prot_H-elongata_contig168182.4251.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig168182.4251.1
Unique Nameprot_H-elongata_contig168182.4251.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length54
Homology
BLAST of mRNA_H-elongata_contig168182.4251.1 vs. uniprot
Match: A0A6H5KQA3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQA3_9PHAE)

HSP 1 Score: 92.4 bits (228), Expect = 1.470e-20
Identity = 44/54 (81.48%), Postives = 50/54 (92.59%), Query Frame = 0
Query:    1 FQGYVHVRTDRKSLVVPVDLHVSTGGVEATPSEVDFGVLTSSLERRQASISLFN 54
            FQGYVH+RTD +S+VVPV+LHVS GGV+ TP EVDFGVLTSSLERRQAS+SLFN
Sbjct:  491 FQGYVHIRTDGESMVVPVELHVSKGGVDPTPLEVDFGVLTSSLERRQASVSLFN 544          
BLAST of mRNA_H-elongata_contig168182.4251.1 vs. uniprot
Match: D8LB05_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB05_ECTSI)

HSP 1 Score: 88.2 bits (217), Expect = 4.540e-19
Identity = 41/54 (75.93%), Postives = 50/54 (92.59%), Query Frame = 0
Query:    1 FQGYVHVRTDRKSLVVPVDLHVSTGGVEATPSEVDFGVLTSSLERRQASISLFN 54
            F+GYVH+RTD +S+VVPV+LHVS GGV+ +P EVDFGVLTSSLERRQAS+SL+N
Sbjct:  401 FRGYVHIRTDGESMVVPVELHVSKGGVDPSPLEVDFGVLTSSLERRQASVSLYN 454          
BLAST of mRNA_H-elongata_contig168182.4251.1 vs. uniprot
Match: A0A7S2SPF7_9STRA (Hypothetical protein (Fragment) n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SPF7_9STRA)

HSP 1 Score: 64.3 bits (155), Expect = 1.140e-10
Identity = 30/52 (57.69%), Postives = 38/52 (73.08%), Query Frame = 0
Query:    3 GYVHVRTDRKSLVVPVDLHVSTGGVEATPSEVDFGVLTSSLERRQASISLFN 54
            GYVHV+TDR  +VVPV++ V  GG+  +P E+DFG+LTS  E R   ISLFN
Sbjct:   12 GYVHVKTDRDRMVVPVEVEVLQGGLHPSPKELDFGILTSPEEHRTIPISLFN 63          
BLAST of mRNA_H-elongata_contig168182.4251.1 vs. uniprot
Match: A0A7S1RDK5_ALECA (Hypothetical protein (Fragment) n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1RDK5_ALECA)

HSP 1 Score: 52.0 bits (123), Expect = 6.060e-7
Identity = 24/54 (44.44%), Postives = 37/54 (68.52%), Query Frame = 0
Query:    1 FQGYVHVRTDRKSLVVPVDLHVSTGGVEATPSEVDFGVLTSSLERRQASISLFN 54
            F+G+VHV+ D+ SL+VPV++ V+ GGV  +P  VDF  L S L+ R   +++ N
Sbjct:   39 FRGFVHVKADQDSLLVPVEVLVTRGGVHVSPELVDFQTLVSPLQARSLWLTITN 92          
BLAST of mRNA_H-elongata_contig168182.4251.1 vs. uniprot
Match: A0A7S0W822_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0W822_9CRYP)

HSP 1 Score: 46.2 bits (108), Expect = 9.940e-5
Identity = 22/52 (42.31%), Postives = 31/52 (59.62%), Query Frame = 0
Query:    3 GYVHVRTDRKSLVVPVDLHVSTGGVEATPSEVDFGVLTSSLERRQASISLFN 54
            GYVHVRTDR  LV+PV+L V  GG+     E+ F  +    +++   I+L N
Sbjct:   31 GYVHVRTDRDDLVIPVELSVMKGGLHTAQPEMVFDTIIIPGQKKDLPIALLN 82          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig168182.4251.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5KQA3_9PHAE1.470e-2081.48Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LB05_ECTSI4.540e-1975.93Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2SPF7_9STRA1.140e-1057.69Hypothetical protein (Fragment) n=2 Tax=Rhizochrom... [more]
A0A7S1RDK5_ALECA6.060e-744.44Hypothetical protein (Fragment) n=1 Tax=Alexandriu... [more]
A0A7S0W822_9CRYP9.940e-542.31Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig168182contigH-elongata_contig168182:792..953 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig168182.4251.1mRNA_H-elongata_contig168182.4251.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig168182 792..953 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig168182.4251.1 ID=prot_H-elongata_contig168182.4251.1|Name=mRNA_H-elongata_contig168182.4251.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=54bp
FQGYVHVRTDRKSLVVPVDLHVSTGGVEATPSEVDFGVLTSSLERRQASI
SLFN
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