prot_H-elongata_contig16816.4250.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig16816.4250.1
Unique Nameprot_H-elongata_contig16816.4250.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length1161
Homology
BLAST of mRNA_H-elongata_contig16816.4250.1 vs. uniprot
Match: A0A6H5LQT4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LQT4_9PHAE)

HSP 1 Score: 231 bits (588), Expect = 1.290e-59
Identity = 222/715 (31.05%), Postives = 299/715 (41.82%), Query Frame = 0
Query:  177 LSALARGLAIRSVVDACCKNMPPLPDRSRGAKRFLEQWDRSSRVQRERVLKALTDHLLVGDVRCGSISTSQSGLVKGGSLGNDFKWEKENRENQGGRPATVMLVQPPNKMNIHPVSIKLVRDQLPKSHNVASRCRHHEEVTTSAANGVTNKMKKESKVDTVLRTPPGFLKLLGPHAVLLTTRIFSYLQALHACGHEISRCLRVATLLAE-ATTSSTREGWDDPGCDSL---NIVRH-LSTPRVIRIALEI-IAAKYNAPTGCGAATS-------------------------SQEEREI------------------------------------------------------------------------DRTQALRLLLAIVCAGGRSVKER-----------LTCSLSNWNVHDWGDAIGPTMVTLCKGTCSVHTRAAAGKLLVELGVG--NPAGSTQVWNAVLCLLEQDDDFD---RQILGCYVTVNLLARSIP---------RSSDDDIDSAHDSSSSQCP-------MRPELMVIPSVLRLGMSSCFGVREAAGDLAVFLTTQ-QGPCCYLLVSGLVGYLGRISGVDRGGPVSWIPQSLPSSRGSASFLCDGEDPDGIVHLDVESFQDID-----------DGKPRNGRRQSYPHRTNDGDSDYLDHALKLLRRICA----GSGIDRVVRDALASTRAPLAILDLIVAP 740
            +SA ARGLAIR  VD CCKN+P  P  + GA R L+QWDR++R QR+ ++KAL D LL+ +    S    Q+    G    +    EKE            + + PP +     V  + +   LP  H                                  R    FL LLG HA LL TR  S+LQ   ACGHE+  CLRV TLLAE AT   T +G  D G        +V H   TP +I  AL++ ++ + +A T   +AT                          S EE                                                                           +R +AL LL+A+V AGG+ VK+            L  S ++  +   GD +G  ++ LC+  C   TR A   LLVELG+G  +  G+ +VW+AVLCLL++ D  D    QILG  V   LL R +          R   D++ S     +   P       MRPEL ++PSVL+L +S  + VREAA  LAV L T+   PCCYL+V+GL G  G +SGV+RG P++WI        G  S    GED        V S +  D           DG P +   +S       G  + +  ALKLLRR+CA    G+G + +   ALA   APL +LDL+V P
Sbjct:    1 MSASARGLAIRHAVDGCCKNLPATPGHAPGATRLLQQWDRATRHQRDELMKALADQLLISNNET-SCPQQQACCYSGADYESGISLEKE------------VGLPPPTEPIGDGVPGEAI---LPPQHPSP-------------------------------RANVEFLSLLGHHAGLLATRFSSHLQTSFACGHELGPCLRVVTLLAESATAGRTVQGSSDDGVQDYFDPRLVGHQFCTPGLINTALQVAVSHQMSAVTSQLSATEADRRVRHRRRRQRGKITPTVPPRALSPEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRAKALGLLVALVRAGGKRVKDYILYPYPSPSSLLELSENSSPISRVGDPLGLIVMALCRPECGAGTREAGRHLLVELGLGGHDSTGNAKVWSAVLCLLDERDVQDPAGAQILGFQVAQELLVRKLSEQRGRNETLRYRGDNVGSGVLDGALPSPQKNRQRLMRPELTLMPSVLKLSLSPSYEVREAAAGLAVLLATECPRPCCYLVVAGLAGLFGLVSGVERGAPIAWIQLQRERVTGRRSREQTGEDAHSADEQSVSSSRGSDHTAESDGYDSRDGPPASSSEESNRRGAGVGGGEAI-LALKLLRRVCASGRGGTGEEELC-SALAYALAPLTVLDLVVCP 666          
BLAST of mRNA_H-elongata_contig16816.4250.1 vs. uniprot
Match: D8LQ07_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ07_ECTSI)

HSP 1 Score: 152 bits (383), Expect = 3.900e-34
Identity = 121/337 (35.91%), Postives = 165/337 (48.96%), Query Frame = 0
Query:  445 DRTQALRLLLAIVCAGGRSVKERLTCSLSNWN-----------VHDWGDAIGPTMVTLCKGTCSVHTRAAAGKLLVELGVG--NPAGSTQVWNAVLCLLEQDDDFD---RQILGCYVTVNLLARSIP---------RSSDDDIDSAHDSSSSQCP-------MRPELMVIPSVLRLGMSSCFGVREAAGDLAVFLTTQ-QGPCCYLLVSGLVGYLGRISGVDRGGPVSWIPQSLPSSRGSAS----FLCDGEDPDGIVHLDVESFQDIDDGKPRNGRRQSYPHRTNDGDSDYLDHALKLLRRICA----GSGIDRVVRDALASTRAPLAILDLIVAP 740
            +R +AL LL+A+V AGG+ VK+ L+C  S+ +           +   GD +G  ++ L +  C   TR A  +LLVELG+G  +P G+ +VW+AVLCLL+  D  D    Q LG  V   LL R            R   D++ S     +   P       MRPEL +IPSVL+L +S  + VRE A  LAV L T+   PCCYL+V+GL G  G +S V+RG P++WI        G  S                        D  DG P     +S       G  + +  ALKLLRR+C     G+G + +   ALA   APLA+LDL+V P
Sbjct:  206 NRAEALGLLVALVRAGGKRVKDYLSCPSSSPSSLLGLSQNSSPISRVGDPLGLIVMALRRPECGTDTREAGRRLLVELGLGGHDPTGNEKVWSAVLCLLDGRDIQDPAGSQTLGFRVAQELLVRRASEQRGRNGALRYRGDNVGSVVLDGALPSPQKYRQRLMRPELTLIPSVLKLSLSPIYEVREDAAGLAVLLATECPRPCCYLVVAGLAGLFGLVSEVERGAPIAWIQLQRERVTGRRSREQTXXXXXXXXXXXXXXXTADGCDSRDGSPAPSTEESDRGGAGVGGGEAI-LALKLLRRVCTSGRGGTGAEELC-SALAYALAPLAVLDLVVCP 540          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig16816.4250.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5LQT4_9PHAE1.290e-5931.05Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LQ07_ECTSI3.900e-3435.91Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig16816contigH-elongata_contig16816:2783..6775 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig16816.4250.1mRNA_H-elongata_contig16816.4250.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig16816 2783..6775 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig16816.4250.1 ID=prot_H-elongata_contig16816.4250.1|Name=mRNA_H-elongata_contig16816.4250.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=1161bp
DAHTRDSRQYRDLVTTYVHTVPPQEGVCVRISMPKRPLSEPLDHRARQEA
DRKMRSTRLARPVSTTSKKTVTSPRRFMLPRKLINREARRAAEVRESDPA
SWMVEEPAVTSFDGTTSNDTDPFIKHEHQHPRRIPHTASGLTGRWASQPP
TAVAIQADRVNRWDGREPLPPSKPRALSALARGLAIRSVVDACCKNMPPL
PDRSRGAKRFLEQWDRSSRVQRERVLKALTDHLLVGDVRCGSISTSQSGL
VKGGSLGNDFKWEKENRENQGGRPATVMLVQPPNKMNIHPVSIKLVRDQL
PKSHNVASRCRHHEEVTTSAANGVTNKMKKESKVDTVLRTPPGFLKLLGP
HAVLLTTRIFSYLQALHACGHEISRCLRVATLLAEATTSSTREGWDDPGC
DSLNIVRHLSTPRVIRIALEIIAAKYNAPTGCGAATSSQEEREIDRTQAL
RLLLAIVCAGGRSVKERLTCSLSNWNVHDWGDAIGPTMVTLCKGTCSVHT
RAAAGKLLVELGVGNPAGSTQVWNAVLCLLEQDDDFDRQILGCYVTVNLL
ARSIPRSSDDDIDSAHDSSSSQCPMRPELMVIPSVLRLGMSSCFGVREAA
GDLAVFLTTQQGPCCYLLVSGLVGYLGRISGVDRGGPVSWIPQSLPSSRG
SASFLCDGEDPDGIVHLDVESFQDIDDGKPRNGRRQSYPHRTNDGDSDYL
DHALKLLRRICAGSGIDRVVRDALASTRAPLAILDLIVAPASRGPGPLVD
KSKEKLGHPLFEEGKTFVTQTRIENETCGGEQDRQRGNNKERRQDSTKLP
LANDTRKELESTDKIWQKSATPAQPSHYCRAVAETLLEMYRRSGGTLLEA
HLDGETSASTRRDDLPATLRSDQNYNHEKLPTDSDELKGIIKAAVAGCSH
LSHSLRSGDSTGLTFCFSGHGDDIFPADGVKYLAEMDILRKNIRSLTERL
GRVLPAPTATVILPTEGKDQPQSFHGSFGGGHIACASEIGEDIGMNGNHN
AEESKKIDMVGISGDDWYHDNSGTSALSGKCEELLFFAENSEDIISSGSP
IEAEAKLIREPLNCVLLRTRDRLFSASPPVVHHRGRRRSPHVSAVAGVQK
TATGFYEEGQPEGPKVWGPEDWGEGAPTMAILTAPIVRKQKPPVRTEGES
PGPIWRTIFGG
back to top