prot_H-elongata_contig16799.4243.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig16799.4243.1
Unique Nameprot_H-elongata_contig16799.4243.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length182
Homology
BLAST of mRNA_H-elongata_contig16799.4243.1 vs. uniprot
Match: A0A6H5JL95_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL95_9PHAE)

HSP 1 Score: 218 bits (554), Expect = 5.160e-68
Identity = 100/147 (68.03%), Postives = 121/147 (82.31%), Query Frame = 0
Query:   34 AELDWNRCIRFTFLGAALVAPALHYWYGFLLRKFPGTAIPTVVKRVSLDQLVFTPVFLATFLSAIMVIDGNAAKVAPKLRADYPATLVGNWGYWIPLQIINFRFVSPPYQVLFANCGGFFWNIYLSHQSNKGLQE-----ASVDTPS 175
            +E+DW R +RFTF+GAA+VAPALH WYGFL+R+ PGTA  TVVKRV+LDQL+F PVFLA FLS +M++DGNAAK+  KLRADYP T+V NWGYWIP Q+INFRFV+P YQVL+AN  GFFWNIYLS+QSNK + +     A+VD  S
Sbjct:  139 SEIDWGRTLRFTFVGAAVVAPALHAWYGFLIRRLPGTAPATVVKRVALDQLLFAPVFLAVFLSTVMLLDGNAAKIDRKLRADYPTTVVSNWGYWIPAQVINFRFVAPVYQVLYANFVGFFWNIYLSYQSNKAVLKDMEHPAAVDVTS 285          
BLAST of mRNA_H-elongata_contig16799.4243.1 vs. uniprot
Match: D8LTH2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTH2_ECTSI)

HSP 1 Score: 211 bits (537), Expect = 2.120e-66
Identity = 94/133 (70.68%), Postives = 113/133 (84.96%), Query Frame = 0
Query:   34 AELDWNRCIRFTFLGAALVAPALHYWYGFLLRKFPGTAIPTVVKRVSLDQLVFTPVFLATFLSAIMVIDGNAAKVAPKLRADYPATLVGNWGYWIPLQIINFRFVSPPYQVLFANCGGFFWNIYLSHQSNKGL 166
            +E+DW R +RFTF+GAA+VAPALH WYGFL+++ PGTA  TVVKRV+LDQL+F P FLA FLS +M++DGNAAK+  KLRADY  TLV NWGYWIP Q+INFRFV+P YQVL+AN  GFFWNIYLS+QSNK +
Sbjct:   68 SEIDWGRTLRFTFVGAAVVAPALHAWYGFLIQRLPGTAPATVVKRVALDQLLFAPGFLAVFLSTVMLLDGNAAKIDRKLRADYTTTLVSNWGYWIPAQVINFRFVAPVYQVLYANFVGFFWNIYLSYQSNKAV 200          
BLAST of mRNA_H-elongata_contig16799.4243.1 vs. uniprot
Match: A0A835YNC4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNC4_9STRA)

HSP 1 Score: 160 bits (406), Expect = 1.220e-45
Identity = 79/162 (48.77%), Postives = 96/162 (59.26%), Query Frame = 0
Query:   18 DVGRVASAPSKAIFFGA-----ELDWNRCIRFTFLGAALVAPALHYWYGFLLRKFPGTAIPTVVKRVSLDQLVFTPVFLATFLSAIMVIDGNAAKVAPKLRADYPATLVGNWGYWIPLQIINFRFVSPPYQVLFANCGGFFWNIYLSHQSNKGLQEASVDTP 174
            + G  A A   A  +G+      LDW RC RF  L  AL APA H WYG L R  PG  +    KR++LDQ VF+PVF+  F SA+MV++G AA++  KLR DY  TLV NW  W+P Q+ NFR V   YQV  ANC G FWN YLS QS K ++ A    P
Sbjct:   95 EAGSNAGAADGAATWGSTSQQRHLDWTRCARFMLLSGALFAPAAHAWYGLLGRLLPGQTLMVATKRMALDQFVFSPVFVGVFFSALMVLEGEAARIPDKLRQDYWTTLVSNWTLWMPAQLANFRLVPLQYQVGAANCVGLFWNAYLSFQSFKKIKSAPQSQP 256          
BLAST of mRNA_H-elongata_contig16799.4243.1 vs. uniprot
Match: A0A4Q2YFM0_9BACT (Mpv17/PMP22 family protein n=1 Tax=Verrucomicrobiaceae bacterium TaxID=2026800 RepID=A0A4Q2YFM0_9BACT)

HSP 1 Score: 151 bits (381), Expect = 1.040e-42
Identity = 66/138 (47.83%), Postives = 91/138 (65.94%), Query Frame = 0
Query:   36 LDWNRCIRFTFLGAALVAPALHYWYGFLLRKFPGTAIPTVVKRVSLDQLVFTPVFLATFLSAIMVIDGNAAKVAPKLRADYPATLVGNWGYWIPLQIINFRFVSPPYQVLFANCGGFFWNIYLSHQSNKGLQEASVDT 173
            +DW R   FT +   L  P  HYWYGFL  K  GT     +KRV LDQ++F PV LA+F SA+++++G + ++  KLR D P T++ N+  WIP Q+INF+FV  PY+VL+AN  GFFWNIYLS+ +  G   ++ DT
Sbjct:   80 MDWKRTRNFTIVNTFLFPPLAHYWYGFLSVKIVGTTFMAAIKRVVLDQMLFAPVLLASFFSAVLLVNGESDRIPDKLRNDLPTTILTNYTVWIPAQLINFQFVPIPYRVLWANAVGFFWNIYLSYAAVNGTSSSAGDT 217          
BLAST of mRNA_H-elongata_contig16799.4243.1 vs. uniprot
Match: A0A6A3NKH9_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A3NKH9_9STRA)

HSP 1 Score: 147 bits (371), Expect = 3.520e-41
Identity = 69/138 (50.00%), Postives = 88/138 (63.77%), Query Frame = 0
Query:   36 LDWNRCIRFTFLGAALVAPALHYWYGFLLRKFPGTAIPTVVKRVSLDQLVFTPVFLATFLSAIMVIDGNAAKVAPKLRADYPATLVGNWGYWIPLQIINFRFVSPPYQVLFANCGGFFWNIYLSHQSN-----KGLQE 168
            LD  R   FTFLG  L++P LH WYGFL  + PG +   V KR++LDQL F P FL  FLS+++ ++GN  ++  KLRAD+      NWG W+P QI+NFRFV  P QVLF+N  G  WN YLS+ S+     KGL E
Sbjct:   81 LDVKRAAIFTFLGGFLISPVLHVWYGFLGSRLPGVSAAAVAKRLALDQLGFAPTFLPVFLSSVLTLEGNKEQIPDKLRADWWTVTKANWGVWVPAQILNFRFVPGPMQVLFSNVVGLLWNAYLSYVSHADVPAKGLLE 218          
BLAST of mRNA_H-elongata_contig16799.4243.1 vs. uniprot
Match: A0A7S2W1T0_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2W1T0_9STRA)

HSP 1 Score: 144 bits (363), Expect = 3.390e-40
Identity = 65/135 (48.15%), Postives = 88/135 (65.19%), Query Frame = 0
Query:   37 DWNRCIRFTFLGAALVAPALHYWYGFLLRKFPGTAIPTVVKRVSLDQLVFTPVFLATFLSAIMVIDGNAA-KVAPKLRADYPATLVGNWGYWIPLQIINFRFVSPPYQVLFANCGGFFWNIYLSHQSNKGLQEAS 170
            DW R  RFT LG  LVAP +HYWYG L+ +FPG++  ++ KR+ LDQ  F P+FL TF+  +  ++G +A ++  KL+ +YP  L+ NW  WIP QIINF FV   + VLF+N  GF WN YLS Q++    E S
Sbjct:   71 DWLRACRFTILGTVLVAPTVHYWYGMLMTRFPGSSFVSIFKRLILDQAFFAPLFLPTFMLNLYALEGRSAIEMQHKLQTEYPTALLANWSIWIPAQIINFAFVPQKFMVLFSNMIGFGWNAYLSWQTHDRHGEKS 205          
BLAST of mRNA_H-elongata_contig16799.4243.1 vs. uniprot
Match: A0A225WCL6_9STRA (Protein Mpv17 n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WCL6_9STRA)

HSP 1 Score: 140 bits (352), Expect = 1.190e-38
Identity = 62/136 (45.59%), Postives = 87/136 (63.97%), Query Frame = 0
Query:   37 DWNRCIRFTFLGAALVAPALHYWYGFLLRKFPGTAIPTVVKRVSLDQLVFTPVFLATFLSAIMVIDGNAAKVAPKLRADYPATLVGNWGYWIPLQIINFRFVSPPYQVLFANCGGFFWNIYLSHQSNKGLQEASVD 172
            D  R   FT LG  L++P LH WYGFL  +  G A   V+KR++LDQL F P+FL  FLS+++ ++G+A  +  KLR D+ +    NWG W+P QI+NFRFV  P QVLF+N  G  WN YLS+ S+  + +  ++
Sbjct:   56 DGKRTAIFTILGGFLISPVLHVWYGFLGSRVSGVATSAVMKRLALDQLGFAPIFLPVFLSSVLTLEGHAYDIPDKLRVDWWSVTKANWGVWVPAQILNFRFVPGPMQVLFSNVVGLLWNAYLSYVSHSTVPKTLLE 191          
BLAST of mRNA_H-elongata_contig16799.4243.1 vs. uniprot
Match: A0A835YKC9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKC9_9STRA)

HSP 1 Score: 143 bits (361), Expect = 1.610e-38
Identity = 69/130 (53.08%), Postives = 87/130 (66.92%), Query Frame = 0
Query:   36 LDWNRCIRFTFLGAALVAPALHYWYGFLLRKFPG-TAIPTVVKRVSLDQLVFTPVFLATFLSAIMVIDGNAAKVAPKLRADYPATLVGNWGYWIPLQIINFRFVSPPYQVLFANCGGFFWNIYLSHQSNK 164
            +D  R  +F  L AAL AP+ HYWY  L +   G TA+   VKR++LDQ +F PVF+  F SA+MV++G AAK+  KL+ DY  TLV NWG W+P Q+INFR V  PYQVL+AN  GFFWN  +S Q  K
Sbjct:  111 VDLKRTGKFMLLNAALFAPSAHYWYQVLAKYVKGPTAMGAAVKRMALDQFLFAPVFMGLFFSALMVVEGEAAKIPQKLKQDYWPTLVKNWGIWMPAQLINFRLVPQPYQVLWANGVGFFWNAIMSAQCFK 240          
BLAST of mRNA_H-elongata_contig16799.4243.1 vs. uniprot
Match: A0A0L0G5N4_9EUKA (Uncharacterized protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0G5N4_9EUKA)

HSP 1 Score: 136 bits (343), Expect = 6.200e-37
Identity = 65/140 (46.43%), Postives = 81/140 (57.86%), Query Frame = 0
Query:   33 GAELDWNRCIRFTFLGAALVAPALHYWYGFLLRKFPGTAIPTVVKRVSLDQLVFTPVFLATFLSAIMVIDGNAAKVAPKLRADYPATLVGNWGYWIPLQIINFRFVSPPYQVLFANCGGFFWNIYLSHQSNKGLQEASVD 172
            G+E  W R   F+ LG   + PALH WY  L R  PGT    V KR++ DQ VF PVF+ +F+S  +++ G  A V  KL   +  T+  NW  WIP Q INF FVSP  QVLFANC G  W++YLS  SN     A+ D
Sbjct:   88 GSEFGWRRFFVFSALGGLYLGPALHMWYRVLGRVLPGTTQLAVAKRLAADQFVFAPVFIPSFMSLTLILQGKIADVPKKLADAWWPTVKANWAVWIPAQYINFSFVSPNLQVLFANCVGLVWHVYLSKVSNNDNTPAAAD 227          
BLAST of mRNA_H-elongata_contig16799.4243.1 vs. uniprot
Match: A0A2J8A157_9CHLO (PXMP2/4 family protein 2 n=1 Tax=Tetrabaena socialis TaxID=47790 RepID=A0A2J8A157_9CHLO)

HSP 1 Score: 134 bits (337), Expect = 1.210e-35
Identity = 63/134 (47.01%), Postives = 77/134 (57.46%), Query Frame = 0
Query:   33 GAELDWNRCIRFTFLGAALVAPALHYWYGFLLRKFPGTAIPTVVKRVSLDQLVFTPVFLATFLSAIMVIDGNAAKVAPKLRADYPATLVGNWGYWIPLQIINFRFVSPPYQVLFANCGGFFWNIYLSHQSNKGL 166
            G  LDW R   FTF+G ALV P LHYWY  L R  P         ++ LDQ  F PVFLATF+S + +I+G  + +  KL  D   T+  NW  WIP Q  NFRFV P  QVL AN     WN Y+S+QS+K +
Sbjct:  123 GGALDWKRTATFTFMGVALVGPTLHYWYALLNRLVPARGAAGATLQLLLDQGGFAPVFLATFISVLFLIEGKGSMIRAKLEQDLVETIKVNWILWIPAQFFNFRFVPPNLQVLTANVVALAWNTYMSYQSHKAV 256          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig16799.4243.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JL95_9PHAE5.160e-6868.03Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LTH2_ECTSI2.120e-6670.68Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YNC4_9STRA1.220e-4548.77Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A4Q2YFM0_9BACT1.040e-4247.83Mpv17/PMP22 family protein n=1 Tax=Verrucomicrobia... [more]
A0A6A3NKH9_9STRA3.520e-4150.00Uncharacterized protein n=2 Tax=Phytophthora TaxID... [more]
A0A7S2W1T0_9STRA3.390e-4048.15Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A225WCL6_9STRA1.190e-3845.59Protein Mpv17 n=1 Tax=Phytophthora megakarya TaxID... [more]
A0A835YKC9_9STRA1.610e-3853.08Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A0L0G5N4_9EUKA6.200e-3746.43Uncharacterized protein n=1 Tax=Sphaeroforma arcti... [more]
A0A2J8A157_9CHLO1.210e-3547.01PXMP2/4 family protein 2 n=1 Tax=Tetrabaena social... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007248Mpv17/PMP22PFAMPF04117Mpv17_PMP22coord: 105..159
e-value: 4.5E-20
score: 71.6
IPR007248Mpv17/PMP22PANTHERPTHR11266PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17coord: 28..164
NoneNo IPR availablePANTHERPTHR11266:SF80PEROXISOMAL MEMBRANE PROTEIN 2coord: 28..164
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..43
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 102..181
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 64..82
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 83..101
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 44..63
NoneNo IPR availableTMHMMTMhelixcoord: 84..106
NoneNo IPR availableTMHMMTMhelixcoord: 42..64

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig16799contigH-elongata_contig16799:5060..6494 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig16799.4243.1mRNA_H-elongata_contig16799.4243.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig16799 4814..6884 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig16799.4243.1 ID=prot_H-elongata_contig16799.4243.1|Name=mRNA_H-elongata_contig16799.4243.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=182bp
MAARAVEEEDLLEEIQHDVGRVASAPSKAIFFGAELDWNRCIRFTFLGAA
LVAPALHYWYGFLLRKFPGTAIPTVVKRVSLDQLVFTPVFLATFLSAIMV
IDGNAAKVAPKLRADYPATLVGNWGYWIPLQIINFRFVSPPYQVLFANCG
GFFWNIYLSHQSNKGLQEASVDTPSYPQDSS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007248Mpv17_PMP22