prot_H-elongata_contig168206.4255.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig168206.4255.1
Unique Nameprot_H-elongata_contig168206.4255.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length100
Homology
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BLAST of mRNA_H-elongata_contig168206.4255.1 vs. uniprot
Match: D8LQ04_ECTSI (USP7_ICP0_bdg domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ04_ECTSI)

HSP 1 Score: 175 bits (443), Expect = 3.850e-49
Identity = 81/105 (77.14%), Postives = 92/105 (87.62%), Query Frame = 0 
Query:    1 MSVKIMDVREAYFRVATDTDLARNITGQSGGGDFADWRTCLPAKAFKHDQLLYVIQKVAELTGVPLVSCRPWLCLPHAG-----GAIRPVAALLPQHLPMTICEV 100
            +SVKI+DVREAYFRVATD DLAR++TG+ GGGDFADWRTCLPAK+FKHDQLLYVIQKV+ELTGVPLVSCRPWLC+P        G +RP AALLPQHL M+ICE+
Sbjct:   16 ISVKIIDVREAYFRVATDVDLARSVTGRGGGGDFADWRTCLPAKSFKHDQLLYVIQKVSELTGVPLVSCRPWLCMPRKNRNGPPGPLRPAAALLPQHLQMSICEI 120
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig168206.4255.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LQ04_ECTSI3.850e-4977.14USP7_ICP0_bdg domain-containing protein n=1 Tax=Ec... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig168206contigH-elongata_contig168206:663..1294 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig168206.4255.1mRNA_H-elongata_contig168206.4255.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig168206 651..1294 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig168206.4255.1 ID=prot_H-elongata_contig168206.4255.1|Name=mRNA_H-elongata_contig168206.4255.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=100bp
MSVKIMDVREAYFRVATDTDLARNITGQSGGGDFADWRTCLPAKAFKHDQ
LLYVIQKVAELTGVPLVSCRPWLCLPHAGGAIRPVAALLPQHLPMTICEV
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