prot_H-elongata_contig168933.4287.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig168933.4287.1
Unique Nameprot_H-elongata_contig168933.4287.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length149
Homology
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BLAST of mRNA_H-elongata_contig168933.4287.1 vs. uniprot
Match: A0A6H5L057_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L057_9PHAE)

HSP 1 Score: 146 bits (368), Expect = 1.120e-39
Identity = 77/131 (58.78%), Postives = 97/131 (74.05%), Query Frame = 0 
Query:    2 VKSKEADRLARLKRVQTEQRKSKPSGASAYSWTYFQVYTKAQYKAFALCKLCLEQQEFCRAEIKYAQSPSNLMRHLNTEFPGHRAAFDDCTRRKTG-NSSFTSSGAGAASGVTSDSTGLTGIKTYFGKDTS 131
            V  KEA+RL +LK+VQT  RKSKPSGASAY+W YF+ Y K  +KAFA+CKLC+EQ+EF R +IKY+QSPSN++ HL+T+F GH+AAF+DCT  +T    S   S AGAASG  S      GI +YF KDT+
Sbjct:  243 VSVKEAERLLKLKKVQTGVRKSKPSGASAYAWRYFEGYVKGNFKAFAVCKLCMEQKEFGREKIKYSQSPSNMLSHLHTDFAGHQAAFEDCTSSRTAAGRSLPVSAAGAASGAISGPKASAGIDSYFIKDTA 373
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig168933.4287.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L057_9PHAE1.120e-3958.78Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig168933contigH-elongata_contig168933:265..711 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig168933.4287.1mRNA_H-elongata_contig168933.4287.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig168933 265..711 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig168933.4287.1 ID=prot_H-elongata_contig168933.4287.1|Name=mRNA_H-elongata_contig168933.4287.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=149bp
QVKSKEADRLARLKRVQTEQRKSKPSGASAYSWTYFQVYTKAQYKAFALC
KLCLEQQEFCRAEIKYAQSPSNLMRHLNTEFPGHRAAFDDCTRRKTGNSS
FTSSGAGAASGVTSDSTGLTGIKTYFGKDTSTWHQCLVRWMVMNAIPFS
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