prot_H-elongata_contig168184.4252.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig168184.4252.1
Unique Nameprot_H-elongata_contig168184.4252.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length109
Homology
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BLAST of mRNA_H-elongata_contig168184.4252.1 vs. uniprot
Match: D8LQT1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQT1_ECTSI)

HSP 1 Score: 133 bits (334), Expect = 1.370e-35
Identity = 73/104 (70.19%), Postives = 83/104 (79.81%), Query Frame = 0 
Query:    5 QALLSASGETRPLAGIIRKVQGHEKELLTVTAAHHLESMREARALGMGAGMTAHRGN-GGAPMASPAQDRLLGEGVRELRRRANGEAAAVTELLEELRYEADGL 107
            +A L    ET+ LAGIIR+VQ HE+E LTVTAAHHLESMREARALGMG GM+ H G  G A  ASP+QDRLL + V +L RRA GEAAAV+ELLEELRYEA+GL
Sbjct:  238 EATLGKDSETKALAGIIRRVQEHEREKLTVTAAHHLESMREARALGMGPGMSVHSGGQGDAGAASPSQDRLLSDAVGDLLRRAEGEAAAVSELLEELRYEAEGL 341
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig168184.4252.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LQT1_ECTSI1.370e-3570.19Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 79..99

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig168184contigH-elongata_contig168184:232..1168 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig168184.4252.1mRNA_H-elongata_contig168184.4252.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig168184 232..1168 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig168184.4252.1 ID=prot_H-elongata_contig168184.4252.1|Name=mRNA_H-elongata_contig168184.4252.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=109bp
IDRRQALLSASGETRPLAGIIRKVQGHEKELLTVTAAHHLESMREARALG
MGAGMTAHRGNGGAPMASPAQDRLLGEGVRELRRRANGEAAAVTELLEEL
RYEADGLL*
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