPYEKASHVHERPVVNWLWAAGCHPFGPFSNTS-HISQMLQDVALRNSIYARVDSVLRKIRDTSETVQTFAAEYLKTPL 668          
BLAST of mRNA_H-elongata_contig1692.4300.1 vs. uniprot
Match: A0A3Q8BTD4_9SPER (Uncharacterized protein n=20 Tax=Cupressaceae TaxID=3367 RepID=A0A3Q8BTD4_9SPER)

HSP 1 Score: 80.1 bits (196), Expect = 1.100e-11
Identity = 92/372 (24.73%), Postives = 148/372 (39.78%), Query Frame = 0
Query:  316 QLTSYLVSAMRTTLAPAVPTAPGPGDISDVVMIPLIVFRGVDRANKVGVADAELLEEGSLALDNVNVTHVSRVVNAMALPGQEVVIVGAAHSLSEHPQVAVALEKSFATKRVMDVKS-GRKNIHPQLEVLPGGYIDGDRLLLEMRSAGDMLASSLLSDIRADSVLRLDVALAAGYMDQGSTRVNDAV-----------------------------------VRVLPVFVFCMEDLDEPLLDTSTSSAARNPKRDRPASFFEGGSHFWAEAGGDAVLVIHSESGA------------------ATQPVTSGLLRALHGANAPDHWWSWEQQGPVLDLSWARGHHPFAPYGFAGCEPGELFVDVARRNAFTSR 633
            QL++ + + +   +AP V       D++  ++IP+IV +  +  N        L E G     ++N+  +   V  M   GQEVV+VG AHSL  H ++++A+ K+     V + KS GR ++  ++      Y+DG  L  EM  + D+LA+ LL    AD  L     L   +M       +  +                                    RV+PVFV  +  +D+ LL                    EG +  W     DAV+V+  E+                    + + + +GL  A+ G +AP    S   Q PVL+  WA G HPF P+     +  ++  D A RN   +R
Sbjct:  325 QLSALIYTTIEHVIAPDVRFETV--DLATRILIPVIVLQNHNHYN--------LFEGGHNY--SINMPAIETEVKKMLHTGQEVVLVGGAHSLHRHEKLSIAVSKALRGHSVHETKSDGRFHVRTKM------YLDGSILKDEMERSADVLAAGLLEV--ADPELSSKFFLRQRWMADAKDSEDSVIKSRPNWLSYREKFSRNKKEKMTRKRQQGELYRTYGTRVIPVFVLSLAGMDQELL-------------------MEGETQVWTS--NDAVIVLQHENNEFPLSYVSETKRRYAAPMLSQRHIIAGLASAVGGLSAPYEKASHIHQRPVLNWLWATGCHPFGPFSNVS-KISQMLRDTALRNTIYAR 654          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig1692.4300.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A1Y1I0D4_KLENI5.910e-1724.43Uncharacterized protein n=1 Tax=Klebsormidium nite... [more]
A0A1S3UUV7_VIGRR7.670e-1424.37uncharacterized protein LOC106768849 n=14 Tax=Phas... [more]
A0A3Q8BTD4_9SPER1.100e-1124.73Uncharacterized protein n=20 Tax=Cupressaceae TaxI... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR31515:SF0TRANSMEMBRANE PROTEINcoord: 226..660
NoneNo IPR availablePANTHERPTHR31515FAMILY NOT NAMEDcoord: 226..660
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 773..792
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 793..811
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..772
NoneNo IPR availableTMHMMTMhelixcoord: 771..793

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig1692contigH-elongata_contig1692:11163..15263 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig1692.4300.1mRNA_H-elongata_contig1692.4300.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig1692 11139..15353 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig1692.4300.1 ID=prot_H-elongata_contig1692.4300.1|Name=mRNA_H-elongata_contig1692.4300.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=812bp
MCGHLWRPTLELHLKIKVFLLDLNHGDQRDDGRLFVQPPALERTLHEALP
FYNAPVVPSASMSRQSRAKRSSNGIQDRPLTSSPLEVRYNVSYSVNYASK
EFLSDFVNDLTKRARISLEGGIRTWLLPIDVVSEAVEAMLIEYGMASELI
NSTFGSSEITVLVVSPRQTNKLSSRLGGLADNPKARDQEKPELLPYRFVE
PDQVEQATPTTAAHSYDDSNERHSWCTSSWVGRSKTLFLDLGAVGCEYEV
HSTPTKSGPLTGDVPLAVPALSSPENWLHITRKNFGLKKNHGLKQAMSRA
GSGGGSPDLATFFNLQLTSYLVSAMRTTLAPAVPTAPGPGDISDVVMIPL
IVFRGVDRANKVGVADAELLEEGSLALDNVNVTHVSRVVNAMALPGQEVV
IVGAAHSLSEHPQVAVALEKSFATKRVMDVKSGRKNIHPQLEVLPGGYID
GDRLLLEMRSAGDMLASSLLSDIRADSVLRLDVALAAGYMDQGSTRVNDA
VVRVLPVFVFCMEDLDEPLLDTSTSSAARNPKRDRPASFFEGGSHFWAEA
GGDAVLVIHSESGAATQPVTSGLLRALHGANAPDHWWSWEQQGPVLDLSW
ARGHHPFAPYGFAGCEPGELFVDVARRNAFTSRAAVVAATLFEAADTLED
LAESALTSELLSSGRRMNLCPDGAATQQVWGRAFEDAAMFGGLPEDRVLQ
VVGVHTSLREAVVSFESQLWKAKESSLADAIAAMDVSRSNALAVLDLAVE
VANELQWCECTFARSTKGPHTPWMLFVVFLLASLYGLVRVVAVGRRIMLK
YLGSFGPEPGY*
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