prot_H-elongata_contig16913.4297.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig16913.4297.1
Unique Nameprot_H-elongata_contig16913.4297.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length91
Homology
BLAST of mRNA_H-elongata_contig16913.4297.1 vs. uniprot
Match: A0A6H5KRX1_9PHAE (Homeobox domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRX1_9PHAE)

HSP 1 Score: 151 bits (381), Expect = 5.430e-41
Identity = 68/81 (83.95%), Postives = 75/81 (92.59%), Query Frame = 0
Query:   11 SALSNRKGSRHRLTPMAKEILEGWLAKHWLNPYPTEAEKLHLSQICKITVTQVNNWMMNVRVRRCRTKRIGVATGPEQITY 91
            S  +NRKGSRHRLTP AKEILEGWLAKHWLNPYPTE +KL+L+Q C ITVTQVNNWMMNVRVRRCRTK+IG+ATGPE+ITY
Sbjct:  461 SVYNNRKGSRHRLTPQAKEILEGWLAKHWLNPYPTEEQKLYLAQNCHITVTQVNNWMMNVRVRRCRTKKIGLATGPEEITY 541          
BLAST of mRNA_H-elongata_contig16913.4297.1 vs. uniprot
Match: D7FSL4_ECTSI (Transcription factor protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSL4_ECTSI)

HSP 1 Score: 148 bits (373), Expect = 9.490e-41
Identity = 66/78 (84.62%), Postives = 73/78 (93.59%), Query Frame = 0
Query:   14 SNRKGSRHRLTPMAKEILEGWLAKHWLNPYPTEAEKLHLSQICKITVTQVNNWMMNVRVRRCRTKRIGVATGPEQITY 91
            +NRKGSRHRLTP AKEILEGWLA HWLNPYPTE +KL+L+Q C ITVTQVNNWMMNVRVRRCRTK+IG+ATGPE+ITY
Sbjct:  309 NNRKGSRHRLTPQAKEILEGWLANHWLNPYPTEEQKLYLAQNCHITVTQVNNWMMNVRVRRCRTKKIGLATGPEEITY 386          
BLAST of mRNA_H-elongata_contig16913.4297.1 vs. uniprot
Match: D2V5D6_NAEGR (Homeobox protein PKNOX1-like protein n=1 Tax=Naegleria gruberi TaxID=5762 RepID=D2V5D6_NAEGR)

HSP 1 Score: 60.5 bits (145), Expect = 1.170e-8
Identity = 29/61 (47.54%), Postives = 37/61 (60.66%), Query Frame = 0
Query:   16 RKGSRHRLTPMAKEILEGWLAKHWLNPYPTEAEKLHLSQICKITVTQVNNWMMNVRVRRCR 76
            R   R  L   A  +L+ WL  H+L+PYPTE+EK  L     +T+TQVNNW +N RVR  R
Sbjct:  581 RSKRRGNLPRHATNVLKSWLYSHFLHPYPTESEKKDLCMETGLTLTQVNNWFINQRVRTWR 641          
BLAST of mRNA_H-elongata_contig16913.4297.1 vs. uniprot
Match: UPI0010FB3FD3 (iroquois-class homeodomain protein irx-4-B-like isoform X1 n=3 Tax=Nylanderia fulva TaxID=613905 RepID=UPI0010FB3FD3)

HSP 1 Score: 60.1 bits (144), Expect = 1.460e-8
Identity = 27/60 (45.00%), Postives = 40/60 (66.67%), Query Frame = 0
Query:   14 SNRKGSRHRLTPMAKEILEGWLAKHWLNPYPTEAEKLHLSQICKITVTQVNNWMMNVRVR 73
            S+R+  R  L   A  IL+ WL +H  N YP+E+EKLHLS++ ++++ QV NW +N R R
Sbjct:   81 SSRRKRRGNLPKEAVNILKRWLMEHRYNAYPSESEKLHLSELTRLSILQVCNWFINARRR 140          
BLAST of mRNA_H-elongata_contig16913.4297.1 vs. uniprot
Match: UPI00188519D9 (homeobox protein PKNOX2-like n=2 Tax=Pollicipes pollicipes TaxID=41117 RepID=UPI00188519D9)

HSP 1 Score: 59.7 bits (143), Expect = 1.960e-8
Identity = 26/58 (44.83%), Postives = 38/58 (65.52%), Query Frame = 0
Query:   16 RKGSRHRLTPMAKEILEGWLAKHWLNPYPTEAEKLHLSQICKITVTQVNNWMMNVRVR 73
            RK  R  L   + ++L+ WL +H  +PYP+EAEK HLS   ++++ QVNNW +N R R
Sbjct:  242 RKQKRGVLPKHSTDVLKSWLFQHMAHPYPSEAEKHHLSAATRLSLVQVNNWFINARRR 299          
BLAST of mRNA_H-elongata_contig16913.4297.1 vs. uniprot
Match: UPI001CFCA5A7 (uncharacterized protein n=1 Tax=Naegleria lovaniensis TaxID=51637 RepID=UPI001CFCA5A7)

HSP 1 Score: 58.9 bits (141), Expect = 4.100e-8
Identity = 28/61 (45.90%), Postives = 37/61 (60.66%), Query Frame = 0
Query:   16 RKGSRHRLTPMAKEILEGWLAKHWLNPYPTEAEKLHLSQICKITVTQVNNWMMNVRVRRCR 76
            R   R  L   A  +L+ WL  H+L+PYP+E+EK  L     +T+TQVNNW +N RVR  R
Sbjct:  682 RSKRRGNLPRHATNVLKSWLFSHFLHPYPSESEKKDLCMETGLTLTQVNNWFINQRVRTWR 742          
BLAST of mRNA_H-elongata_contig16913.4297.1 vs. uniprot
Match: A0A6A5BJI4_NAEFO (Homeobox domain-containing protein n=1 Tax=Naegleria fowleri TaxID=5763 RepID=A0A6A5BJI4_NAEFO)

HSP 1 Score: 58.9 bits (141), Expect = 4.110e-8
Identity = 28/61 (45.90%), Postives = 37/61 (60.66%), Query Frame = 0
Query:   16 RKGSRHRLTPMAKEILEGWLAKHWLNPYPTEAEKLHLSQICKITVTQVNNWMMNVRVRRCR 76
            R   R  L   A  +L+ WL  H+L+PYP+E+EK  L     +T+TQVNNW +N RVR  R
Sbjct:  705 RSKRRGNLPRHATNVLKSWLFSHFLHPYPSESEKKDLCMETGLTLTQVNNWFINQRVRTWR 765          
BLAST of mRNA_H-elongata_contig16913.4297.1 vs. uniprot
Match: UPI001879BEB4 (LOW QUALITY PROTEIN: homeobox protein TGIF2LY n=1 Tax=Manis javanica TaxID=9974 RepID=UPI001879BEB4)

HSP 1 Score: 57.0 bits (136), Expect = 4.840e-8
Identity = 26/63 (41.27%), Postives = 38/63 (60.32%), Query Frame = 0
Query:   11 SALSNRKGSRHRLTPMAKEILEGWLAKHWLNPYPTEAEKLHLSQICKITVTQVNNWMMNVRVR 73
            ++L N+K  +      + +IL  WL  H L PYP+EAEKL LS+   ++  QV+NW +N R R
Sbjct:   33 ASLDNKKKQKRYFPTESVKILRDWLCDHQLKPYPSEAEKLMLSEQTNLSFLQVSNWFVNARRR 95          
BLAST of mRNA_H-elongata_contig16913.4297.1 vs. uniprot
Match: A0A182SNY3_9DIPT (Homeobox domain-containing protein n=1 Tax=Anopheles maculatus TaxID=74869 RepID=A0A182SNY3_9DIPT)

HSP 1 Score: 57.8 bits (138), Expect = 5.190e-8
Identity = 31/63 (49.21%), Postives = 39/63 (61.90%), Query Frame = 0
Query:   14 SNRKGSRHRLTPMAKE---ILEGWLAKHWLNPYPTEAEKLHLSQICKITVTQVNNWMMNVRVR 73
            SN+  SR R   + K+   IL+ WL +H  N YPT+AEKL LSQ   +TV QV NW +N R R
Sbjct:   19 SNQSSSRKRRGNLPKQSVKILKRWLYEHRFNAYPTDAEKLTLSQEANLTVLQVCNWFINARRR 81          
BLAST of mRNA_H-elongata_contig16913.4297.1 vs. uniprot
Match: A0A0S7IZ12_9TELE (TGIF2 (Fragment) n=1 Tax=Poeciliopsis prolifica TaxID=188132 RepID=A0A0S7IZ12_9TELE)

HSP 1 Score: 56.2 bits (134), Expect = 5.950e-8
Identity = 28/69 (40.58%), Postives = 39/69 (56.52%), Query Frame = 0
Query:    5 PLIRSGSALSNRKGSRHRLTPMAKEILEGWLAKHWLNPYPTEAEKLHLSQICKITVTQVNNWMMNVRVR 73
            PL  SG  +  ++  R  L   + +IL  WL +H  N YP+E EKL LS   K++V Q+ NW +N R R
Sbjct:   32 PLDLSGRGVLGKRRRRGNLPKESVQILRSWLYEHRFNAYPSEQEKLSLSNQTKLSVLQICNWFINARRR 100          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig16913.4297.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KRX1_9PHAE5.430e-4183.95Homeobox domain-containing protein n=1 Tax=Ectocar... [more]
D7FSL4_ECTSI9.490e-4184.62Transcription factor protein n=1 Tax=Ectocarpus si... [more]
D2V5D6_NAEGR1.170e-847.54Homeobox protein PKNOX1-like protein n=1 Tax=Naegl... [more]
UPI0010FB3FD31.460e-845.00iroquois-class homeodomain protein irx-4-B-like is... [more]
UPI00188519D91.960e-844.83homeobox protein PKNOX2-like n=2 Tax=Pollicipes po... [more]
UPI001CFCA5A74.100e-845.90uncharacterized protein n=1 Tax=Naegleria lovanien... [more]
A0A6A5BJI4_NAEFO4.110e-845.90Homeobox domain-containing protein n=1 Tax=Naegler... [more]
UPI001879BEB44.840e-841.27LOW QUALITY PROTEIN: homeobox protein TGIF2LY n=1 ... [more]
A0A182SNY3_9DIPT5.190e-849.21Homeobox domain-containing protein n=1 Tax=Anophel... [more]
A0A0S7IZ12_9TELE5.950e-840.58TGIF2 (Fragment) n=1 Tax=Poeciliopsis prolifica Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001356Homeobox domainSMARTSM00389HOX_1coord: 16..81
e-value: 2.0E-7
score: 40.7
IPR001356Homeobox domainPROSITEPS50071HOMEOBOX_2coord: 14..77
score: 11.37
NoneNo IPR availableGENE3D1.10.10.60coord: 7..75
e-value: 7.3E-19
score: 69.5
NoneNo IPR availablePANTHERPTHR11850:SF211HOMEOBOX PROTEIN CEH-20-RELATEDcoord: 14..73
NoneNo IPR availablePANTHERPTHR11850HOMEOBOX PROTEIN TRANSCRIPTION FACTORScoord: 14..73
IPR008422Homeobox KN domainPFAMPF05920Homeobox_KNcoord: 34..73
e-value: 2.1E-13
score: 49.9
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 16..79

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig16913contigH-elongata_contig16913:5627..6623 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig16913.4297.1mRNA_H-elongata_contig16913.4297.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig16913 5627..6623 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig16913.4297.1 ID=prot_H-elongata_contig16913.4297.1|Name=mRNA_H-elongata_contig16913.4297.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=91bp
MGPKPLIRSGSALSNRKGSRHRLTPMAKEILEGWLAKHWLNPYPTEAEKL
HLSQICKITVTQVNNWMMNVRVRRCRTKRIGVATGPEQITY
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001356Homeobox_dom
IPR008422Homeobox_KN_domain
IPR009057Homeobox-like_sf