prot_H-elongata_contig167889.4233.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig167889.4233.1
Unique Nameprot_H-elongata_contig167889.4233.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length81
Homology
BLAST of mRNA_H-elongata_contig167889.4233.1 vs. uniprot
Match: D8LB49_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB49_ECTSI)

HSP 1 Score: 115 bits (288), Expect = 3.640e-28
Identity = 58/86 (67.44%), Postives = 65/86 (75.58%), Query Frame = 0
Query:    7 VGTSGSGKSTVINLLLRFYDPEMGGVLVDGSDIRTLNLMWLRGQIGL--------------EPVLFATTIADNIAYGSDGATREEV 78
            VG SG+GKSTVINLLLRFYDPE G +L+DG DIR+ N+ WLRGQIGL              EPVLFAT+IADNIAYG +GATREEV
Sbjct: 1151 VGASGNGKSTVINLLLRFYDPERGAILIDGMDIRSFNVAWLRGQIGLVSQARPYTHILEQEEPVLFATSIADNIAYGCEGATREEV 1236          
BLAST of mRNA_H-elongata_contig167889.4233.1 vs. uniprot
Match: A0A7S0QH60_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0QH60_9CRYP)

HSP 1 Score: 102 bits (254), Expect = 1.880e-26
Identity = 48/76 (63.16%), Postives = 61/76 (80.26%), Query Frame = 0
Query:    9 TSGSGKSTVINLLLRFYDPEMGGVLVDGSDIRTLNLMWLRGQIGL---EPVLFATTIADNIAYGSDGATREEVRAS 81
            +SGSGKSTVI LLLRFYDP+ G + +DG D+R LN+ WLR Q+GL   EPVLF+ +IADN+ YG DGAT+EE+ A+
Sbjct:    1 SSGSGKSTVIQLLLRFYDPQEGAIRLDGRDLRELNVAWLRTQMGLVSQEPVLFSASIADNVRYGKDGATQEEIEAA 76          
BLAST of mRNA_H-elongata_contig167889.4233.1 vs. uniprot
Match: A0A7J8QBY7_GOSRA (ABC transmembrane type-1 domain-containing protein n=1 Tax=Gossypium raimondii TaxID=29730 RepID=A0A7J8QBY7_GOSRA)

HSP 1 Score: 108 bits (269), Expect = 3.040e-26
Identity = 52/78 (66.67%), Postives = 63/78 (80.77%), Query Frame = 0
Query:    7 VGTSGSGKSTVINLLLRFYDPEMGGVLVDGSDIRTLNLMWLRGQIGL---EPVLFATTIADNIAYGSDGATREEVRAS 81
            VG SGSGKSTVI+LL RFYDP+ G VL+DG D+R L L W+RG+IGL   EP+LFATTI +NIAYG D AT EE++A+
Sbjct:  291 VGQSGSGKSTVISLLERFYDPDSGQVLIDGVDLRELQLQWIRGKIGLVSQEPILFATTIRENIAYGKDNATNEEIKAA 368          
BLAST of mRNA_H-elongata_contig167889.4233.1 vs. uniprot
Match: A0A7J9HQ77_9ROSI (Uncharacterized protein n=1 Tax=Gossypium harknessii TaxID=34285 RepID=A0A7J9HQ77_9ROSI)

HSP 1 Score: 109 bits (272), Expect = 5.210e-26
Identity = 53/78 (67.95%), Postives = 63/78 (80.77%), Query Frame = 0
Query:    7 VGTSGSGKSTVINLLLRFYDPEMGGVLVDGSDIRTLNLMWLRGQIGL---EPVLFATTIADNIAYGSDGATREEVRAS 81
            VG SGSGKSTVI+LL RFYDP+ G VL+DG D+R L L W+RG+IGL   EP+LFATTI +NIAYG D AT EE+RA+
Sbjct:  415 VGQSGSGKSTVISLLERFYDPDSGQVLIDGVDLRELQLQWIRGKIGLVSQEPILFATTIRENIAYGKDNATNEEIRAA 492          
BLAST of mRNA_H-elongata_contig167889.4233.1 vs. uniprot
Match: A7S211_NEMVE (Predicted protein (Fragment) n=2 Tax=Nematostella vectensis TaxID=45351 RepID=A7S211_NEMVE)

HSP 1 Score: 100 bits (249), Expect = 5.970e-26
Identity = 49/75 (65.33%), Postives = 58/75 (77.33%), Query Frame = 0
Query:    7 VGTSGSGKSTVINLLLRFYDPEMGGVLVDGSDIRTLNLMWLRGQIGL---EPVLFATTIADNIAYGSDGATREEV 78
            VG SG GKSTVI L+ RFYDPE G V +DG+DIR+LNL WLR +IG+   EP LFATTIA+NI YG DG T+ E+
Sbjct:    2 VGESGCGKSTVIKLIQRFYDPENGSVCLDGTDIRSLNLHWLRQRIGVVSQEPALFATTIAENIRYGQDGVTQAEI 76          
BLAST of mRNA_H-elongata_contig167889.4233.1 vs. uniprot
Match: A0A7S0QIY5_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0QIY5_9CRYP)

HSP 1 Score: 102 bits (254), Expect = 6.000e-26
Identity = 48/76 (63.16%), Postives = 61/76 (80.26%), Query Frame = 0
Query:    9 TSGSGKSTVINLLLRFYDPEMGGVLVDGSDIRTLNLMWLRGQIGL---EPVLFATTIADNIAYGSDGATREEVRAS 81
            +SGSGKSTVI LLLRFYDP+ G + +DG D+R LN+ WLR Q+GL   EPVLF+ +IADN+ YG DGAT+EE+ A+
Sbjct:    1 SSGSGKSTVIQLLLRFYDPQEGAIRLDGRDLRELNVAWLRTQMGLVSQEPVLFSASIADNVRYGKDGATQEEIEAA 76          
BLAST of mRNA_H-elongata_contig167889.4233.1 vs. uniprot
Match: A0A6A3C248_HIBSY (ABC transporter B family member 5 n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A3C248_HIBSY)

HSP 1 Score: 105 bits (263), Expect = 2.700e-25
Identity = 50/76 (65.79%), Postives = 61/76 (80.26%), Query Frame = 0
Query:    7 VGTSGSGKSTVINLLLRFYDPEMGGVLVDGSDIRTLNLMWLRGQIGL---EPVLFATTIADNIAYGSDGATREEVR 79
            VG SGSGKSTVI+LL RFYDPE G VL+DG D++ + L W+RG+IGL   EP+LFATTI +NIAYG D AT EE++
Sbjct:  195 VGQSGSGKSTVISLLERFYDPESGEVLIDGVDLKKIQLQWIRGKIGLVSQEPILFATTIRENIAYGKDNATHEEIK 270          
BLAST of mRNA_H-elongata_contig167889.4233.1 vs. uniprot
Match: A0A1U8L9T5_GOSHI (LOW QUALITY PROTEIN: ABC transporter B family member 9-like n=23 Tax=Gossypium TaxID=3633 RepID=A0A1U8L9T5_GOSHI)

HSP 1 Score: 106 bits (265), Expect = 4.650e-25
Identity = 52/78 (66.67%), Postives = 62/78 (79.49%), Query Frame = 0
Query:    7 VGTSGSGKSTVINLLLRFYDPEMGGVLVDGSDIRTLNLMWLRGQIGL---EPVLFATTIADNIAYGSDGATREEVRAS 81
            VG SGSGKSTVI+LL RFYDP+ G VL+DG D+R L   W+RG+IGL   EP+LFATTI +NIAYG D AT EE+RA+
Sbjct:  415 VGQSGSGKSTVISLLERFYDPDSGQVLIDGVDLRELQPQWIRGKIGLVSQEPILFATTIRENIAYGKDNATNEEIRAA 492          
BLAST of mRNA_H-elongata_contig167889.4233.1 vs. uniprot
Match: UPI001922CF5C (LOW QUALITY PROTEIN: ABC transporter B family member 9-like n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=UPI001922CF5C)

HSP 1 Score: 105 bits (263), Expect = 8.670e-25
Identity = 50/76 (65.79%), Postives = 61/76 (80.26%), Query Frame = 0
Query:    7 VGTSGSGKSTVINLLLRFYDPEMGGVLVDGSDIRTLNLMWLRGQIGL---EPVLFATTIADNIAYGSDGATREEVR 79
            VG SGSGKSTVI+LL RFYDPE G VL+DG D++ + L W+RG+IGL   EP+LFATTI +NIAYG D AT EE++
Sbjct:  415 VGQSGSGKSTVISLLERFYDPESGEVLIDGVDLKKIQLQWIRGKIGLVSQEPILFATTIRENIAYGKDNATHEEIK 490          
BLAST of mRNA_H-elongata_contig167889.4233.1 vs. uniprot
Match: A0A5P1E0A8_ASPOF (Uncharacterized protein n=1 Tax=Asparagus officinalis TaxID=4686 RepID=A0A5P1E0A8_ASPOF)

HSP 1 Score: 105 bits (262), Expect = 1.180e-24
Identity = 52/78 (66.67%), Postives = 62/78 (79.49%), Query Frame = 0
Query:    7 VGTSGSGKSTVINLLLRFYDPEMGGVLVDGSDIRTLNLMWLRGQIGL---EPVLFATTIADNIAYGSDGATREEVRAS 81
            VG SGSGKSTVI+LL RFYDPE G VL+DG +I+   L W+RG+IGL   EPVLF ++I DNIAYG DGAT EE+RA+
Sbjct:  344 VGESGSGKSTVISLLERFYDPEAGEVLIDGINIKEFQLKWIRGKIGLVSQEPVLFTSSIRDNIAYGKDGATTEEIRAA 421          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig167889.4233.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LB49_ECTSI3.640e-2867.44Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S0QH60_9CRYP1.880e-2663.16Hypothetical protein (Fragment) n=1 Tax=Cryptomona... [more]
A0A7J8QBY7_GOSRA3.040e-2666.67ABC transmembrane type-1 domain-containing protein... [more]
A0A7J9HQ77_9ROSI5.210e-2667.95Uncharacterized protein n=1 Tax=Gossypium harkness... [more]
A7S211_NEMVE5.970e-2665.33Predicted protein (Fragment) n=2 Tax=Nematostella ... [more]
A0A7S0QIY5_9CRYP6.000e-2663.16Hypothetical protein (Fragment) n=1 Tax=Cryptomona... [more]
A0A6A3C248_HIBSY2.700e-2565.79ABC transporter B family member 5 n=1 Tax=Hibiscus... [more]
A0A1U8L9T5_GOSHI4.650e-2566.67LOW QUALITY PROTEIN: ABC transporter B family memb... [more]
UPI001922CF5C8.670e-2565.79LOW QUALITY PROTEIN: ABC transporter B family memb... [more]
A0A5P1E0A8_ASPOF1.180e-2466.67Uncharacterized protein n=1 Tax=Asparagus officina... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 7..79
e-value: 9.0E-33
score: 115.1
NoneNo IPR availablePANTHERPTHR24222FAMILY NOT NAMEDcoord: 7..80
NoneNo IPR availablePANTHERPTHR24222:SF50coord: 7..80
IPR003439ABC transporter-likePFAMPF00005ABC_trancoord: 7..53
e-value: 1.2E-9
score: 38.8
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 7..79

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig167889contigH-elongata_contig167889:496..1239 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig167889.4233.1mRNA_H-elongata_contig167889.4233.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig167889 466..1239 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig167889.4233.1 ID=prot_H-elongata_contig167889.4233.1|Name=mRNA_H-elongata_contig167889.4233.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=81bp
MRVCVQVGTSGSGKSTVINLLLRFYDPEMGGVLVDGSDIRTLNLMWLRGQ
IGLEPVLFATTIADNIAYGSDGATREEVRAS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003439ABC_transporter-like
IPR027417P-loop_NTPase