mRNA_H-elongata_contig169105.4295.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig169105.4295.1 vs. uniprot
Match: D7FGT3_ECTSI (ABC1 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FGT3_ECTSI) HSP 1 Score: 244 bits (624), Expect = 1.190e-74 Identity = 110/126 (87.30%), Postives = 126/126 (100.00%), Query Frame = 1
Query: 1 QNLKLLVKVLDKLDPKFDGADRNWVSIYEESAKLLYKEIDYLNEADNAVRFRENFRETPWVKVPEVYWNLTSERVVTMEYVPGVKINNLEEIERRGIDRKILARRSAEAYLTQLCRHGFFHCDPHP 378
+NLKLLVKVLDKLDPKFDGADR+WVSIYEESAKLLYKEIDY+NEA+NA+RF+ENF++TPWVKVP+VYWN+TSERVVTME+VPGVKINN++EI+RRGIDRK+LA+RSAEAYLTQLCRHGFFHCDPHP
Sbjct: 333 KNLKLLVKVLDKLDPKFDGADRDWVSIYEESAKLLYKEIDYINEAENAIRFKENFQDTPWVKVPDVYWNMTSERVVTMEFVPGVKINNIDEIDRRGIDRKLLAKRSAEAYLTQLCRHGFFHCDPHP 458
BLAST of mRNA_H-elongata_contig169105.4295.1 vs. uniprot
Match: A0A7S2P799_BIGNA (Hypothetical protein (Fragment) n=2 Tax=Bigelowiella natans TaxID=227086 RepID=A0A7S2P799_BIGNA) HSP 1 Score: 211 bits (536), Expect = 4.680e-63 Identity = 94/125 (75.20%), Postives = 111/125 (88.80%), Query Frame = 1
Query: 4 NLKLLVKVLDKLDPKFDGADRNWVSIYEESAKLLYKEIDYLNEADNAVRFRENFRETPWVKVPEVYWNLTSERVVTMEYVPGVKINNLEEIERRGIDRKILARRSAEAYLTQLCRHGFFHCDPHP 378
NL+LL +LDKLDPK DGA R+WV IYEESA+LLYKEIDY NEA NA RF+ENF + PW+KVP++YW TS+RV+TMEYVP VKINN+EEIERRGIDRK+LA+RSA++YL QLCR+GFFHCDPHP
Sbjct: 392 NLRLLAVILDKLDPKTDGAQRDWVRIYEESARLLYKEIDYTNEAKNAERFKENFADVPWIKVPDIYWETTSKRVLTMEYVPSVKINNIEEIERRGIDRKLLAKRSADSYLKQLCRYGFFHCDPHP 516
BLAST of mRNA_H-elongata_contig169105.4295.1 vs. uniprot
Match: A0A7S0XEN1_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XEN1_9STRA) HSP 1 Score: 206 bits (524), Expect = 3.040e-61 Identity = 95/126 (75.40%), Postives = 111/126 (88.10%), Query Frame = 1
Query: 1 QNLKLLVKVLDKLDPKFDGADRNWVSIYEESAKLLYKEIDYLNEADNAVRFRENFRETPWVKVPEVYWNLTSERVVTMEYVPGVKINNLEEIERRGIDRKILARRSAEAYLTQLCRHGFFHCDPHP 378
+N+K+L +LDKLDPK DGA R+WVSIYEESAKLLYKEIDY EA N++RF+ENF PWVKVP+VY NLTS RVVTMEYVPG+KIN++ +IE GIDRK+LA+RSAE+YLTQLCRHGFFHCDPHP
Sbjct: 169 KNIKVLAVILDKLDPKTDGASRDWVSIYEESAKLLYKEIDYKLEALNSIRFKENFANNPWVKVPDVYLNLTSPRVVTMEYVPGIKINDIAKIEAAGIDRKLLAKRSAESYLTQLCRHGFFHCDPHP 294
BLAST of mRNA_H-elongata_contig169105.4295.1 vs. uniprot
Match: A0A482SBS9_9ARCH (AarF/ABC1/UbiB kinase family protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SBS9_9ARCH) HSP 1 Score: 199 bits (507), Expect = 6.310e-60 Identity = 86/126 (68.25%), Postives = 110/126 (87.30%), Query Frame = 1
Query: 1 QNLKLLVKVLDKLDPKFDGADRNWVSIYEESAKLLYKEIDYLNEADNAVRFRENFRETPWVKVPEVYWNLTSERVVTMEYVPGVKINNLEEIERRGIDRKILARRSAEAYLTQLCRHGFFHCDPHP 378
+N+K+L K+LDK DPK DGA R+W+SIY+ESAKLLYKEIDY EA N++RF++NF+ PWVKVP+VY+N+T+ V+ MEYVPG+K+NN+ IE GIDR++LA+RSAE+YLTQLCRHGFFHCDPHP
Sbjct: 138 KNIKVLAKILDKFDPKTDGAQRDWISIYDESAKLLYKEIDYQLEALNSIRFQDNFKNVPWVKVPDVYFNMTTTNVIVMEYVPGIKVNNIAAIEAAGIDRQLLAKRSAESYLTQLCRHGFFHCDPHP 263
BLAST of mRNA_H-elongata_contig169105.4295.1 vs. uniprot
Match: A0A7S0H9B0_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0H9B0_9EUKA) HSP 1 Score: 200 bits (508), Expect = 2.570e-58 Identity = 88/125 (70.40%), Postives = 108/125 (86.40%), Query Frame = 1
Query: 4 NLKLLVKVLDKLDPKFDGADRNWVSIYEESAKLLYKEIDYLNEADNAVRFRENFRETPWVKVPEVYWNLTSERVVTMEYVPGVKINNLEEIERRGIDRKILARRSAEAYLTQLCRHGFFHCDPHP 378
NL+ + +LDKLDPK DGA R+WV IYEESA+LLYKEIDY+NE A RF NF +TPW+KVP++YW+ +S+RV+TMEYVP VKINN+EEIE+RGIDRK LA+RSA++YL QLCR+GFFHCDPHP
Sbjct: 264 NLRFIAVILDKLDPKTDGAQRDWVRIYEESARLLYKEIDYINEGQQAERFASNFADTPWIKVPKIYWDTSSKRVLTMEYVPSVKINNIEEIEKRGIDRKKLAQRSADSYLKQLCRYGFFHCDPHP 388
BLAST of mRNA_H-elongata_contig169105.4295.1 vs. uniprot
Match: A0A7S2V580_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V580_9STRA) HSP 1 Score: 187 bits (476), Expect = 5.050e-58 Identity = 86/113 (76.11%), Postives = 99/113 (87.61%), Query Frame = 1
Query: 40 DPKFDGADRNWVSIYEESAKLLYKEIDYLNEADNAVRFRENFRETPWVKVPEVYWNLTSERVVTMEYVPGVKINNLEEIERRGIDRKILARRSAEAYLTQLCRHGFFHCDPHP 378
DPK DGADR+WVSIYEESAKLLYKEIDY NEA NA F +NF+ WVKVPE+ W L S+RV+TMEYVPGVKIN+++EIERRGI+R +LA RSAE+YLTQLCR+GFFHCDPHP
Sbjct: 1 DPKSDGADRDWVSIYEESAKLLYKEIDYENEAKNAQLFNDNFKSVDWVKVPEIKWGLVSKRVLTMEYVPGVKINDIKEIERRGINRDLLAARSAESYLTQLCRYGFFHCDPHP 113
BLAST of mRNA_H-elongata_contig169105.4295.1 vs. uniprot
Match: A0A7S4D846_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D846_HETAK) HSP 1 Score: 197 bits (502), Expect = 4.050e-57 Identity = 89/126 (70.63%), Postives = 110/126 (87.30%), Query Frame = 1
Query: 1 QNLKLLVKVLDKLDPKFDGADRNWVSIYEESAKLLYKEIDYLNEADNAVRFRENFRETPWVKVPEVYWNLTSERVVTMEYVPGVKINNLEEIERRGIDRKILARRSAEAYLTQLCRHGFFHCDPHP 378
+NL+LL ++LD DPKFDGADR+WVSIY ESAKLLY+EIDY EA+ +F+E+F + WVKVP+V W+ S RV+TMEYVPG+KIN+LEEI+RRGIDRK+LARRSAE+YLTQLCR+G+FHCDPHP
Sbjct: 313 RNLELLARLLDLADPKFDGADRDWVSIYRESAKLLYREIDYRIEAEQGQKFKEDFAKVEWVKVPDVEWDKVSSRVITMEYVPGIKINDLEEIDRRGIDRKLLARRSAESYLTQLCRNGYFHCDPHP 438
BLAST of mRNA_H-elongata_contig169105.4295.1 vs. uniprot
Match: A0A7S2TV21_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TV21_9EUKA) HSP 1 Score: 194 bits (493), Expect = 6.680e-57 Identity = 85/125 (68.00%), Postives = 105/125 (84.00%), Query Frame = 1
Query: 4 NLKLLVKVLDKLDPKFDGADRNWVSIYEESAKLLYKEIDYLNEADNAVRFRENFRETPWVKVPEVYWNLTSERVVTMEYVPGVKINNLEEIERRGIDRKILARRSAEAYLTQLCRHGFFHCDPHP 378
NLK L +LDKLDPK DGA R+WV IYEESA+LLYKEIDY NE NA RF NF++ W+KVP++YWN TS RV+TMEYVP KIN++E+I+ +GID+K+LA+RSA++YL QLC+HGFFHCDPHP
Sbjct: 145 NLKFLAVILDKLDPKTDGASRDWVRIYEESARLLYKEIDYENEGKNAERFANNFKDVSWIKVPKIYWNTTSPRVLTMEYVPSTKINDIEKIQAQGIDQKLLAKRSADSYLAQLCKHGFFHCDPHP 269
BLAST of mRNA_H-elongata_contig169105.4295.1 vs. uniprot
Match: A0A2V3J5Q8_9FLOR (ABC1 domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5Q8_9FLOR) HSP 1 Score: 190 bits (483), Expect = 1.390e-54 Identity = 85/125 (68.00%), Postives = 105/125 (84.00%), Query Frame = 1
Query: 1 QNLKLLVKVLDKLDPKFDGADRNWVSIYEESAKLLYKEIDYLNEADNAVRFRENFRETPWVKVPEVYWNLTSERVVTMEYVPGVKINNLEEIERRGIDRKILARRSAEAYLTQLCRHGFFHCDPH 375
+NLK+L +LD+LDPK DG RNWV IY+ESAKLLY+EIDY+NE NA RFR+NF PWVKVP +YW LT+++V+TMEYVPG+KIN+ + IER G+DRK+LA RSAE+YLTQL RHG+FH DPH
Sbjct: 283 KNLKVLAVMLDRLDPKSDGTSRNWVQIYDESAKLLYQEIDYINEGRNADRFRDNFDSVPWVKVPGIYWQLTTQQVLTMEYVPGIKINDYDAIERAGLDRKLLAERSAESYLTQLLRHGYFHTDPH 407
BLAST of mRNA_H-elongata_contig169105.4295.1 vs. uniprot
Match: R7QM65_CHOCR (ABC1 domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QM65_CHOCR) HSP 1 Score: 192 bits (487), Expect = 1.850e-54 Identity = 88/125 (70.40%), Postives = 104/125 (83.20%), Query Frame = 1
Query: 1 QNLKLLVKVLDKLDPKFDGADRNWVSIYEESAKLLYKEIDYLNEADNAVRFRENFRETPWVKVPEVYWNLTSERVVTMEYVPGVKINNLEEIERRGIDRKILARRSAEAYLTQLCRHGFFHCDPH 375
+NLK+L ++LDK DPK DGA RNWV IY+ESAKLLY+EIDY+ E NA RFR NFR TPWVKVP +YW+LTS RV+TMEYVPG+KIN+ E IE G+DR LA+RSAE+YLTQL RHG+FH DPH
Sbjct: 475 KNLKVLARMLDKFDPKSDGASRNWVQIYDESAKLLYEEIDYVMEGKNADRFRNNFRSTPWVKVPGIYWDLTSTRVLTMEYVPGIKINDYEAIENAGLDRSRLAKRSAESYLTQLLRHGYFHTDPH 599 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig169105.4295.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig169105.4295.1 >prot_H-elongata_contig169105.4295.1 ID=prot_H-elongata_contig169105.4295.1|Name=mRNA_H-elongata_contig169105.4295.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=126bp QNLKLLVKVLDKLDPKFDGADRNWVSIYEESAKLLYKEIDYLNEADNAVRback to top mRNA from alignment at H-elongata_contig169105:139..1002+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig169105.4295.1 ID=mRNA_H-elongata_contig169105.4295.1|Name=mRNA_H-elongata_contig169105.4295.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=864bp|location=Sequence derived from alignment at H-elongata_contig169105:139..1002+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig169105:139..1002+ >mRNA_H-elongata_contig169105.4295.1 ID=mRNA_H-elongata_contig169105.4295.1|Name=mRNA_H-elongata_contig169105.4295.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=756bp|location=Sequence derived from alignment at H-elongata_contig169105:139..1002+ (Himanthalia elongata Himel1 dioecious)back to top |