mRNA_H-elongata_contig16878.4281.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig16878.4281.1 vs. uniprot
Match: A0A6H5LB76_9PHAE (PKD domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LB76_9PHAE) HSP 1 Score: 1041 bits (2692), Expect = 0.000e+0 Identity = 511/786 (65.01%), Postives = 606/786 (77.10%), Query Frame = 1
Query: 1 YDDDCVVETYFCEKDNRLARIEVVLDEATNTVTCGTQVILINDWCTGSNHHGGGGMDFFENGDMALAVGDMSKADQVDAGDQEENTCLVEGVALPQGNFRAQLEDFNEGKLLRISADALVAEAPDTADTTGFLVRGEDFWLEAKGFRNPFRLVILPGSGNVVVADVGLNTAESFKVVPNPLEAEEGAAMGNYGWPCMEGNAWIPTDTNTWLVENKNDACDGVRGTTLGLPLEIDYDDLMDQALAGEVDWVPASYTYSSEIIDSEYPDTCASTLHSVSALHIYQGGNLPDRYSNAMLVGDYSKDCVFYFDVDAEAGTVDWTAPHVLFESRSIVDFNTDPKTGILYAIDAKISVLIKILGVGGTIGAVSTSPTVSTVPDVVLQADVTNGTVPLEVTLDASASSDSDGIVTVQWDCEGDGIFEAEGNWTAQTSKTHICTYDVDGAYQATVKTTNSLNASASDYVDILAGEAVASTMSPTPAPVAVTDSPLFTPAPVTXXXXXXXXXXXT-SPPELQWEVDNATGVRSGELEFGVVELDNFWGKTTTRGYNGQIPGPTIRMEACRSYNLTLKNMLTMPNPGGDWNTMKDPNSTNVHTHGLHISGESPADDVLFVEVRPGEQHTYVYTIPCDHAGGTFWYHPHHHGSTALQTGGGAMGVLIMEDRPDVHGIPDQYSDMPELVVAIQASLFSEMYPELIEADRDAAGGELFNTTATSRHYLVNGMVVPSIDLEAGKWLRLRISFAGQGDDHAISLQNSSD-CEMNLLAKDGVYLGEVPRVEAKLFFTPSSRL 2352
Y DDC+VE ++CEKD RLAR+EV L+EAT +VTCG Q ILINDWCTGSNHHGGGGM F NGDM L VGDMSKADQ D GDQEENTCL E LPQGNFRAQ +DFNEGKLLRIS+DALVAEA A TTGFLVR DFWLEAKGFRNPFRL + P SG+V++ADVGL++AES KVVPNPLEA E +M NYGWPC+EG+AWIP WL +N++DACD VR TTLGLPLEIDYD L +ALAG+VDWVP +Y Y ID EYP+ CA+T SVSALH+Y+GG+LP+RY N + VGDYSKDC FYFD+D G VDW PHVLFE+R+IVDF TDPKTGI+YAIDAK S+LIKI+ + G P S P +VL+AD G +PL+VT+DAS SSD++GIV ++WDCEGDG+FEAE +WT +++ H CTY VDG Y+ +V+ TN L+ +A +++LAGE A PAP XXXX SP EL+WE+++ATGV GE+E G V +DNFWG TTTR +NGQIPGPTIRMEAC++Y LT N L NPGG WNTMKDPN+TN+HTHGLHISGESPADDVL+VE+ PGE HT+VYTIPCDHAGGTFWYHPHHHGST+LQ GGGAMG L++EDR DVHGIPDQ ++MPELV+ IQ EM PEL AD DA+G EL++TTA HYLVNG V+P+I + G+W+RLR++FAG GD+HAIS++ D CEM +LAKDGVYLGEVPR+E KLFFTPSSR+
Sbjct: 144 YGDDCLVEPFWCEKDQRLARVEVNLNEATQSVTCGAQEILINDWCTGSNHHGGGGMSFLSNGDMVLTVGDMSKADQRDPGDQEENTCLREDRGLPQGNFRAQFDDFNEGKLLRISSDALVAEATADASTTGFLVRDTDFWLEAKGFRNPFRLAVSPVSGDVIIADVGLDSAESIKVVPNPLEAAETVSMPNYGWPCIEGDAWIPPYAAEWLADNESDACDDVRDTTLGLPLEIDYDALKTKALAGQVDWVPPAYVYLDGTIDEEYPEFCANTQSSVSALHVYEGGHLPERYHNRLFVGDYSKDCAFYFDIDETTGVVDWATPHVLFENRAIVDFATDPKTGIMYAIDAKFSILIKIMAIDG--------PLTSGGPTIVLEADALEGPLPLDVTIDASGSSDAEGIVLLEWDCEGDGVFEAESDWTVASARNHTCTYTVDGTYEPSVRATNGLDETAVKSLEVLAGEVAA------PAPTXXXXXXXXXXXXXXXXXXAPPVGDALESPVELEWELNDATGVFMGEIEMGAVTIDNFWGVTTTRAFNGQIPGPTIRMEACQTYELTYTNNLGPLNPGGAWNTMKDPNTTNLHTHGLHISGESPADDVLYVEITPGESHTFVYTIPCDHAGGTFWYHPHHHGSTSLQMGGGAMGALVVEDRVDVHGIPDQIANMPELVMVIQ-----EMNPELSTADSDASGDELYSTTAAQTHYLVNGQVMPTIQMTTGEWVRLRMAFAGHGDNHAISIEAPEDSCEMAVLAKDGVYLGEVPRMEPKLFFTPSSRV 910
BLAST of mRNA_H-elongata_contig16878.4281.1 vs. uniprot
Match: A0A836CK08_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK08_9STRA) HSP 1 Score: 262 bits (669), Expect = 1.790e-70 Identity = 239/825 (28.97%), Postives = 338/825 (40.97%), Query Frame = 1
Query: 34 CEKDNRLARIEVVLDEATNTVTCGTQVILINDWCTGSNHHGGGGMDFFENGDMALAVGDMSKADQVDAGDQEENTCLVEGVALPQGNFRAQLEDFNEGKLLRISADALVAEAPDTADTTGFLVRGEDFWLEAKGFRNPFRLVILPGSGNVVVADVGLN---TAESFKVVPNPLEAEEGAAMGNYGWPCMEG-------------NAW-IPTDTNT--WLVENKNDACDGVRGTTLGLPLEIDYDDLMDQALA--------GEVDWVPASYTYSSEIIDSEYPDTCASTLHSVSALHIY--QGGN------LPDRYSNAMLVGDYSKDCVFYFDVDAEAGTVDWTAP-HVLFESRSIVDFNTDPKTGILYAIDAKISVLIKILGVGGTIGAVSTSPTVSTVPDVVLQADVTNGTVPLEVTLDASASSDSDGIVTVQWDCEGDGIFEAEGNWTAQTSKTHICTYDVDGAYQATVKTTNSLNASASDYVDILAGEAVASTMSPTPAPVAVTDSPLFTPAPVTXXXXXXXXXXXTSPPELQWEVDNATGVRSGELEFGVVELDNFWGKTTTRGYNGQIPGPTIRMEACRSYNLTLKNMLT---MPNP----GGDWNTMKDPNSTNVHTHGLHISGESPADDVLFVEVRPGEQHTYVYTIPCDHAGGTFWYHPHHHGSTALQTGGGAMGVLIMEDRP-DVHGIPDQYSDMPELVVAIQASLFSEMYPELIEADRDAAGGELFNTTATSRHYLVNGMV-VPS-IDLEAGKWLRLRISFAGQGDDHAISLQNSSD----CEMNLLAKDGVYLGEVPRV--EAKLFFTPSSRL 2352
CE L R+ V L+ T T +V L+ C S+ HG G + GD+ ++VGD S+ ++D G + C V G QG FRAQ EDF GK+ RI A L A A + T + A G R PFR+ + + D G T E + + A+ NYGWPC+EG W P++ +L + CDG++ L QALA ++ W P +Y Y +D +PD C L +++++ I G N LP Y+ ++ D+ K C ++FD D G D + P HV+ + +VD P Y ID + L+++ + +A++ D I A+T K T +P P P A T + PELQW N G G L VV L+ G TR +NG IPGP +RM+ C +Y+LT+KN L P P N++ DP TNVH HGLH+SGE+P DDV V + PG+ Y YTIPCDHA GT WYHPHHHGS ALQTGGGA G+L++E + G P + + +PE V IQ E+ P + +VNG P+ + +EAG+W +L I G + +L ++D C++ LL KDG + + PR + KLF + SSR+
Sbjct: 119 CEHPYYLDRVAVDLEAGTMT----KEVTLLQVACGSSSSHGPGTV-LSIGGDLLVSVGDGSQYAELDPGFDVDG-CYVPGAGDDQGVFRAQREDFGNGKVHRIPAALLNAPAAIALEATSPV---------AIGLRQPFRMFYHAPGDTLWIGDTGFGDGGTTERIYGLNDASAPVLSTAVPNYGWPCIEGVFANTADALAGKYTLWDTPSEQERLRYLEDRGLTRCDGIK--------------LAAQALADGTAPPDDADLMWRPPTYEYRVGALDPNHPDDCGGGLAAITSVFISATNGANNSSSSGLPADYTGKLIFADHVKQCTWFFDADPATGAPDTSVPPHVITANLGLVDIVAGPGGTGAYGIDFANARLVRMASL-------------------------------------TAAAAPRDAIAAPIGXXXXXXXXXXXXXXAAKTVKP---------------------------------------TKTPKPIPAAKT------------------CRNPRNFPELQW-TRNDDGSYEGTLTLDVVMLETERGAVRTRAWNGMIPGPLMRMQPCGTYHLTVKNALKGWPAPPPRIAAAAQLNSVHDPLVTNVHVHGLHVSGEAPGDDVFGV-IEPGDAAMYTYTIPCDHASGTNWYHPHHHGSVALQTGGGAAGMLVIEPSAREALGTPAEIAALPEQFVVIQ-----EIDPAXXXXXXXXXXXXXXDVPPL---LMVNGCADAPAQMRVEAGQWTKLHILNVGVAYNAVATLVAAADGVAACDVVLLGKDGAPVADAPRALPDRKLFLSVSSRV 810
BLAST of mRNA_H-elongata_contig16878.4281.1 vs. uniprot
Match: A0A835ZH56_9STRA (CBM6 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZH56_9STRA) HSP 1 Score: 238 bits (607), Expect = 7.420e-63 Identity = 194/666 (29.13%), Postives = 278/666 (41.74%), Query Frame = 1
Query: 487 VADVGLN---TAESFKVVPNPLEAEEGAAMG-NYGWPCMEG----------NAWIPTDTNT------WLVENKNDACDGVRGTTLGLPLEIDYDDLMDQALAGEVDWVPASYTYSSEIIDSEYPDTCASTLHSVSALHIYQGGNLPDRYSNAMLVGDYSKDCVFYFDVDAEAGTVDWTAP----HVLFESRSIVDFNTDPKTGILYAIDAKISVLIKILGVGGTIGAVSTSPTVSTVPDVVLQADVTNGTVPLEVTLDASASSDSDGIVTVQWDCEGDGIFEAEGNWTAQTSKTHICTYDVDGAYQATVKTTNSLNASASDYVDILAGEAVASTMSPTPAPVAVTDSPLFTPAPVTXXXXXXXXXXXTSPPELQWEVDNATGVRSGELEFGVVELDNFWGKTTTRGYNGQIPGPTIRMEACRSYNLTLKNMLT-MPN---PGGDWNTMKDPNSTNVHTHGLHISGESPADDVLFVEVRPGEQHTYVYTIPCDHAGGTFWYHPHHHGSTALQTGGGAMGVLIMEDRP-DVHGIPDQYSDMPELVVAIQASLFSEMYPELIEADRDAAGGELFNTTATSRHYLVNGMVVPSIDL--EAGKWLRLRISFAGQGDDHAISLQNS-----------SDCEMNLLAKDGVYLGEVPRV--EAKLFFTPSSRL 2352
+ DVG T E V + + G N+GWPC+EG + P DT++ ++ N D CDGV DY + W + Y ++D +YP C + +++++H+Y+G ++P Y+ +++ DY+K CV+YFD + GT + AP HVL VD P G LY +D + ++++ A S G+ DG E P V V D F P + PE QW A G +G LEFG VE+ G T GYNG PGP +RM+AC Y+LTLKN L P P N DP TN+H HG+HISG +P DDV F + GE+ YVYT+PCDH GGT WYHPHHHG ALQ+G GAMG+LI+E P + +P + MPE + IQ E+ P ++ DAA +LF T LVNG +++ EAG+W+R+ I + A++++ + + C++ LL KDGV++ + PR + +F + SSRL
Sbjct: 12 ITDVGFGDGGTTERLFVATDVSKHVPGVTQPFNWGWPCIEGLFSTVDDEVAGNFNPLDTDSEQQRQAYVRTNNLDVCDGVYNAVQ------DYVAGDAPGPLSDATWRAPVFEYRVGLLDPDYPGLCTYSNAAITSVHVYEGADMPAAYTGKLIIADYAKQCVWYFD--NKPGTKEPDAPGSYPHVLLAGTGCVDTAEGPD-GALYCVDLLNNRILRMY---------------------------------------AKGEGPSKGL---------DGPTEPXXXXXXXXXXXX-------------------------------------------PDNVVVADQ-CFDPK---------------NMPEFQW-ARQADGSYAGVLEFGAVEIATATGTMRTVGYNGLQPGPIMRMQACGVYHLTLKNTLEGWPEGIGPEAGVNGEHDPTVTNIHLHGMHISGMAPGDDV-FAAIAAGEEQEYVYTVPCDHTGGTNWYHPHHHGIVALQSGTGAMGMLIVESNPREAQDMPPEIQMMPEQFIVIQ-----EIDPIALQTYADAAKDQLFQTDIAQAFTLVNGCDAGDVEMTVEAGQWVRVHILNHANAFNSALTIKAAVAGAAPAAPAAAQCDVLLLGKDGVWVADAPRAVPDNNMFVSISSRL 554
BLAST of mRNA_H-elongata_contig16878.4281.1 vs. uniprot
Match: A0A835Z3E9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3E9_9STRA) HSP 1 Score: 232 bits (592), Expect = 1.990e-60 Identity = 130/282 (46.10%), Postives = 168/282 (59.57%), Query Frame = 1
Query: 1531 LQWEVDNATGVRSGELEFGVVELDNFWGKTTTRGYNGQIPGPTIRMEACRSYNLTLKNMLT-MPNPGGDW-NTMKDPNSTNVHTHGLHISGESPADDVLFVEVRPGEQHTYVYTIPCDHAGGTFWYHPHHHGSTALQTGGGAMGVLIMEDRPDVHGI---PDQYSDMPELVVAIQASLFSEMYPELIEADRDAAGGELFNTTATSRHYLVNGMVVPSIDLEAGKWLRLRISFAGQGDDHAISLQNSSD---CEMNLLAKDGVYLGEVPRVEAKLFFTPSSRL 2352
L W NA G S LEFG ++ N +G T TRGYNG IPGP +R++AC+ Y LTLKN L+ +P N +P++TN+HTHGLH+SG AD+VL EV GE Y Y IPCDHAGGT +YH HHHG LQ GGGA+G+L ++D P I P Y MP V +Q + P+ ++ A G +LF TTAT++HYL NG ++ + GKW RLR+ G+ D+ +S+QN C M LLAKDGVY V LFF+ SSR+
Sbjct: 684 LAWTT-NADGTLSATLEFGAIQFTNKYGTTRTRGYNGGIPGPLMRLQACKVYKLTLKNTLSGWADPTSPTLNQFTNPSTTNLHTHGLHVSGMGNADNVLR-EVARGESAVYTYAIPCDHAGGTHFYHAHHHGGVTLQAGGGAVGLLRVDDNPTFEAIASRPAIYGSMPTRYVVLQY-----VDPDTLQTTAAAMGDDLFYTTATAKHYLTNGCDDYTMSITLGKWTRLRMLHVGRLDNALVSIQNQGGGDPCIMALLAKDGVYDSAPGTVYTNLFFSISSRV 958
BLAST of mRNA_H-elongata_contig16878.4281.1 vs. uniprot
Match: A0A835YZ52_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZ52_9STRA) HSP 1 Score: 217 bits (552), Expect = 2.890e-55 Identity = 126/300 (42.00%), Postives = 165/300 (55.00%), Query Frame = 1
Query: 1525 PELQWEVDNATGVRSGELEFGVVELDNFWGKTTTRGYNGQIPGPTIRMEACRSYNLTLKN-MLTMPNPGGDWNTMKDPNSTNVHTHGLHISGESPADDVLFVEVRPGEQHTYVYTIPCDHAGGTFWYHPHHHGSTALQTGGGAMGVLIMEDRPDVHGI---PDQYSDMPELVVAIQASLFSEMYPELIEADRDAAGGE----------------LFNTTATSRHYLVNGMVVPSIDLEAGKWLRLRISFAGQGDDHAISLQNSSD---CEMNLLAKDGVYLGEVPRV-EAKLFFTPSSRL 2352
PEL+W GV L G V+ N WG T TRGYNG +P P +R+ AC Y LTL+N NPGG N ++P +TN+HTHGLH+SG ADD + EV PG++ Y Y IPCDHAGGT +YHPHHHGS L G GA+G+L ++D P + P Y MP+ +A Q F + P ++A D G + LF TTA +HYL NG + + GKW RLR+ G G D +SL C++ +LAKDG+Y V RV A+ +F+ SSR+
Sbjct: 575 PELKW-TQGKDGVFRATLTLGAVQFANKWGTTRTRGYNGGVPAPLMRLRACGVYKLTLRNAQQKWGNPGGALNDFREPATTNLHTHGLHVSGIGNADDT-YREVLPGKETVYTYAIPCDHAGGTHFYHPHHHGSVFLSAGAGAVGMLRVDDNPTLEANARRPAIYGRMPQRYLAFQ---FFD--PSRLKALADGMGDQARHPAAPLRLNALAKGLFYTTAKRKHYLTNGCTGYTNSITIGKWTRLRMLHIGHGADAVVSLVREGGGKTCKVAMLAKDGIYSDTVGRVVPAQFYFSVSSRV 867
BLAST of mRNA_H-elongata_contig16878.4281.1 vs. uniprot
Match: A0A836CIZ3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIZ3_9STRA) HSP 1 Score: 203 bits (517), Expect = 6.800e-51 Identity = 110/273 (40.29%), Postives = 158/273 (57.88%), Query Frame = 1
Query: 1558 GVRSGELEFGVVELDNFWGKTTTRGYNGQIPGPTIRMEACRSYNLTLKNMLTMP--NPGGDWNTMKDPNSTNVHTHGLHISGESPADDVLFVEVRPGEQHTYVYTIPCDHAGGTFWYHPHHHGSTALQTGGGAMGVLIMEDRPDVHG-IPDQYSDMPELVVAIQASLFSEMYPELIEADRDAAGGELFNTTATSRHYLVNGMVVPSIDLEAGKWLRLRISFAGQGDDHAISL----QNSSDCEMNLLAKDGVYLGEVPRVEA--KLFFTPSSR 2349
G + L F VVE N +G T TR +N + PTIRM+AC Y +TL N L +P G NT++DP TN+H HGLHISG D+V+ V++ PG H Y Y IPCDHA G +YH HHHGS ++Q GGGA+G++++ED P G +P + MPE + I+ + PE + ++ +TAT HYL+N S+ AG+W RLR+ G + + + +++ C + L+AKDGVY+ VPR A ++FF+ +SR
Sbjct: 577 GYKCANLSFDVVEYTNSYGTTRTRAFN--LYNPTIRMKACGKYLITLTNDLAAGWGDPTGAINTLRDPQRTNLHVHGLHISGNGAVDNVVDVQLSPGGGHLYKYEIPCDHASGLHFYHTHHHGSASVQAGGGAVGLIVIEDNPQFEGTLPGWLNGMPERHLLIEV-----VEPEAVRGYAKDMSDTVYTSTATKDHYLINKCTSVSVTAPAGRWTRLRMLHVGGALNAKMRIGGGGSSAAACAVGLVAKDGVYVSHVPRALATREVFFSVASR 842
BLAST of mRNA_H-elongata_contig16878.4281.1 vs. uniprot
Match: A0A835ZCB5_9STRA (CBM6 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCB5_9STRA) HSP 1 Score: 201 bits (512), Expect = 3.140e-50 Identity = 126/303 (41.58%), Postives = 168/303 (55.45%), Query Frame = 1
Query: 1525 PELQWEVDNATGVRSGELEFGVVELDNFWGKTT-TRGYNGQIPGPTIRMEACRSYNLTLKNMLTMPNPG----GDWNTMKDPNSTNVHTHGLHISGESPADDVLFVEVRPGEQHTYVYTIPCDHAGGTFWYHPHHHGSTALQTGGGAMGVLIMEDRPDVHGI-PDQYSDMPELVVAIQASLFSEMYPELIEADRDAAGGELFNTTATSRHYLVNGMVVP---------------SIDLEAGKWLRLRISFAGQGDDHAISLQ----NSSDCEMNLLAKDGVYLGEVPRVEA--KLFFTPSSRL 2352
PEL W A G + +L GVV L G T TR +NG IPGP IRM+AC+ Y LT++N L G G N P TN+HTHGLHISGESPAD+ FV + PG+++TY Y IPCDH GG WYHPH HG+ ALQT GGA G++++E + P MPE + IQ E+ P ++A +G +F++ T+ LVNG P +I++EAG+W RLR+ G + I+++ N C++ LLAKDGV L + PR A LF + S+RL
Sbjct: 388 PELGW-THQADGTFTADLTLGVVTLTTADGGTLRTRAWNGLIPGPIIRMKACQVYYLTVRNDLGAWPEGKPETGVMNGFHGPTVTNIHTHGLHISGESPADNP-FVSILPGQEYTYQYRIPCDHIGGLHWYHPHKHGAVALQTHGGAAGLIVIEPMAREASVTPAAIQTMPEQYLMIQ-----EIDPPGLQAFATQSGDRIFDSDITAAFTLVNGCSAPGAGVVVKPAMTTALANINVEAGQWTRLRLLNVGHQYNSIITIEPKVLNGVPCQLGLLAKDGVPLADAPRAVAGNALFVSLSTRL 683
BLAST of mRNA_H-elongata_contig16878.4281.1 vs. uniprot
Match: A0A835Z524_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z524_9STRA) HSP 1 Score: 201 bits (511), Expect = 4.100e-50 Identity = 122/311 (39.23%), Postives = 160/311 (51.45%), Query Frame = 1
Query: 1531 LQWEVDNATGVRSGELEFGVVELDNFWGKTTTRG---------------------------YNGQIPGPTIRMEACRSYNLTLKNMLT-MPNPGGDWNTMKDPNSTNVHTHGLHISGESPADDVLFVEVRPGEQHTYVYTIPCDHAGGTFWYHPHHHGSTALQTGGGAMGVLIMEDRPDVH---GIPDQYSDMPELVVAIQASLFSEMYPELIEADRDAAGGELFNTTATSRHYLVNGMVVPSIDLEAGKWLRLRISFAGQGDDHAISLQ----NSSDCEMNLLAKDGVYLGEVPRV--EAKLFFTPSSRL 2352
L W A GV L+F ++ N G T TRG YNG IPGP IRM+AC++Y +TL+N L N G NTM P +TN+HTHGLHISG AD+V E+ PG Y IPCDHAGGT +YHPHHHGS LQ GGA G+L ++D P P Y MP + +F ++P + A +LF +TAT RHYL NG + + GKW RLR+ G+ D+ S+ C++ L+AKDGVY E R+ + ++FF+ SSR+
Sbjct: 572 LAW-TQGADGVLRARLDFEPIQFTNKQGTTRTRGRRRTXXXXXXXXXXXXXXXXXXXXXXXYNGHIPGPIIRMQACKTYQITLRNGLAGWANVPGAENTMHSPQTTNLHTHGLHISGMGTADNVAR-EMLPGSDTVITYAIPCDHAGGTHFYHPHHHGSVTLQAFGGAAGILQIDDNPAFEIGDHRPAIYGQMPNKYL-----IFQYVHPAFLNERASAMKDDLFASTATERHYLTNGCADYTTGVTLGKWTRLRMLHIGRKDNAIASITARDGGKGACKVALIAKDGVYDNEAGRILADGRVFFSISSRV 875
BLAST of mRNA_H-elongata_contig16878.4281.1 vs. uniprot
Match: A0A835Z7H4_9STRA (Uncharacterized protein (Fragment) n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7H4_9STRA) HSP 1 Score: 196 bits (499), Expect = 1.010e-49 Identity = 118/291 (40.55%), Postives = 161/291 (55.33%), Query Frame = 1
Query: 1525 PELQWEVDNATGVRSGELEFGVVELDNFWGKTTTRGYNGQIPGPTIRMEACRSYNLTLKNMLTMPNPG--GDWNTMKDPNSTNVHTHGLHISGESPADDVLFVEVRPGEQHTYVYTIPCDHAGGTFWYHPHHHGSTALQTGGGAMGVLIMEDRP-DVHGIPDQYSDMPELVVAIQASLFSEMYP----ELIEADRDAAGGELFNTTATSRHYLVNGMVVPSIDLEAGKWLRLRISFAGQGDDHAISLQ-----NSSDCEMNLLAKDGVYLGEVPR---VEAKLFFTPSSRL 2352
PEL W ++ G +L FG E + TR YNG +PGP IRM+ACR+Y +T+ NML G G + DP TN+H HGLH+SG++P+DDVL V ++PG TY Y IPCDHAGGT WYHPH GSTALQ GGA G++I+E + P Y +PE ++ +Q E+ P EL E + AA +L T +R NGM V +EA W R+RI + +++ + C + LLAKDGV++ +PR E +F + SSR+
Sbjct: 2 PELPWVRNDYAGTYDADLFFGAGEEGTPYVLIRTRAYNGMVPGPLIRMKACRNYRITVHNMLAEYPVGKTGTGSGQYDPTWTNLHLHGLHVSGDAPSDDVLTVNIQPGLSFTYTYRIPCDHAGGTNWYHPHKRGSTALQADGGAAGMVIIEGSVREAANTPVAYGTVPEHMLVVQ-----EIVPYGANELAE-NAAAAEDQLLTVTTNTRASYWNGMTVK---VEANLWQRVRILNVATTYNTVLTITPVNPVGGAPCSVVLLAKDGVFVASLPRSVPAEQSIFLSLSSRV 283
BLAST of mRNA_H-elongata_contig16878.4281.1 vs. uniprot
Match: A0A835YUJ5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUJ5_9STRA) HSP 1 Score: 192 bits (489), Expect = 7.050e-48 Identity = 113/280 (40.36%), Postives = 156/280 (55.71%), Query Frame = 1
Query: 1525 PELQWEVDNATGVRSGELEFGVVELDNFWGKTTTRGYNGQIPGPTIRMEACRSYNLTLKNMLTMPNPG------GDWNTMKDPNSTNVHTHGLHISGESPADDVLFVEVRPGEQHTYVYTIPCDHAGGTFWYHPHHHGSTALQTGGGAMGVLIMEDRP-DVHGIPDQYSDMPELVVAIQASLFSEMYPELIEADRDAAGGELFNTTATSRHY-LVNGM----VVPSIDLEAGKWLRLRISFAGQGDDHAISL----QNSSDCEMNLLAKDGVYLGEVPRV 2316
PEL+W + A G SG LE VE+ G TRG+NG +PGP IRM+AC +Y L L N G G N DP TN+H HGLHISG +P D + + + GE + Y YTIPC+HA GTFWYHPH HGSTALQ GGA G+LI+E P + P Y+ MPE ++ +Q ++ +L+ +G LF+ + + + +VNG + L AG+W +LR+ G + +S+ + C++ LLAKDGV+L + PRV
Sbjct: 298 PELEW-TEQADGSFSGTLELSAVEMVKGGGTIVTRGFNGMVPGPVIRMQACNTYKLRLVNDQAGWPAGLNADQIGGVNGFHDPTVTNLHLHGLHISGMAPGDSMDTL-LEAGEMNVYTYTIPCEHASGTFWYHPHGHGSTALQADGGAAGMLIVEGAPRESAKFPPAYNAMPEQLLVVQ-----DINTDLLGRLAGYSGDSLFSKSPMMKPFTMVNGCDPADAPADVALAAGQWTKLRMLNVGTQYNSVLSIVPAVPAADPCDVQLLAKDGVWLSDAPRV 570 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig16878.4281.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig16878.4281.1 >prot_H-elongata_contig16878.4281.1 ID=prot_H-elongata_contig16878.4281.1|Name=mRNA_H-elongata_contig16878.4281.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=784bp YDDDCVVETYFCEKDNRLARIEVVLDEATNTVTCGTQVILINDWCTGSNHback to top mRNA from alignment at H-elongata_contig16878:322..7145+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig16878.4281.1 ID=mRNA_H-elongata_contig16878.4281.1|Name=mRNA_H-elongata_contig16878.4281.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=6824bp|location=Sequence derived from alignment at H-elongata_contig16878:322..7145+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig16878:322..7145+ >mRNA_H-elongata_contig16878.4281.1 ID=mRNA_H-elongata_contig16878.4281.1|Name=mRNA_H-elongata_contig16878.4281.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=4704bp|location=Sequence derived from alignment at H-elongata_contig16878:322..7145+ (Himanthalia elongata Himel1 dioecious)back to top |