prot_H-elongata_contig1692.4299.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig1692.4299.1
Unique Nameprot_H-elongata_contig1692.4299.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length159
Homology
BLAST of mRNA_H-elongata_contig1692.4299.1 vs. uniprot
Match: D8LPQ2_ECTSI (ARFRP1, ARF-like Ras superfamily GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LPQ2_ECTSI)

HSP 1 Score: 304 bits (778), Expect = 8.430e-104
Identity = 147/158 (93.04%), Postives = 154/158 (97.47%), Query Frame = 0
Query:    1 MKGIFKKVPGIPPSKIPPTVGLNVGKMDVGGCKLTFWDLGGQVRVRSLWEKYYADAHGLIFVMDSADVGRFEEARLAFETVKEQGELHGVPLLMLANKQDLPEAISTADISVQFDMHKITKVAFRLQSCSGLTCEGISEGILWIVNEAKKRTRPRVDA 158
            MKGIFKKV GIPPSKIPPTVGLNVGKMDVGGCKLTFWDLGGQVRVRSLWEKYYADAHGLIFVMDSADVGRFEEAR+AF+TVKEQGELHGVPL+MLANKQDLPEAISTADISVQFDMHKITKVAFRLQ CSGLTC+G++EGI WIV+EAKKR RPRVDA
Sbjct:   37 MKGIFKKVQGIPPSKIPPTVGLNVGKMDVGGCKLTFWDLGGQVRVRSLWEKYYADAHGLIFVMDSADVGRFEEARMAFDTVKEQGELHGVPLMMLANKQDLPEAISTADISVQFDMHKITKVAFRLQPCSGLTCDGVAEGIHWIVDEAKKRARPRVDA 194          
BLAST of mRNA_H-elongata_contig1692.4299.1 vs. uniprot
Match: A0A835YY21_9STRA (ARFRP1, ARF-like ras superfamily GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YY21_9STRA)

HSP 1 Score: 215 bits (548), Expect = 8.290e-69
Identity = 99/153 (64.71%), Postives = 126/153 (82.35%), Query Frame = 0
Query:    1 MKGIFKKVPGIPPSKIPPTVGLNVGKMDVGGCKLTFWDLGGQVRVRSLWEKYYADAHGLIFVMDSADVGRFEEARLAFETVKEQGELHGVPLLMLANKQDLPEAISTADISVQFDMHKITKVAFRLQSCSGLTCEGISEGILWIVNEAKKRTR 153
            MKGIFKKVPGIPP+KIPPT+GLNV KMD+GG  +TFWD+GGQVR+R+LWE+YYADAH LI VMDSAD  RFEEA+LAF  V+EQ ELH +PLL+LANKQD+  A S  DI+ QFD HK+  V FR+ + S L+ EG++EGI W++ +A+++T+
Sbjct:   37 MKGIFKKVPGIPPAKIPPTIGLNVAKMDIGGVSVTFWDVGGQVRLRALWERYYADAHALICVMDSADAARFEEAQLAFHAVREQAELHALPLLLLANKQDVAGACSGGDIAAQFDAHKVMGVPFRVHAVSALSGEGVNEGISWLIAKAREKTQ 189          
BLAST of mRNA_H-elongata_contig1692.4299.1 vs. uniprot
Match: A0A7S2BA16_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BA16_9STRA)

HSP 1 Score: 209 bits (533), Expect = 9.400e-66
Identity = 93/153 (60.78%), Postives = 123/153 (80.39%), Query Frame = 0
Query:    1 MKGIFKKVPGIPPSKIPPTVGLNVGKMDVGGCKLTFWDLGGQVRVRSLWEKYYADAHGLIFVMDSADVGRFEEARLAFETVKEQGELHGVPLLMLANKQDLPEAISTADISVQFDMHKITKVAFRLQSCSGLTCEGISEGILWIVNEAKKRTR 153
            MKG+F K  GIPP +IPPT+GLN+GKMDVG C++ FWDLGGQVR+RS+WEKYYA+AHG++FV+DSADVGR EEA+LAF+ V+E  EL G+P+L+LANKQDLP A++  DI++ F++H +     RLQ  S LTCEGI +G+ W+V E++   R
Sbjct:   96 MKGLFNKQQGIPPERIPPTIGLNIGKMDVGTCRVIFWDLGGQVRMRSIWEKYYAEAHGMVFVIDSADVGRMEEAKLAFDAVREHEELRGIPVLLLANKQDLPGAMAIEDIAMHFEIHNLPPRLVRLQPASCLTCEGIEDGVRWVVEESRTADR 248          
BLAST of mRNA_H-elongata_contig1692.4299.1 vs. uniprot
Match: W7TPL1_9STRA (1-family small gtpase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TPL1_9STRA)

HSP 1 Score: 194 bits (494), Expect = 1.380e-60
Identity = 89/153 (58.17%), Postives = 119/153 (77.78%), Query Frame = 0
Query:    2 KGIFKKVPGIPPSKIPPTVGLNVGKMDVGGCKLTFWDLGGQVRVRSLWEKYYADAHGLIFVMDSADVGRFEEARLAFETVKEQGELHGVPLLMLANKQDLPEAISTADISVQFDMHKITKV-AFRLQSCSGLTCEGISEGILWIVNEAKKRTR 153
            KGIF+KV GIPP KI PTVGLNVGKMD+ GC +  WDLGGQVR+RS+W+KYYADAHG++FV+D+ADVGRFEEA+LAF ++ +  +L  VP+L+ ANKQDLP A+S  D++  F++ ++ +    ++ SCS LTCEG+  G+ W+V EAK   R
Sbjct:   38 KGIFRKVQGIPPEKITPTVGLNVGKMDIEGCFVILWDLGGQVRMRSIWDKYYADAHGVVFVLDAADVGRFEEAKLAFASILDHEDLGDVPVLLFANKQDLPGALSEEDVAESFEIDRVLRHRVIQVHSCSALTCEGLESGVRWLVQEAKGLAR 190          
BLAST of mRNA_H-elongata_contig1692.4299.1 vs. uniprot
Match: A0A4D9CTS6_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CTS6_9STRA)

HSP 1 Score: 191 bits (486), Expect = 1.690e-53
Identity = 88/153 (57.52%), Postives = 117/153 (76.47%), Query Frame = 0
Query:    2 KGIFKKVPGIPPSKIPPTVGLNVGKMDVGGCKLTFWDLGGQVRVRSLWEKYYADAHGLIFVMDSADVGRFEEARLAFETVKEQGELHGVPLLMLANKQDLPEAISTADISVQFDMHKITKV-AFRLQSCSGLTCEGISEGILWIVNEAKKRTR 153
            KGIF+KV GIPP KI PTVGLNVGKMD+ GC +  WDLGGQVR+RS+W+KYYADAHG++FV+D+ADVGRFEEA+LAF ++ +  +L  VP+L+ ANKQDLP A+S  D++  F + ++ +    ++  CS LTCEG+  G+ W+V EAK   R
Sbjct: 1044 KGIFRKVQGIPPEKITPTVGLNVGKMDIEGCFVILWDLGGQVRMRSIWDKYYADAHGVVFVLDAADVGRFEEAKLAFASILDHEDLGDVPVLLFANKQDLPGALSEEDVAESFKIDRVLRHRVIQVHPCSALTCEGLESGVRWLVQEAKGLAR 1196          
BLAST of mRNA_H-elongata_contig1692.4299.1 vs. uniprot
Match: A0A7S2WHH1_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WHH1_9STRA)

HSP 1 Score: 155 bits (393), Expect = 7.360e-45
Identity = 84/175 (48.00%), Postives = 109/175 (62.29%), Query Frame = 0
Query:    1 MKGIFKKVPG-IPPSKIPPTVGLNVGKMDVGGCKLTFWDLGGQVRVRSLWEKYYADAHGLIFVMDSADVGRFEEARLAFETVKEQGELHGVPLLMLANKQDLPEAISTADISVQF-----DMHKITKVAF---------------------RLQSCSGLTCEGISEGILWIVNEA 148
            MKGIF+K    IP  KIPPTVGLN+G+MD+  C++ FWDLGGQ+ +RS+W+KYY++AHGLIFV+DSAD+ RFEEA+ A E++    EL GVPLL+ ANKQDL  +    +I+  F      + KI   A                      +LQ  S LTC GI +GI W+VN A
Sbjct:   37 MKGIFQKAANQIPLDKIPPTVGLNIGRMDIDNCRVIFWDLGGQIALRSIWDKYYSEAHGLIFVLDSADIDRFEEAKAAMESIASHPELAGVPLLVCANKQDLATSRGYDEINEYFRVVSESLGKIGSNADSEQNSMNASEHILSLGKRRERKLQPVSALTCSGIEDGIRWLVNAA 211          
BLAST of mRNA_H-elongata_contig1692.4299.1 vs. uniprot
Match: A0A8J6CF14_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CF14_DIALT)

HSP 1 Score: 153 bits (387), Expect = 2.620e-44
Identity = 73/155 (47.10%), Postives = 109/155 (70.32%), Query Frame = 0
Query:    1 MKGIFKKVPGIPPSKIPPTVGLNVGKMDVGGCKLTFWDLGGQVRVRSLWEKYYADAHGLIFVMDSADVGRFEEARLAFETVKEQGELHGVPLLMLANKQDLPEAISTADISVQFDMHKITKVA--FRLQSCSGLTCEGISEGILWIVNEAKKRTR 153
            MKG+F+K+  + P KIPPTVGLN+G+M+VG  KL FWDLGGQ  +R +WEKY+A+ HGL++V+D+AD  RF+E+R  FE + +  +L GVP+L+LANKQDL  A +  +I  +F    +   +  +R++  S +T  GI++GI W+V+  K  +R
Sbjct:   37 MKGLFQKIEPLAPEKIPPTVGLNIGRMEVGRVKLIFWDLGGQSGLRGIWEKYFAEVHGLVYVIDAADDQRFDESRRIFEALVKHPDLAGVPVLILANKQDLHSAATIDEIDERFGFGSLCAPSQQYRIEPVSAITGSGIADGITWMVDMLKLSSR 191          
BLAST of mRNA_H-elongata_contig1692.4299.1 vs. uniprot
Match: A0A484KDI7_9ASTE (Uncharacterized protein n=5 Tax=Convolvulaceae TaxID=4118 RepID=A0A484KDI7_9ASTE)

HSP 1 Score: 150 bits (378), Expect = 6.980e-43
Identity = 75/163 (46.01%), Postives = 108/163 (66.26%), Query Frame = 0
Query:    1 MKGIFKKVPGIPPSKIPPTVGLNVGKMDVGGCKLTFWDLGGQVRVRSLWEKYYADAHGLIFVMDSADVGRFEEARLAFETVKEQGELHGVPLLMLANKQDLPEAISTADISVQFDMHKITKVAFRLQSCSGLTCEGISEGILWIVN--EAKKRT---RPRVDA 158
            +K  F  + G+PP +I PTVGLN+G+++V   KL FWDLGGQ  +RS+WEKYY +AH ++FV+D+A   RFE+A+ A E V    +LHG PLL+LANKQDL EA S  ++    D+ K+ +  +++Q+ S     GI E + W+V+  E  KRT   + RVD+
Sbjct:   37 LKSQFLNIEGLPPDRIVPTVGLNIGRVEVSNSKLVFWDLGGQPGLRSIWEKYYEEAHAVLFVVDAACPSRFEDAKSALEKVLRHEDLHGAPLLILANKQDLAEAASAEELDRYLDLKKLGERVYKIQAVSAYEGIGIKESVNWLVDAMERSKRTEMLKLRVDS 199          
BLAST of mRNA_H-elongata_contig1692.4299.1 vs. uniprot
Match: A0A067F975_CITSI (Uncharacterized protein n=19 Tax=rosids TaxID=71275 RepID=A0A067F975_CITSI)

HSP 1 Score: 149 bits (376), Expect = 1.490e-42
Identity = 70/154 (45.45%), Postives = 103/154 (66.88%), Query Frame = 0
Query:    1 MKGIFKKVPGIPPSKIPPTVGLNVGKMDVGGCKLTFWDLGGQVRVRSLWEKYYADAHGLIFVMDSADVGRFEEARLAFETVKEQGELHGVPLLMLANKQDLPEAISTADISVQFDMHKITKVAFRLQSCSGLTCEGISEGILWIVN--EAKKRT 152
            +K ++  V G+PP +I PTVGLN+G+++V   KL FWDLGGQ  +RS+WEKYY +AH ++FV+D+A   RFE+++ A E V    +L G PLL+LANKQDLP+A+S  +++   D+ K+ +     ++ SG    GI E + W+V   E  KRT
Sbjct:   37 LKSVYSNVEGLPPDRIVPTVGLNIGRIEVSNSKLVFWDLGGQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTALEKVLRNEDLQGAPLLILANKQDLPDAVSADELARYLDLKKLDERVCMFEAVSGYDGFGIKESVEWLVEVMERSKRT 190          
BLAST of mRNA_H-elongata_contig1692.4299.1 vs. uniprot
Match: A0A834T1J8_9FABA (ADP-ribosylation factor-related protein 1 n=2 Tax=Caesalpinioideae TaxID=3804 RepID=A0A834T1J8_9FABA)

HSP 1 Score: 149 bits (376), Expect = 1.930e-42
Identity = 74/162 (45.68%), Postives = 107/162 (66.05%), Query Frame = 0
Query:    1 MKGIFKKVPGIPPSKIPPTVGLNVGKMDVGGCKLTFWDLGGQVRV--------RSLWEKYYADAHGLIFVMDSADVGRFEEARLAFETVKEQGELHGVPLLMLANKQDLPEAISTADISVQFDMHKITKVAFRLQSCSGLTCEGISEGILWIVN--EAKKRT 152
            +K I+  + G+PP +I PTVGLN+G+++V   KL FWDLGGQ+ +        RS+WEKYY +AH +IFV+D+A   RFE+A+ A E V    +L G PLL+LANKQDLPEA+S+ +I+   D+ K+ +  +  ++ SG    GI E + W+V+  E  KRT
Sbjct:   37 LKSIYSNLEGLPPDRIVPTVGLNIGRIEVSNTKLVFWDLGGQILMKSFYQPGLRSIWEKYYEEAHAVIFVIDAACPSRFEDAKSALEKVLRHEDLQGAPLLILANKQDLPEAVSSDEIARYLDLKKLDERVYMFEAVSGYDGMGIKESVEWLVDVMERSKRT 198          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig1692.4299.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LPQ2_ECTSI8.430e-10493.04ARFRP1, ARF-like Ras superfamily GTPase n=2 Tax=Ec... [more]
A0A835YY21_9STRA8.290e-6964.71ARFRP1, ARF-like ras superfamily GTPase n=1 Tax=Tr... [more]
A0A7S2BA16_9STRA9.400e-6660.78Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
W7TPL1_9STRA1.380e-6058.171-family small gtpase n=1 Tax=Nannochloropsis gadi... [more]
A0A4D9CTS6_9STRA1.690e-5357.52Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7S2WHH1_9STRA7.360e-4548.00Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
A0A8J6CF14_DIALT2.620e-4447.10Uncharacterized protein n=1 Tax=Diacronema lutheri... [more]
A0A484KDI7_9ASTE6.980e-4346.01Uncharacterized protein n=5 Tax=Convolvulaceae Tax... [more]
A0A067F975_CITSI1.490e-4245.45Uncharacterized protein n=19 Tax=rosids TaxID=7127... [more]
A0A834T1J8_9FABA1.930e-4245.68ADP-ribosylation factor-related protein 1 n=2 Tax=... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006689Small GTPase superfamily, ARF/SAR typePRINTSPR00328SAR1GTPBPcoord: 45..70
score: 31.45
coord: 18..42
score: 32.24
coord: 90..111
score: 45.72
IPR006689Small GTPase superfamily, ARF/SAR typePFAMPF00025Arfcoord: 15..147
e-value: 2.2E-37
score: 128.2
NoneNo IPR availableSMARTSM00178sar_sub_1coord: 1..148
e-value: 0.0012
score: 13.0
NoneNo IPR availableSMARTSM00177arf_sub_2coord: 1..152
e-value: 7.0E-21
score: 85.4
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 5..151
e-value: 0.002
score: -67.0
NoneNo IPR availableGENE3D3.40.50.300coord: 4..147
e-value: 5.8E-41
score: 141.8
NoneNo IPR availablePANTHERPTHR45909FAMILY NOT NAMEDcoord: 4..153
NoneNo IPR availablePROSITEPS51417ARFcoord: 1..148
score: 14.16
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 16..129
e-value: 2.3E-13
score: 48.2
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 14..150

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig1692contigH-elongata_contig1692:8430..10822 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig1692.4299.1mRNA_H-elongata_contig1692.4299.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig1692 7878..10932 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig1692.4299.1 ID=prot_H-elongata_contig1692.4299.1|Name=mRNA_H-elongata_contig1692.4299.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=159bp
MKGIFKKVPGIPPSKIPPTVGLNVGKMDVGGCKLTFWDLGGQVRVRSLWE
KYYADAHGLIFVMDSADVGRFEEARLAFETVKEQGELHGVPLLMLANKQD
LPEAISTADISVQFDMHKITKVAFRLQSCSGLTCEGISEGILWIVNEAKK
RTRPRVDA*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006689Small_GTPase_ARF/SAR
IPR005225Small_GTP-bd_dom
IPR027417P-loop_NTPase