mRNA_H-elongata_contig105193.429.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig105193.429.1
Unique NamemRNA_H-elongata_contig105193.429.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig105193.429.1 vs. uniprot
Match: A0A6H5JMT3_9PHAE (THUMP domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JMT3_9PHAE)

HSP 1 Score: 509 bits (1312), Expect = 3.410e-174
Identity = 264/356 (74.16%), Postives = 288/356 (80.90%), Query Frame = 1
Query:    1 WSRYMQQDQTLSVDAVSLKETDELTHSHFTALTVKASQNAVVDQFRDHGKRPSVDTDSPDLPLVVYLNRGRAQLYRSLSGVRSMHKRGYRDAMHAASLKENVAAGLLLASGWDPETQTLADPMCGSGTLVIEAALIAMRRAPGLVAMGAFRNRESRGMKWSEKGRWHPAISSWPDYDAGLWQGVVEEALQAARSSPPAAIMGNDLHHGALSLAWRDAKAAGVESFIMLSDEDASRWRPPISVDLAVTNPPWDYRMDDDAERSWRDLLEFLRRELAEKNAWVLSGNPFLSRVLRMKSEQNVYLATGGIELRWLQYRLNAYRGDTRDDRKRASLGRRGGGSRPKKVPRLRDRPAVDRW 1068
            WSRYM+Q QTL VDA+     D LTHSHFTALTVK   NAVVDQ RD GKRPSVDT++ DLPLVVYL+RGRA LYRSLSG RSMHKRGYRDAMHAASLKENVAAGLLLASGWDPETQ LADPMCGSGTLVIEAALIA+RRAPGLVAMGA+      G   ++   W PA+++WPD+D  LW+  V EALQ  R+ PPAAIMGND HHGALSLAWRDAKAAGVE  I L DED  RWRPP SV LAVTNPPWDYR+D  AE+SW  LLEFLRRE+AEK+AWVLSGNP LSR LRMKSEQN+YL+TGG+ELRWL+Y LN YRGD    R R   GR  GG RPKKVPR  DRPA+DRW
Sbjct:  356 WSRYMEQGQTLCVDAILGVVPDGLTHSHFTALTVK---NAVVDQLRDDGKRPSVDTENADLPLVVYLDRGRALLYRSLSGTRSMHKRGYRDAMHAASLKENVAAGLLLASGWDPETQALADPMCGSGTLVIEAALIALRRAPGLVAMGAY-----GGGGRAKAAGWKPAVTAWPDFDPVLWRETVGEALQLQRAKPPAAIMGNDWHHGALSLAWRDAKAAGVEDCITLFDEDVGRWRPPTSVGLAVTNPPWDYRLDQGAEKSWLGLLEFLRREVAEKDAWVLSGNPALSRTLRMKSEQNMYLSTGGVELRWLKYHLNEYRGD----RGRKIGGR--GGPRPKKVPRKHDRPAIDRW 697          
BLAST of mRNA_H-elongata_contig105193.429.1 vs. uniprot
Match: A0A836C9G3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9G3_9STRA)

HSP 1 Score: 368 bits (944), Expect = 1.620e-117
Identity = 192/319 (60.19%), Postives = 226/319 (70.85%), Query Frame = 1
Query:    1 WSRYMQQDQTLSVDAVSLKETDELTHSHFTALTVKASQNAVVDQFRDH---GKRPSVDTDSPDLPLVVYLNRGRAQLYRSLSGVRSMHKRGYRDAMHAASLKENVAAGLLLASGWDPETQTLADPMCGSGTLVIEAALIAMRRAPGLVAMGAFRNRESRGMKWSEKGRWHPAISSWPDYDAGLWQGVVEEALQAARSSPPAAIMGNDLHHGALSLAWRDAKAAGVESFIMLSDEDASRWRPPISVDLAVTNPPWDYRMDDDAERSWRDLLEFLRRELAEKNAWVLSGNPFLSRVLRMKSEQNVYLATGGIELRWLQYRL 948
            WS YM   QTL VDAV  +  + LTH+HFTALT+K   NAVVDQFR     G RPSVDT+ PDLPLV+Y++ GRA LYR LSG RSMHKRGYR AMHAASLKENVAAGLLLASGWDP+TQ+L DPMCGS TL IEAALIA+RRAPGL AMG F  RE    + ++ G W P +  WPD+DA  WQ  VE A   AR + P  IM ND H GALSLA  DA+ AGV   I   +EDA R+ PP + D+ VTNPPWD R+   A+ SWR L +FL+       AW LSGN  ++R LRMK E++++LATGG +LRWLQY +
Sbjct:  430 WSDYMDGRQTLQVDAVLGQVPEGLTHTHFTALTIK---NAVVDQFRAASAAGVRPSVDTEDPDLPLVIYIDNGRAMLYRGLSGSRSMHKRGYRSAMHAASLKENVAAGLLLASGWDPDTQSLCDPMCGSATLAIEAALIALRRAPGLQAMGYFSQREEGRGRGAKGGAWAPCVERWPDFDAAAWQHEVEAAAAMARDTAPTPIMANDWHEGALSLAHGDAERAGVAHCIQFFNEDARRFLPPSTPDVVVTNPPWDMRLGGAAD-SWRALRQFLKSHCGGATAWALSGNQLVTRELRMKPERSMFLATGGAQLRWLQYSI 744          
BLAST of mRNA_H-elongata_contig105193.429.1 vs. uniprot
Match: A0A0M0JYH3_9EUKA (Rrna (Guanine-n-)-methyltransferase n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JYH3_9EUKA)

HSP 1 Score: 244 bits (622), Expect = 2.990e-73
Identity = 139/294 (47.28%), Postives = 177/294 (60.20%), Query Frame = 1
Query:   70 LTHSHFTALTVKASQNAVVDQFRD-HGKRPSVDTDSPDLPLVVYLNRGRAQLYRSLSGVRSMHKRGYR--DAMHAASLKENVAAGLLLASGWDPETQTLADPMCGSGTLVIEAALIAMRRAPGLVAMGAFRNRESRGMKWSEKGRWHPAISSWPDYDAGLWQGVVEEALQAARSSPPAAIMGNDLHHGALSLAWRDAKAAGVESFIMLSDEDASRWRPPISVDLAVTNPPWDYRMDDDAERSWRDLLEFLRRELAEKNAWVLSGNPFLSRVLRMKSEQNVYLATGGIELRWLQY 942
            L HSHFTALTVK   NAV D  R+ HG RPSVD +  DLPL +Y++ G A LYR LSG  SMHKRGYR   A+HAA+L+E +AA +LL + + P  Q L DPMCGSGT+ IEAALIA   APGL+                   R  PA++ WPD     W+ +  EA +A R   P AI+ NDL  G L+LA R A AAGV + I  S  DA+ ++PP +  L +TNPPWD R++   E +WR L +FLRRE     AWVLSGN  L++ L M++   + +   G  L  + Y
Sbjct:  107 LAHSHFTALTVK---NAVCDALRERHGWRPSVDPEDADLPLFLYVHNGEASLYRVLSGGASMHKRGYRAGQAVHAAALRETLAAAMLLHAEYAPSAQVLCDPMCGSGTIPIEAALIATDTAPGLL-------------------RPPPALTRWPDTSPSTWRSLTAEAREARRPRAPCAILANDLIRGNLALAERAASAAGVATSISFSAADAAAYQPPDAPQLVLTNPPWDIRLEG-GEEAWRSLGQFLRRECGGARAWVLSGNKELTQHLHMRASSRLRIENAGSSLALISY 377          
BLAST of mRNA_H-elongata_contig105193.429.1 vs. uniprot
Match: A0A4D9D970_9STRA (THUMP domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D970_9STRA)

HSP 1 Score: 243 bits (620), Expect = 2.190e-70
Identity = 141/300 (47.00%), Postives = 188/300 (62.67%), Query Frame = 1
Query:   67 ELTHSHFTALTVKASQNAVVDQFRDH--GKRPSVDTDSPDLPLVVYLNRGRAQLYRSLSGVRSMHKRGYRDAMHAASLKENVAAGLLLASGWDPETQTLADPMCGSGTLVIEAALIAMRRAPGLVAMGAFRNRESRGMKWSEKGRWHPAISSWPDYDAGLWQGVVEEALQAARSSPPAAIMGNDLHHGALSLAWRDAKAAGVESFIMLSDEDASRWRPPISV----DLAVTNPPWDYRMDDDAERSWRDLLEFLRRELAEKNAWVLSGNPFLSRVLRMKSEQNVYLATGGIELRWLQYRL 948
            ++ H+HF++LTVK   NA+VD FR+   G+RPSVD   P LPLV++L R  A LYRSLSG  S+HKRGYR  MH +SL+E  AA +L+ +G+DPE   L DPMCGSGTL IEAAL+A R APGL+ +     RE       +     PA   WPD D  L + +V EA        P  I+GND H  A+ LA RDA +AGV   I+ S++D +  R   SV    +L V NPPWD R+++ A  SW  L  FL+RE  E  A++LSGNP ++R LRMK+++ + +   G+ LR LQY++
Sbjct:  145 DIAHTHFSSLTVK---NALVDSFRERSGGRRPSVDAKDPVLPLVLFLQRDEAWLYRSLSGPGSLHKRGYRQQMHKSSLRETTAAAVLMLAGYDPERHVLMDPMCGSGTLAIEAALMARRLAPGLMRL----KREG------DLAVLTPA--RWPDTDLALLRRLVREAKAQELERAPLPILGNDWHPAAVELAKRDAGSAGVFHDIIFSNQDVADHRLDGSVARKPNLVVCNPPWDLRLNEGARESWEALGRFLKREAGEAEAFLLSGNPDVTRALRMKAKRKIPIDQAGMSLRLLQYQV 429          
BLAST of mRNA_H-elongata_contig105193.429.1 vs. uniprot
Match: K8YNM9_NANGC (Rrna (Guanine-n-)-methyltransferase n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YNM9_NANGC)

HSP 1 Score: 243 bits (619), Expect = 9.150e-69
Identity = 141/300 (47.00%), Postives = 186/300 (62.00%), Query Frame = 1
Query:   67 ELTHSHFTALTVKASQNAVVDQFRDH--GKRPSVDTDSPDLPLVVYLNRGRAQLYRSLSGVRSMHKRGYRDAMHAASLKENVAAGLLLASGWDPETQTLADPMCGSGTLVIEAALIAMRRAPGLVAMGAFRNRESRGMKWSEKGRWHPAISSWPDYDAGLWQGVVEEALQAARSSPPAAIMGNDLHHGALSLAWRDAKAAGVESFIMLSDEDASRWRPPISV----DLAVTNPPWDYRMDDDAERSWRDLLEFLRRELAEKNAWVLSGNPFLSRVLRMKSEQNVYLATGGIELRWLQYRL 948
            ++ H+HF++LTVK   NA+VD FR+   G+RPSVD   P LPLV++L R  A LYRSLSG  S+HKRGYR  MH +SL+E  AA +L+ +G+DPE   L DPMCGSGTL IEAAL+A R APGL          +R  +  +     PA   WPD D  L + +V EA        P  I+GND H  A+ LA RDA +AGV   I+ S +DAS  R   SV    +L V NPPWD R+++ A  SW  L  FL+RE     A++LSGNP ++R LRMK+++ + +   G+ LR LQY++
Sbjct:  163 DIAHTHFSSLTVK---NALVDSFRERSGGRRPSVDAKDPVLPLVLFLQRDEAWLYRSLSGPGSLHKRGYRQQMHKSSLRETTAAAVLMLAGYDPERHVLMDPMCGSGTLAIEAALMARRLAPGL----------TRLKREGDLAVLTPA--RWPDTDLALLRRLVREAKAQELERAPLPILGNDWHPAAVELAKRDAGSAGVFHDIIFSSQDASDHRLDGSVARKPNLVVCNPPWDLRLNEGARESWEALGRFLKREAGGAEAFLLSGNPDVTRTLRMKAKRKIPIDQAGMSLRLLQYQV 447          
BLAST of mRNA_H-elongata_contig105193.429.1 vs. uniprot
Match: A0A7S4B9C2_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4B9C2_CHRCT)

HSP 1 Score: 223 bits (568), Expect = 8.420e-64
Identity = 138/302 (45.70%), Postives = 185/302 (61.26%), Query Frame = 1
Query:   70 LTHSHFTALTVKASQNAVVDQFRD-HGKRPSVDTDSPDLPLVVYLNRGRAQLYRSLSGVRSMHKRGYRD--AMHAASLKENVAAGLLLASGWDPETQTLADPMCGSGTLVIEAALIAMRRAPGLVAMGAFRNRESRGMKWSEKGRWHPAISSWPDYD-AGLWQGVVEEALQAARSSPPAAIMGNDLHHGALSLAWRDAKAAGVESFIMLSDEDASRWRPPISVDLAVTNPPWDYRMDDDAERSWRDLLEFLRRELAEKNAWVLSGNPFLSRVLRMKSEQNVYLATGGIELRWLQYRLNAYRG 963
            LTHSHFTALTVK   NAV D  R+  G RPSVDT  PD PL+++++RGR QLYR LSG+ S+HKRGYR   A+HAA+LKEN+AA +LL + +DP  Q L DPMCGSGT+ IEAALIA   APGL+                   R  P ++ W + + A  W     EA + AR+  P  I+ ND H GAL+LA R A+AAGV+  I  +  + + + P     L V+NPPW+ R+++  E +W DL  FLR E A  +A++LSGN  L+R LRM++   + +      LR ++Y +   RG
Sbjct:  208 LTHSHFTALTVK---NAVCDVVREARGWRPSVDTADPDTPLLLHVHRGRMQLYRVLSGIPSLHKRGYRADMAVHAAALKENLAAAMLLHAQYDPTMQVLCDPMCGSGTIPIEAALIATNTAPGLL-------------------RPPPPLARWRNEEYAEAWAVATAEA-EGARTLAPLPILANDKHGGALALARRSAQAAGVDHCITFTQGEVADYVPEAPPQLVVSNPPWNVRLEE-GEAAWFDLGGFLRVEAAGCSAFLLSGNAELTRRLRMRANGKLPIEQADASLRLIRYDVLPPRG 485          
BLAST of mRNA_H-elongata_contig105193.429.1 vs. uniprot
Match: A0A7Y5H9S5_9BACT (RNA methyltransferase n=1 Tax=Candidatus Brocadiae bacterium TaxID=2517210 RepID=A0A7Y5H9S5_9BACT)

HSP 1 Score: 215 bits (547), Expect = 4.770e-63
Identity = 135/321 (42.06%), Postives = 183/321 (57.01%), Query Frame = 1
Query:    1 WSRYMQQDQTLSVDAVSLKETDELTHSHFTALTVKASQNAVVDQFRDH-GKRPSVDTDSPDLPLVVYLNRGRAQLYRSLSGVRSMHKRGYRDAMHAASLKENVAAGLLLASGWDPETQTLADPMCGSGTLVIEAALIAMRRAPGLVAMGAFRNRESRGMKWSEKGRWHPAISSWPDYDAGLWQGVVEEALQAARSSPPAAIMGNDLHHGALSLAWRDAKAAGVESFIMLSDEDASRWRPPISVDLAVTNPPWDYRMDD--DAERSWRDLLEFLRRELAEKNAWVLSGNPFLSRVLRMKSEQNVYLATGGIELRWLQYRLNA 954
            W      D+T++VDA +++++D +THS + AL VK   +AVVDQ R+  G+RP VDT+SPDLPL ++L    A+LYR  SG  S+HKRG+R A+  + L E  AAGLLL + WD E+  LADPMCG GT ++EAA +AM RAPGL    AF                      WPDYD   W+ +  EA Q  +      I G DLH GA+ LA R  +AAGV   + +S  D   W P     +  TNPPW  R+ +  D   SW+ L  FL R  ++  A+VLSGN  L+R L +++ +   +  G IE RWL+Y + A
Sbjct:   84 WEALSGPDRTIAVDA-TVRDSD-MTHSQYAALVVK---DAVVDQLRERCGRRPDVDTESPDLPLRLHLRENTARLYRDWSG-ESLHKRGWRPALVKSPLNEATAAGLLLLTEWDRESP-LADPMCGGGTFLVEAAHLAMDRAPGLRRSFAFER--------------------WPDYDDRAWRALRREAEQRVKPGLRFPIEGCDLHPGAIPLARRAVEAAGVAGVVRVSQGDCRTWNPTRPPRIVCTNPPWGERIGEGEDLVASWKALGNFLHR-CSDATAFVLSGNAELTRHLGLRASRKWVVRNGPIEGRWLRYEIGA 376          
BLAST of mRNA_H-elongata_contig105193.429.1 vs. uniprot
Match: A0A7V3AFQ3_9BACT (RNA methyltransferase n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7V3AFQ3_9BACT)

HSP 1 Score: 212 bits (539), Expect = 5.080e-62
Identity = 132/317 (41.64%), Postives = 175/317 (55.21%), Query Frame = 1
Query:    1 WSRYMQQDQTLSVDAVSLKETDELTHSHFTALTVKASQNAVVDQFRDH-GKRPSVDTDSPDLPLVVYLNRGRAQLYRSLSGVRSMHKRGYRDAMHAASLKENVAAGLLLASGWDPETQTLADPMCGSGTLVIEAALIAMRRAPGLVAMGAFRNRESRGMKWSEKGRWHPAISSWPDYDAGLWQGVVEEALQAARSSPPAAIMGNDLHHGALSLAWRDAKAAGVESFIMLSDEDASRWRPPISVDLAVTNPPWDYRMDD-DAERSWRDLLEFLRRELAEKNAWVLSGNPFLSRVLRMKSEQNVYLATGGIELRWLQYR 945
            WS ++   QT S++A       ++THS + AL +K   +A+ D FR   G RP VDT+  DLPL +Y+ R  A LYR L+G  ++HKRGYRDA+H +SL E +AAG+LL + +D      ADPMCG+GT  IEAALIA RRAPGL+                   R      SWPD+D  LW+     A   AR   P AIM ND H GAL+LA +DA AAGV  +I  S+ +   + P   + L   NPPW  R+   D + +WRDL  FLR   A  N  VL+GN  L   L +   +   L TG +E   +++R
Sbjct:   85 WSAWLTVKQTFSIEARVWDS--QITHSKYAALRIK---DALCDSFRRRCGSRPDVDTERADLPLFLYIYRDEAILYRDLAGT-TLHKRGYRDALHKSSLNEALAAGILLQAAYDGRV-AFADPMCGAGTFAIEAALIAARRAPGLL-------------------RQRFPFESWPDFDRQLWKDCRGRAYGMARYEVPKAIMANDRHSGALALAAKDAAAAGVGEYIRFSEAEVGAFAPEEPLGLVCVNPPWGKRLSGPDVKTAWRDLGRFLRERCAGANVSVLTGNRDLVGELGLVPAEMRPLRTGKVECWVVRFR 375          
BLAST of mRNA_H-elongata_contig105193.429.1 vs. uniprot
Match: A0A7V8E3X5_9BACT (Putative N6-adenine-specific DNA n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7V8E3X5_9BACT)

HSP 1 Score: 207 bits (528), Expect = 3.180e-60
Identity = 131/319 (41.07%), Postives = 182/319 (57.05%), Query Frame = 1
Query:    1 WSRYMQQDQTLSVDAVSLKETDELTHSHFTALTVKASQNAVVDQFRDH-GKRPSVDTDSPDLPLVVYLNRGRAQLYRSLSGVRSMHKRGYRDAMHAASLKENVAAGLLLASGWDPETQTLADPMCGSGTLVIEAALIAMRRAPGLVAMGAFRNRESRGMKWSEKGRWHPAISSWPDYDAGLWQGVVEEALQAARSSPPAAIMGNDLHHGALSLAWRDAKAAGVESFIMLSDEDASRWRPPISVDLAVTNPPWDYRMD--DDAERSWRDLLEFLRRELAEKNAWVLSGNPFLSRVLRMKSEQNVYLATGGIELRWLQYRL 948
            W +++    TL+VDA S++++ E+THS F ALTVK   +A+VD+ RDH G+RPSVDT  PDLPL + L R  A LYR  +G  S+HKRGYR     + L E  AAG+L+ +GWD +T  LADPMCGS TL+IEAA+ A  RAPGL    AF                      W D D   W    +EA + A++  P A+MG D H GA++LA +   AA VE  + +   DA  W+P ++     TNPP+  R+   DD E SW+ L  FL R      A+VL GN  L++ L +++ +   +  G I+ R ++Y +
Sbjct:   85 WPKFLDPGFTLAVDA-SVRDS-EITHSGFAALTVK---DAIVDKLRDHFGERPSVDTQDPDLPLKLVLRRDEALLYRDWAG-ESLHKRGYRPIQVKSPLNEATAAGILMLAGWDRKTP-LADPMCGSATLLIEAAMWAAERAPGLNRRFAFER--------------------WLDLDEAAWGKERDEAKRRAKARLPFALMGADRHPGAVALARKSVVAAQVERLVTIEQADAKDWKPAVAPAAVFTNPPYGERLGEGDDLEESWKALGNFLHR-CEGATAFVLCGNSALTKFLGLRAAKKWPVMNGPIDCRLVKYEI 375          
BLAST of mRNA_H-elongata_contig105193.429.1 vs. uniprot
Match: F0Y4Q0_AURAN (THUMP domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y4Q0_AURAN)

HSP 1 Score: 207 bits (527), Expect = 4.840e-60
Identity = 133/324 (41.05%), Postives = 186/324 (57.41%), Query Frame = 1
Query:    1 WSRYMQQDQTLSVDA-VSLKETDELTHSHFTALTVKASQNAVVDQFRDH---GKRPSVDTDSPDLPLVVYLNRGRAQLYRSLSGVRSMHKRGYR-DAMHAASLKENVAAGLLLASGWDPETQT---LADPMCGSGTLVIEAALIAMRRAPGLVAMGAFRNRESRGMKWSEKGRWHPAISSWPDYDAGLWQGVVEEALQAARSSPPAAIMGNDLHHGALSLAWRDAKAAGVESFIMLSDEDASRWRPPISVDLAVTNPPWDYRMDDDAERSWRDLLEFLRRELAEKNAWVLSGNPFLSRVLRMKSEQNVYLATGGIELRWLQYRL 948
            W   M+ D TL VD  +    +  LTHSHF++LTVK   NA+VD FR     G RPSVDT + D+P+ +Y++   A+LYR+++   S+HKRGYR D  H A+L+  VAAGLL  + W  +      L DPMCGSGTL +EAAL+A   APGL+  G        G       R+  A ++W D+D   W   +  AL  A    PA I+ +D H GAL LA   A+ A V+  ++ +  DA+      + D+ V+NPPWD R+D  AE +W  L  FLRRE     A  L+GN  ++R LRM++     L +GG++LR+L+Y +
Sbjct:   83 WDALMRVDGTLRVDTTLGRAPSAALTHSHFSSLTVK---NAIVDSFRAGNRLGSRPSVDTKACDVPVHLYVDYDEARLYRAVAS-ESLHKRGYRGDVAHKAALRTTVAAGLLYLADWPAKAAAGAVLCDPMCGSGTLPVEAALMARDVAPGLIRAGF----GPAGPPSEAPLRF--ACTTWLDFDGDAWDAALGAALGRALPRAPAQILASDAHDGALRLAKDGARRASVDRDVVFARGDAATLALGATPDVVVSNPPWDGRLDG-AEEAWDALGSFLRREAPGATAHALTGNMAVTRNLRMRASSKRKLVSGGVDLRFLKYEV 395          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig105193.429.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JMT3_9PHAE3.410e-17474.16THUMP domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A836C9G3_9STRA1.620e-11760.19Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A0M0JYH3_9EUKA2.990e-7347.28Rrna (Guanine-n-)-methyltransferase n=1 Tax=Chryso... [more]
A0A4D9D970_9STRA2.190e-7047.00THUMP domain-containing protein n=2 Tax=Monodopsid... [more]
K8YNM9_NANGC9.150e-6947.00Rrna (Guanine-n-)-methyltransferase n=1 Tax=Nannoc... [more]
A0A7S4B9C2_CHRCT8.420e-6445.70Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
A0A7Y5H9S5_9BACT4.770e-6342.06RNA methyltransferase n=1 Tax=Candidatus Brocadiae... [more]
A0A7V3AFQ3_9BACT5.080e-6241.64RNA methyltransferase n=1 Tax=Planctomycetes bacte... [more]
A0A7V8E3X5_9BACT3.180e-6041.07Putative N6-adenine-specific DNA n=1 Tax=Planctomy... [more]
F0Y4Q0_AURAN4.840e-6041.05THUMP domain-containing protein (Fragment) n=1 Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig105193contigH-elongata_contig105193:3..1768 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score500.4
Seed ortholog evalue7.1e-139
Seed eggNOG ortholog2880.D7FT13
EggNOG free text desc.Putative RNA methylase family UPF0020
EggNOG OGs2QTIB@2759,COG0116@1
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons3
Model size1071
Cds size1059
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig105193.429.1prot_H-elongata_contig105193.429.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig105193 15..1768 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929584.3185306-UTR-H-elongata_contig105193:2..141622929584.3185306-UTR-H-elongata_contig105193:2..14Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig105193 3..14 +
1691679080.030277-UTR-H-elongata_contig105193:2..141691679080.030277-UTR-H-elongata_contig105193:2..14Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig105193 3..14 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929584.3343902-CDS-H-elongata_contig105193:14..1161622929584.3343902-CDS-H-elongata_contig105193:14..116Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig105193 15..116 +
1691679080.040196-CDS-H-elongata_contig105193:14..1161691679080.040196-CDS-H-elongata_contig105193:14..116Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig105193 15..116 +
1622929584.3467252-CDS-H-elongata_contig105193:525..10531622929584.3467252-CDS-H-elongata_contig105193:525..1053Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig105193 526..1053 +
1691679080.0554724-CDS-H-elongata_contig105193:525..10531691679080.0554724-CDS-H-elongata_contig105193:525..1053Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig105193 526..1053 +
1622929584.357354-CDS-H-elongata_contig105193:1339..17681622929584.357354-CDS-H-elongata_contig105193:1339..1768Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig105193 1340..1768 +
1691679080.0660074-CDS-H-elongata_contig105193:1339..17681691679080.0660074-CDS-H-elongata_contig105193:1339..1768Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig105193 1340..1768 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig105193.429.1

>prot_H-elongata_contig105193.429.1 ID=prot_H-elongata_contig105193.429.1|Name=mRNA_H-elongata_contig105193.429.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=353bp
MQQDQTLSVDAVSLKETDELTHSHFTALTVKASQNAVVDQFRDHGKRPSV
DTDSPDLPLVVYLNRGRAQLYRSLSGVRSMHKRGYRDAMHAASLKENVAA
GLLLASGWDPETQTLADPMCGSGTLVIEAALIAMRRAPGLVAMGAFRNRE
SRGMKWSEKGRWHPAISSWPDYDAGLWQGVVEEALQAARSSPPAAIMGND
LHHGALSLAWRDAKAAGVESFIMLSDEDASRWRPPISVDLAVTNPPWDYR
MDDDAERSWRDLLEFLRRELAEKNAWVLSGNPFLSRVLRMKSEQNVYLAT
GGIELRWLQYRLNAYRGDTRDDRKRASLGRRGGGSRPKKVPRLRDRPAVD
RW*
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mRNA from alignment at H-elongata_contig105193:3..1768+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig105193.429.1 ID=mRNA_H-elongata_contig105193.429.1|Name=mRNA_H-elongata_contig105193.429.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1766bp|location=Sequence derived from alignment at H-elongata_contig105193:3..1768+ (Himanthalia elongata Himel1 dioecious)
TGGTCGAGGTACATGCAGCAGGACCAGACGCTCTCGGTGGACGCCGTATC ATTAAAAGAAACAGATGAACTTACACACTCACACTTTACGGCACTCACGG TCAAGGCGAGCCAAGTCAAGCATGTCGCAAATTTCTTGCGTCGCCCTGTG GTTCTGGCACACGGGTATGGTTCTAGGCGTCTACCCCAGCTTATCTCAGT ATCCGATTAGGGTTAGGATTAGGGTTTTGACAATCTCGCTTGTAGCCCGC TGGACAGCTACGGCAACAGGGAGAAATGAGGTAAAAACATCCCCAGCGTA CGGAAACAGCTCTACCCTGCCGCACTGCTGATTCGCACGGGGTGCGAAAA TATTTGACCACTTGGATGTCTTGGATGCCTTAGATGCCTTAGATGCCTTG GGTGCCTCCCTCCACAGATAATCCCTTGGATATCTTGGATGCCTTCCCTT CCTCCCTAATATTTTATTCTTAACACGACTGGTACAGAAGGTACCGTATG TGTTTTATGTTCTTATTCCGCAGAATGCCGTTGTGGACCAATTTCGTGAC CATGGAAAGCGTCCTTCTGTGGACACCGACAGCCCCGATCTTCCCCTGGT CGTCTACCTCAACAGGGGGCGGGCGCAACTGTACCGAAGCCTCAGCGGCG TACGCTCCATGCACAAGCGAGGCTACCGGGACGCGATGCACGCGGCCTCC CTCAAGGAGAACGTCGCGGCGGGCCTTCTCCTAGCGAGCGGATGGGACCC AGAAACCCAAACCCTCGCTGACCCCATGTGCGGGTCGGGGACGCTCGTGA TCGAGGCTGCTCTCATCGCCATGCGTCGTGCCCCGGGTTTGGTAGCGATG GGGGCGTTTCGGAATAGGGAAAGCAGGGGAATGAAGTGGTCCGAGAAGGG CAGGTGGCACCCGGCAATTTCTTCGTGGCCGGACTATGATGCGGGGCTCT GGCAGGGGGTTGTTGAGGAGGCACTGCAAGCTGCACGGTCTAGCCCGCCG GCCGCAATTATGGGGAACGATTTGCACCATGGGGCGCTTTCGCTTGCTTG GGTGAGGTCGAGGTTTGACAGTTTCCAATACCTTCGCGCTCCAACGTGCT GCAAATTTAGTGTTCACTAAATCATTTATTTTAGATCCTACGTAACTCCA TCGTACAGGGCCTGTTGAGTGCATGAAGGTAACCCTGACCCTTCCACCTA TAAAAGTGCAAATAACATCCCAGTCGCGCACCAGCAATCGCTTTCCCACC TAAGTTACAAGTGTTTTCGTGTATACTGGTGCCTCGTTCTTGTGCTAAAG CCGTTCTCTGGGTCGCCGTTGTCGATTACCTACGCAGCGGGATGCCAAGG CCGCAGGCGTGGAAAGCTTTATCATGCTGTCCGACGAGGATGCGTCTCGT TGGCGACCTCCCATTTCGGTAGACCTTGCGGTGACCAATCCTCCATGGGA CTACCGAATGGACGACGATGCCGAACGGAGCTGGCGTGATCTATTGGAGT TCTTGAGGCGGGAACTGGCGGAAAAGAATGCCTGGGTGCTGTCTGGAAAC CCGTTCCTCTCAAGAGTGTTGCGAATGAAGTCAGAGCAGAATGTGTATTT GGCGACGGGCGGCATCGAGCTAAGATGGCTGCAATATCGACTAAACGCAT ACCGTGGCGATACAAGGGATGATAGGAAGAGGGCATCGCTCGGCAGACGG GGCGGCGGCTCGCGACCCAAGAAAGTTCCTCGTTTGCGTGATCGCCCGGC CGTTGACAGGTGGTGA
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Coding sequence (CDS) from alignment at H-elongata_contig105193:3..1768+

>mRNA_H-elongata_contig105193.429.1 ID=mRNA_H-elongata_contig105193.429.1|Name=mRNA_H-elongata_contig105193.429.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2118bp|location=Sequence derived from alignment at H-elongata_contig105193:3..1768+ (Himanthalia elongata Himel1 dioecious)
ATGCAGCAGGACCAGACGCTCTCGGTGGACGCCGTATCATTAAAAGAAAC
AGATGAACTTACACACTCACACTTTACGGCACTCACGGTCAAGGCGAGCC
AAATGCAGCAGGACCAGACGCTCTCGGTGGACGCCGTATCATTAAAAGAA
ACAGATGAACTTACACACTCACACTTTACGGCACTCACGGTCAAGGCGAG
CCAAAATGCCGTTGTGGACCAATTTCGTGACCATGGAAAGCGTCCTTCTG
TGGACACCGACAGCCCCGATCTTCCCCTGGTCGTCTACCTCAACAGGGGG
CGGGCGCAACTGTACCGAAGCCTCAGCGGCGTACGCTCCATGCACAAGCG
AGGCTACCGGGACGCGATGCACGCGGCCTCCCTCAAGGAGAACGTCGCGG
CGGGCCTTCTCCTAGCGAGCGGATGGGACCCAGAAACCCAAACCCTCGCT
GACCCCATGTGCGGGTCGGGGACGCTCGTGATCGAGGCTGCTCTCATCGC
CATGCGTCGTGCCCCGGGTTTGGTAGCGATGGGGGCGTTTCGGAATAGGG
AAAGCAGGGGAATGAAGTGGTCCGAGAAGGGCAGGTGGCACCCGGCAATT
TCTTCGTGGCCGGACTATGATGCGGGGCTCTGGCAGGGGGTTGTTGAGGA
GGCACTGCAAGCTGCACGGTCTAGCCCGCCGGCCGCAATTATGGGGAACG
ATTTGCACCATGGGGCGCTTTCGCTTGCTTGGAATGCCGTTGTGGACCAA
TTTCGTGACCATGGAAAGCGTCCTTCTGTGGACACCGACAGCCCCGATCT
TCCCCTGGTCGTCTACCTCAACAGGGGGCGGGCGCAACTGTACCGAAGCC
TCAGCGGCGTACGCTCCATGCACAAGCGAGGCTACCGGGACGCGATGCAC
GCGGCCTCCCTCAAGGAGAACGTCGCGGCGGGCCTTCTCCTAGCGAGCGG
ATGGGACCCAGAAACCCAAACCCTCGCTGACCCCATGTGCGGGTCGGGGA
CGCTCGTGATCGAGGCTGCTCTCATCGCCATGCGTCGTGCCCCGGGTTTG
GTAGCGATGGGGGCGTTTCGGAATAGGGAAAGCAGGGGAATGAAGTGGTC
CGAGAAGGGCAGGTGGCACCCGGCAATTTCTTCGTGGCCGGACTATGATG
CGGGGCTCTGGCAGGGGGTTGTTGAGGAGGCACTGCAAGCTGCACGGTCT
AGCCCGCCGGCCGCAATTATGGGGAACGATTTGCACCATGGGGCGCTTTC
GCTTGCTTGGCGGGATGCCAAGGCCGCAGGCGTGGAAAGCTTTATCATGC
TGTCCGACGAGGATGCGTCTCGTTGGCGACCTCCCATTTCGGTAGACCTT
GCGGTGACCAATCCTCCATGGGACTACCGAATGGACGACGATGCCGAACG
GAGCTGGCGTGATCTATTGGAGTTCTTGAGGCGGGAACTGGCGGAAAAGA
ATGCCTGGGTGCTGTCTGGAAACCCGTTCCTCTCAAGAGTGTTGCGAATG
AAGTCAGAGCAGAATGTGTATTTGGCGACGGGCGGCATCGAGCTAAGATG
GCTGCAATATCGACTAAACGCATACCGTGGCGATACAAGGGATGATAGGA
AGAGGGCATCGCTCGGCAGACGGGGCGGCGGCTCGCGACCCAAGAAAGTT
CCTCGTTTGCGTGATCGCCCGGCCGTTGACAGGTGGTGACGGGATGCCAA
GGCCGCAGGCGTGGAAAGCTTTATCATGCTGTCCGACGAGGATGCGTCTC
GTTGGCGACCTCCCATTTCGGTAGACCTTGCGGTGACCAATCCTCCATGG
GACTACCGAATGGACGACGATGCCGAACGGAGCTGGCGTGATCTATTGGA
GTTCTTGAGGCGGGAACTGGCGGAAAAGAATGCCTGGGTGCTGTCTGGAA
ACCCGTTCCTCTCAAGAGTGTTGCGAATGAAGTCAGAGCAGAATGTGTAT
TTGGCGACGGGCGGCATCGAGCTAAGATGGCTGCAATATCGACTAAACGC
ATACCGTGGCGATACAAGGGATGATAGGAAGAGGGCATCGCTCGGCAGAC
GGGGCGGCGGCTCGCGACCCAAGAAAGTTCCTCGTTTGCGTGATCGCCCG
GCCGTTGACAGGTGGTGA
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