prot_H-elongata_contig16830.4258.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig16830.4258.1
Unique Nameprot_H-elongata_contig16830.4258.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length1045
Homology
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BLAST of mRNA_H-elongata_contig16830.4258.1 vs. uniprot
Match: D7FGV5_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGV5_ECTSI)

HSP 1 Score: 94.0 bits (232), Expect = 1.220e-15
Identity = 44/60 (73.33%), Postives = 51/60 (85.00%), Query Frame = 0 
Query:  984 GDPDAVDPTSDEFWRNADDGQVYSLLRDPDPDTPRLVKLALVQGSAGKRLRAGLLNYYKK 1043
            GDPDAV+P S++FWRNADD QVYSLL  P  DTPRLV+LAL+QGSAG+R+  GL NYYKK
Sbjct:  501 GDPDAVNPGSEDFWRNADDEQVYSLLSAPTADTPRLVELALLQGSAGQRMAQGLANYYKK 560
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig16830.4258.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FGV5_ECTSI1.220e-1573.33Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig16830contigH-elongata_contig16830:2567..6863 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig16830.4258.1mRNA_H-elongata_contig16830.4258.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig16830 2567..6863 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig16830.4258.1 ID=prot_H-elongata_contig16830.4258.1|Name=mRNA_H-elongata_contig16830.4258.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=1045bp
MFGSGKIGAPAPAPTPSTGSTPFSFGSSQPASSNPGGFSFGSSGSSARAF
PSAPSASASAGFGALATAPAASAAPAPAFSFGASATPSSAATSSTPPVFG
GFGAGVAPPSAVAPATSSLSTPSIFGGFGAGVASPASTAPATTSSSTPSI
FGGFGAGIASPASAAPATTSSSTPSIFGGFGVGVASPAIAAPATTSSSTS
SIFGGFSAGIAPPAAAPVTGFGFGGFGSGSVSAAKDAATSGPAPSPASVF
GKDSGITGGGFNFSTTPASAGSGRSIFGGGATGGGDRAKTPAAAPTPAPA
STGFSFGTTASTGASSISGTGSHVTSGFGASLGAANASSGASSTFAPSGG
FKGLTGAGAVSSGKPFSFSGSATSAATAPASAASHHSSTLLLPLPLHAIS
ATTSLTGFSFGASSTPSTSSATSTAPATGSAFSFATPVTPIPSFTLSSAS
ASAPTAGTAAAASATGSGAQPKPVATTQPLSWGSSTSAALATAPANTAQA
PSLFGTQTGEAFGSGGAGSAGGDVGGGFRSVLTSASASSTTGAPEAFSFK
GGSAGVKPGSGFLLGTTSSTNSPAPSASLSAPTTSGTASGAFQFGVTSAT
MTASSSAAPASTSAASAAAASPSAGSFGFGPSAFAPAAATSTSTTTSSST
AVAALAATTAATPAATPLTFGLGAPATSTAAAGTLSSGVFGFGTSMAPTP
AAVTTTSSAPTTASPAVAGQTTAKLSFFGVGAPSAATSAATPVATLASVP
ATSAPASTAGFSFGMPLSTAAEANAPAALKVLTSTVPVPALAPTSTASGA
GSVGGMAPTSATSTGAPFGLGTPAESSLSSIPVAPVPPAPAASAVAAVPA
PAAGIPAPVVDTASAPPSDTFSFGASTPAPAPAPGTTGSVAAATAASAAQ
STANQALGTTGTATAFPLDTTSTGNSTAEGGGFNFGAVAPVDSGASGGGD
GGVSTPAAPVPAAGTAASAPAVVAPSAFTPASAGDPDAVDPTSDEFWRNA
DDGQVYSLLRDPDPDTPRLVKLALVQGSAGKRLRAGLLNYYKKV*
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