prot_H-elongata_contig16776.4228.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig16776.4228.1
Unique Name	prot_H-elongata_contig16776.4228.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	413

Homology

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BLAST of mRNA_H-elongata_contig16776.4228.1 vs. uniprot
Match: D8LNT5_ECTSI (Tryptophan--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNT5_ECTSI)

HSP 1 Score: 639 bits (1647), Expect = 2.780e-225
Identity = 329/413 (79.66%), Postives = 363/413 (87.89%), Query Frame = 0

Query:    4 IDPRTPTMTTALEIVKGALAAVLGFPVGKSTVGSRIIEGNKARITVKTGKAEAPTVAQMQKVMDVVSDSIAKDLPCFRLSMPRCDAEKSYGFAMYDVVEPPADVSELSLLYIEGLVLHSQLYPCLSSTRGVGKVAVTKQKFRSNKQELEVVFDVEPTENLGTED---PPQCPPPAIDSVAALNAAEIRVSSEGGSDGAARDRDEANDGGDRSQKVTPWEVEADGEVDYEKLVKSFGSSLITEDIVARVERVTGMRAHRFLRRGLFFSHRDLTQILDFYEAGKKFYLYTGRGPSSDSLHLGHLIPFHFTKYLQARNTFKVPLVVQLTDDEKFLFKPDLKLEECHRLAFENAKDIIACGFNQESTFIFSDLDYIQQMYPVVLKIQKLVTHNQDRGILGFTESHNIGYKSFHAVQA 413
            +DPRTPTMTTALEIVKGAL AV+GFP+GKST+GSRI EGNKARITVKTGKAEAPT AQMQKV+DVV+++IAKD  CFRL+MPR DAE +YG AMYDVVEPPA V ELSLLYIEGLVLHSQL+PCL ST  VGKV+VTKQKFR NKQELEV+FDVEP+ +  T+D   PPQC PP+ ++V  LNA+E RVS++ G +G   +  +A   G   QKVTPWEVEADGEVDYEKLVKSFGSSLITEDIVARVERVTG +AHRFLRRGLFFSHRDLTQILD YEAGKKF+LYTGRGPSSD+LHLGHL+PFHFTKYLQ    FKVPLVVQLTDDEKFLFKP+LKLEECHRLAFENAKDIIACGF+ ESTFIFSDLDYIQ MYPVVLKIQKLVT+NQ RGI GFTESHNIG ++F AVQA
Sbjct:    5 VDPRTPTMTTALEIVKGALCAVIGFPIGKSTIGSRISEGNKARITVKTGKAEAPTAAQMQKVVDVVNEAIAKDQACFRLTMPRKDAESTYGSAMYDVVEPPAQVEELSLLYIEGLVLHSQLHPCLPSTGPVGKVSVTKQKFRVNKQELEVMFDVEPSTDTPTDDTATPPQCVPPSAETVVLLNASEARVSADDGVEGGVEESGKAAAEG--GQKVTPWEVEADGEVDYEKLVKSFGSSLITEDIVARVERVTGRKAHRFLRRGLFFSHRDLTQILDLYEAGKKFFLYTGRGPSSDALHLGHLVPFHFTKYLQ--EAFKVPLVVQLTDDEKFLFKPELKLEECHRLAFENAKDIIACGFDPESTFIFSDLDYIQHMYPVVLKIQKLVTYNQVRGIFGFTESHNIGCQAFPAVQA 413

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BLAST of mRNA_H-elongata_contig16776.4228.1 vs. uniprot
Match: A0A835ZE99_9STRA (Tryptophan--tRNA ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE99_9STRA)

HSP 1 Score: 419 bits (1078), Expect = 2.760e-139
Identity = 227/416 (54.57%), Postives = 283/416 (68.03%), Query Frame = 0

Query:    5 DPRTPTMTTALEIVKGALAAVLGFPVGKSTVGSRIIEGNKARITVKTGKAEAPTVAQMQKVMDVVSDSIAKDLPCFRLSMPRCDAEKSYGFAMYDVVEPPADVSELSLLYIEGLVLHSQLYPCLSSTRGVGKVAVTKQKFRSNKQELEVVFDVEPTENLGTEDPPQCPPPAIDSVAALNAAEIRVS-------SEGGSDGAARDRDEANDGGDRSQKVTPWEVEADGEVDYEKLVKSFGSSLITEDIVARVERVTGMRAHRFLRRGLFFSHRDLTQILDFYEAGKKFYLYTGRGPSSDSLHLGHLIPFHFTKYLQARNTFKVPLVVQLTDDEKFLFKPDLKLEECHRLAFENAKDIIACGFNQESTFIFSDLDYIQQMYPVVLKIQKLVTHNQDRGILGFTESHNIGYKSFHAVQA 413
            DPRTP M TA+EIVKGAL+AVLGFP+G+ST+GS+I EG+K RITV+    E P    M +V +V++  + KDL C   +M R  A+ +YG AMYD  E PA+V+ L+L Y+EGL LH+  +  L ST GVG++ +TK+++ + K++LEV+F+V P     T                     +R S                             Q VTPWEVEAD EVDY KLV +FGS LI+ED+VARVER+T  RAHRFLRRGLFFSHRDL Q+LD YE G+KFYLYTGRGPSS++LHLGHL+PF FT++LQ    F VPLV+QLTDDEKFLFK +L L E HRLA ENA+DIIAC F+   TF+FSDLDYI+++YPVVL+IQK VT NQ RGI GF +S NIG  +F AVQA
Sbjct:    4 DPRTPAMHTAMEIVKGALSAVLGFPLGRSTIGSKISEGDKGRITVQLASEEKPGPEAMLRVQEVINGIVEKDLSCHVFTMARAAADAAYGDAMYDKFEVPAEVTTLTLFYLEGLALHAAPHTYLPSTGGVGRIQITKERYMTAKRQLEVMFNVLPAAGASTXXXXXXXXXXXXXXXXXAVEPLRTSVPRLLXXXXXXXXXXXXXXXXXXXXXXXXQVVTPWEVEADEEVDYNKLVVAFGSQLISEDMVARVERLTNRRAHRFLRRGLFFSHRDLNQLLDLYEKGEKFYLYTGRGPSSEALHLGHLVPFQFTQWLQ--EAFGVPLVIQLTDDEKFLFKSNLPLAETHRLARENARDIIACEFDPAKTFMFSDLDYIKELYPVVLQIQKFVTFNQTRGIFGFNDSTNIGCIAFPAVQA 417

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BLAST of mRNA_H-elongata_contig16776.4228.1 vs. uniprot
Match: W7TK77_9STRA (Tryptophan--tRNA ligase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TK77_9STRA)

HSP 1 Score: 405 bits (1042), Expect = 2.760e-134
Identity = 220/415 (53.01%), Postives = 285/415 (68.67%), Query Frame = 0

Query:    7 RTPTMTTALEIVKGALAAVLGFPVGKSTVGSRIIEGNKARITVKTGKAEAPTVAQMQKVMDVVSDSIAKDLPCFRLSMPRCDAEKSYGFAMYDVVEPPADVSELSLLYIEGLVLHSQLYPCLSSTRGVGKVAVTKQKFRSNKQELEVVFDVE-PTEN------LGTEDPPQCPPPAIDSVAALNAAEIRVSSEG-GSDGAARDRDEANDGGDRSQKVTPWEVEADGEVDYEKLVKSFGSSLITEDIVARVERVTGMRAHRFLRRGLFFSHRDLTQILDFYEAGKKFYLYTGRGPSSDSLHLGHLIPFHFTKYLQARNTFKVPLVVQLTDDEKFLFKPDLKLEECHRLAFENAKDIIACGFNQESTFIFSDLDYIQQMYPVVLKIQKLVTHNQDRGILGFTESHNIGYKSFHAVQA 413
            RTP   T+  IVKGALA VLGFP+G +T+G+   EG++ R+TV+ G+A  PT  Q  +V + ++  +A + P     + R  A+ SY  AMY+    P  ++EL++ YIE +         ++ST  VG + + K KFRS K+ELE+ + V  P+E+      +  ED    P  + ++++ LN+  +R +S G G++         +  G+  Q VTPWEVE D E+DY+KL+KSFGS  ITE +V+R+ER+T  + HRFLRRGLFFSHRDLTQ+LD YE G KFYLYTGRGPSS+SLHLGHLIPFHFT+YLQ    F VPLV+QLTDDEKF FK  L LEECHRLA+ENAKD+IACGF+ + TFIFSDLDYIQ +YP VLKIQKLVT NQ RGI GFTES + G  +F AVQA
Sbjct:    8 RTPQAVTSALIVKGALANVLGFPIGGTTIGTHYSEGHRVRLTVQIGQAPDPTETQFIQVAETINTILAANQPVHVFKLARHRAQTSYKNAMYNRHAVPESITELTIAYIEKIAFSCTAEAVVASTGMVGAITINKTKFRSAKKELEIQYTVSTPSESGPAVLAVAKEDDETLP--SSEAISLLNSDTVRQASGGKGNEKGGNGGSIGSASGEGGQVVTPWEVEGDQEIDYDKLIKSFGSMRITESLVSRIERLTNRKCHRFLRRGLFFSHRDLTQLLDLYEKGTKFYLYTGRGPSSESLHLGHLIPFHFTRYLQ--EAFDVPLVIQLTDDEKFQFKQGLALEECHRLAYENAKDVIACGFDVKKTFIFSDLDYIQHLYPTVLKIQKLVTFNQARGIFGFTESDSCGKIAFPAVQA 418

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BLAST of mRNA_H-elongata_contig16776.4228.1 vs. uniprot
Match: A0A4D9CRR7_9STRA (Tryptophan--tRNA ligase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CRR7_9STRA)

HSP 1 Score: 405 bits (1041), Expect = 1.100e-133
Identity = 222/415 (53.49%), Postives = 285/415 (68.67%), Query Frame = 0

Query:    7 RTPTMTTALEIVKGALAAVLGFPVGKSTVGSRIIEGNKARITVKTGKAEAPTVAQMQKVMDVVSDSIAKDLPCFRLSMPRCDAEKSYGFAMYDVVEPPADVSELSLLYIEGLVLHSQLYPCLSSTRGVGKVAVTKQKFRSNKQELEVVFDVE-PTEN----LGTEDPPQCPPPAIDSVAALNAAEIRVSSEGGSDGAARDRDEANDG---GDRSQKVTPWEVEADGEVDYEKLVKSFGSSLITEDIVARVERVTGMRAHRFLRRGLFFSHRDLTQILDFYEAGKKFYLYTGRGPSSDSLHLGHLIPFHFTKYLQARNTFKVPLVVQLTDDEKFLFKPDLKLEECHRLAFENAKDIIACGFNQESTFIFSDLDYIQQMYPVVLKIQKLVTHNQDRGILGFTESHNIGYKSFHAVQA 413
            RTP   T+  IVKGALA VLGFP+G +T+G+   EG++ R+TV+ G+A  PT  Q  +V + ++  +A + P     + R  A+ SY  AMY+    P  V+EL++ YIE +         ++ST  VG + + K KFRS K+ELE+ + V  P+E+    L          P+ ++++ LN+  +R +S  G +G  +  +  N G   G+  Q VTPWEVE D E+DY+KL+KSFGS  ITE +V+R+ER+T  + HRFLRRGLFFSHRDLTQ+LD YE G KFYLYTGRGPSS+SLHLGHLIPFHFT+YLQ    F VPLV+QLTDDEKF FK  L LEECHRLA+ENAKD+IACGF+ + TFIFSDLDYIQ +YP VLKIQKLVT NQ RGI GFTES + G  +F AVQA
Sbjct:    8 RTPQAVTSALIVKGALANVLGFPIGGTTIGTHYSEGHRVRLTVQIGQAPDPTETQFIQVAETINTILAANQPVHVFKLARHQAQTSYKNAMYNRHAVPESVTELTIAYIEKIAFSCTAEAVVASTGMVGAITINKTKFRSAKKELEIQYTVSTPSESGPAVLAVTKENDETLPSSEAISLLNSDTVRQAS--GGEGNEKRGNGGNIGSASGEGGQVVTPWEVEGDQEIDYDKLIKSFGSMRITESLVSRIERLTNRKCHRFLRRGLFFSHRDLTQLLDLYEKGTKFYLYTGRGPSSESLHLGHLIPFHFTRYLQ--EAFDVPLVIQLTDDEKFQFKQGLALEECHRLAYENAKDVIACGFDVKKTFIFSDLDYIQYLYPTVLKIQKLVTFNQARGIFGFTESDSCGKIAFPAVQA 418

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BLAST of mRNA_H-elongata_contig16776.4228.1 vs. uniprot
Match: A0A0G4G1K6_VITBC (Tryptophan--tRNA ligase n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4G1K6_VITBC)

HSP 1 Score: 363 bits (931), Expect = 6.460e-117
Identity = 211/433 (48.73%), Postives = 273/433 (63.05%), Query Frame = 0

Query:    7 RTPTMTTALEIVKGALAAVLGFPVGKSTVGSRIIEGNKARITVKTGKAEA-PTVAQMQKVMDVVSDSIAKDLPCFRLSMPRCDAEKSYGFAMYDVVEPPADVSELSLLYIEGLVLHSQLYPCLSSTRGVGKVAVTKQKFRSNKQELEVVFDVEPTENLGTEDPPQCPPPAIDSVAALNAAEIR--------VSSEGGSDGAARDRDEAND---------------GGDRSQKVTPWEVEADGE--VDYEKLVKSFGSSLITEDIVARVERVTGMRAHRFLRRGLFFSHRDLTQILDFYEAGKKFYLYTGRGPSSDSLHLGHLIPFHFTKYLQARNTFKVPLVVQLTDDEKFLFKPDLKLEECHRLAFENAKDIIACGFNQESTFIFSDLDYIQQMYPVVLKIQKLVTHNQDRGILGFTESHNIGYKSFHAVQA 413
            R P + TAL IVKGAL   L  P  +ST      +G   R  +  G   + P     +++ ++V+D +A ++P    ++ R  AE +YG AMYD    P  V+EL L++IE   +++ ++P   ST   G++ +TK K  SNK  LEV FD+ PTE    E   Q  P A +   A +    R        V+   G+D A        +               GG   Q+VTPWEVEAD E  +DY+KL+  FG S ITED ++R+ER+T  RAHRFLRRGLFFSHRDL  +L+ YE G+ FYLYTGRGPSS++LHLGHL+PF FTK+LQ  + F VPLV+QLTDDEKFLFK +L +EEC RLA+ENAKDI+A GF+++ TFIFSDLDYIQ MYP+VL+IQK VT+NQ RGI GFTES NIG  +F AVQA
Sbjct:    7 RHPLLDTALHIVKGALVVALRIPTARSTKSVDFKKGLPLRGAITVGPVTSEPNEEDKRRIQELVNDKVAANVPIRVFAVARQLAETTYGEAMYDDFGVPKSVTELRLVFIEKWNINANIFPVAQSTGACGRIDITKWKHNSNKNSLEVSFDLTPTEAYTDE---QNVPLATEEALANDQVPAREMVLPPADVAGTHGTDEATETNGNPQNSQXXXXXXXXXXXXTGG--GQRVTPWEVEADEETGIDYDKLIIQFGCSKITEDHISRIERLTKQRAHRFLRRGLFFSHRDLDMLLNAYEQGEPFYLYTGRGPSSEALHLGHLVPFWFTKWLQ--DAFNVPLVIQLTDDEKFLFKENLTVEECKRLAYENAKDILAIGFDKDKTFIFSDLDYIQTMYPLVLQIQKKVTYNQSRGIFGFTESDNIGKSAFPAVQA 432

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BLAST of mRNA_H-elongata_contig16776.4228.1 vs. uniprot
Match: A0A7J6QYM2_PEROL (Tryptophan--tRNA ligase n=1 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6QYM2_PEROL)

HSP 1 Score: 340 bits (872), Expect = 1.900e-110
Identity = 201/413 (48.67%), Postives = 266/413 (64.41%), Query Frame = 0

Query:    7 RTPTMTTALEIVKGALAAVLGFPVGKSTVGSRIIEGNKARITVKTGKAEAPTVAQMQKVMDVVSDSIAKDLPCFRL--SMPRCDAEKSYGFAMYDVVEPPADVSELSLLYIEGLVLHSQLYPCLSSTRGVGKVAVTKQKFRSNKQELEVVFDVEPTEN---LGTEDPPQCPPPAIDSVAALNAAEIRVSSEGGSDGAARDRDEANDGGDRSQKVTPWEVE-ADGEVDYEKLVKSFGSSLITEDIVARVERVTGMRAHRFLRRGLFFSHRDLTQILDFYEAGKKFYLYTGRGPSSDSLHLGHLIPFHFTKYLQARNTFKVPLVVQLTDDEKFLFKPDLKLEECHRLAFENAKDIIACGFNQESTFIFSDLDYIQQMYPVVLKIQKLVTHNQDRGILGFTESHNIGYKSFHAVQA 413
            R+P    AL ++KGA+  VL  P G++T      EG   ++T+ + K E PT  Q + +   V + + ++ P F++   +PR  AEK Y   MYD  + P  V EL L+Y+E   L+  ++P + ST  +G++ +TK K+ + K  LE+ F VEP  +   +  ED      P +D +A     + +++ EG              G    QKVTPWEVE AD  +DY+KL++ FG S I + ++ R+ER+TG +AHRFLRRGLFFSHRDL  +LD YE G  FYLYTGRGPSS+SLHLGHL+PF FTK+LQ  +TF VPLV+QLTDDEKF FK  L LEE HRLA+ENAKDIIACGF+ + TFIFSDLDY+  MYP V KIQKLVT+NQ RG  GFT S ++G  SF A+QA
Sbjct:    7 RSPAFDAALHVIKGAVCTVLRIPTGRTTERVSPHEGG-GKLTLNSIKEE-PTEDQKELIATNVYNKVEENAP-FKVFTGVPRELAEKKYFDTMYDSFKVPDSVKELRLVYLEQWNLNCNVHPIVKSTGLLGEINLTKWKYSAKKATLEISFTVEPASDVFEMAEEDSNVEDLPPLD-IAVPYVPDDQLNQEGVL------------GVSEGQKVTPWEVEGADEGIDYDKLIRDFGCSPIDQKLIDRMERLTGKKAHRFLRRGLFFSHRDLGILLDKYERGIPFYLYTGRGPSSESLHLGHLVPFQFTKWLQ--DTFDVPLVIQLTDDEKFFFKDYLTLEEAHRLAYENAKDIIACGFDMDKTFIFSDLDYMGTMYPNVCKIQKLVTYNQARGAFGFTGSDSVGKSSFCAIQA 401

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BLAST of mRNA_H-elongata_contig16776.4228.1 vs. uniprot
Match: A0A7J6P9A6_PEROL (Tryptophan--tRNA ligase n=4 Tax=Perkinsus TaxID=28000 RepID=A0A7J6P9A6_PEROL)

HSP 1 Score: 327 bits (838), Expect = 3.820e-103
Identity = 195/397 (49.12%), Postives = 258/397 (64.99%), Query Frame = 0

Query:   23 AAVLGFPVGKSTVGSRIIEGNKARITVKTGKAEAPTVAQMQKVMDVVSDSIAKDLPCFRL--SMPRCDAEKSYGFAMYDVVEPPADVSELSLLYIEGLVLHSQLYPCLSSTRGVGKVAVTKQKFRSNKQELEVVFDVEPTEN---LGTEDPPQCPPPAIDSVAALNAAEIRVSSEGGSDGAARDRDEANDGGDRSQKVTPWEVE-ADGEVDYEKLVKSFGSSLITEDIVARVERVTGMRAHRFLRRGLFFSHRDLTQILDFYEAGKKFYLYTGRGPSSDSLHLGHLIPFHFTKYLQARNTFKVPLVVQLTDDEKFLFKPDLKLEECHRLAFENAKDIIACGFNQESTFIFSDLDYIQQMYPVVLKIQKLVTHNQDRGILGFTESHNIGYKSFHAVQA 413
            +AVL  P G++T      EG   ++T+ + K E PT  Q + +   V + + ++ P F++   +PR  AEK Y   MYD  + P  V EL L+Y+E   L+  ++P + ST  +G++ +TK K+ + K  LE+ F VEPT +   +  ED      P +D +A     + +++ EG              G    QKVTPWEVE AD  +DY+KL++ FG + I + ++ R+ER+TG +AHRFLRRGLFFSHRDL  +LD YE G  FYLYTGRGPSS+SLHLGHL+PF FTK+LQ  +TF VPLV+QLTDDEKF FK  L LEE HRLA+ENAKDIIACGF+ + TFIFSDLDY+  MYP V KIQKLVT+NQ RG  GFT S ++G  SF A+QA
Sbjct:   20 SAVLRIPTGRTTERVSPHEGG-GKLTLNSIKEE-PTEDQKELIATNVYNKVEENAP-FKVFTGVPRELAEKKYFDTMYDSFKVPDSVKELRLVYLEQWNLNCNVHPIVKSTGLLGEINLTKWKYSAKKATLEISFTVEPTSDVFEMAEEDSNVEDLPPLD-IAVPYVPDDQLNQEGVL------------GVSEGQKVTPWEVEGADEGIDYDKLIRDFGCTPIDQKLIDRMERLTGKKAHRFLRRGLFFSHRDLGILLDKYERGIPFYLYTGRGPSSESLHLGHLVPFQFTKWLQ--DTFDVPLVIQLTDDEKFFFKDYLTLEEAHRLAYENAKDIIACGFDMDKTFIFSDLDYMGTMYPNVCKIQKLVTYNQARGAFGFTGSDSVGKSSFCAIQA 398

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BLAST of mRNA_H-elongata_contig16776.4228.1 vs. uniprot
Match: F0VBM7_NEOCL (Tryptophan--tRNA ligase n=1 Tax=Neospora caninum (strain Liverpool) TaxID=572307 RepID=F0VBM7_NEOCL)

HSP 1 Score: 316 bits (810), Expect = 5.750e-99
Identity = 186/431 (43.16%), Postives = 254/431 (58.93%), Query Frame = 0

Query:    4 IDPRTPTMTTALEIVKGALAAVLGFPVGKSTVGSRIIEGNKARITVKTGKAEAPTVAQMQKVMDVVSDSIAKDLPCFRLSMPRCDAEKSYGFAMYDVVEPPADVSELSLLYIEGLVLHSQLYPCLSSTRGVGKVAVTKQKFRSNKQELEVVFDVEPTENLGTEDPPQCPPPAIDSVAALNAAEIRVSSEGGSDGAARDRDEANDGGDRSQKVTPWEVEA-DGEVDYEKLVKSFGSSLITEDIVARVERVTGMRAHRFLRRGLFFSHRDLTQILDFYE--------------------AGKKFYLYTGRGPSSDSLHLGHLIPFHFTKYLQARNTFKVPLVVQLTDDEKFLFKPDLKLEECHRLAFENAKDIIACGFNQESTFIFSDLDYIQQMYPVVLKIQKLVTHNQDRGILGFTESHNIGYKSFHAVQA 413
            +  RTP    AL IVKGA    L    G++T   +  + NK  IT+     + PT ++ + +  +    I ++ P    ++PR  A + Y  +  D    PA+V E+ L+ +    +++ +YP L ST  + ++     KF + K++L +   V P +N           PA+     +   ++   S+          D  NDG D  Q VTPW+V+A +G +DY+KL+K FG S IT  +++R+E +TG RAH  LRRG+FFSHRDL  +LD  E                    +G  FYLYTGRGPSS++LH+GHL+PF FTKYLQ  + F VPLV+QLTDDEKFLFK +L LEE HRLAFENAKDIIACGF+ + TFIFSDL YIQ +YPV+L+IQK VT+NQ RG+ GF ES NIG  +F AVQA
Sbjct:    1 MSTRTPYQDAALAIVKGAACIALSLKTGRTTRNVKFSKDNKCSITLGPVDNQ-PTASEEELLKTLTQQKIEENCPFRVFTIPREVATRMYQESYLDEFGIPANVKEVRLVVLPEWNINANIYPTLKSTGQIAEIRFETVKFVAEKRQLCLTLQVVPADNGDA--------PAVAVEEKVAPEDLPTLSQVLPPSGVEGDDLGNDGQD-DQTVTPWDVQANEGGIDYDKLLKKFGCSAITPQLISRIEALTGKRAHHLLRRGIFFSHRDLNLLLDAIEKRQANLASEKREDGAGADAFSGPAFYLYTGRGPSSEALHIGHLVPFMFTKYLQ--DVFDVPLVIQLTDDEKFLFKENLTLEETHRLAFENAKDIIACGFDPDKTFIFSDLSYIQHLYPVILEIQKKVTYNQVRGLFGFVESDNIGKSAFPAVQA 419

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BLAST of mRNA_H-elongata_contig16776.4228.1 vs. uniprot
Match: C5KK97_PERM5 (Tryptophan--tRNA ligase n=2 Tax=Perkinsus marinus (strain ATCC 50983 / TXsc) TaxID=423536 RepID=C5KK97_PERM5)

HSP 1 Score: 328 bits (840), Expect = 1.060e-97
Identity = 200/423 (47.28%), Postives = 265/423 (62.65%), Query Frame = 0

Query:    7 RTPTMTTALEIVKGALAAVLGFPVGKSTVG-SRIIEGNKARITVKTGKAEAPTVAQMQKVMDVVSDSIAKDLPCFRL--SMPRCDAEKSYGFAMYDVVEPPADVSELSLLYIEGLVLHSQLYPCLSSTRGVGKVAVTKQKFRSNKQELEVVFDVEPT--------ENLGTEDPPQCP---PPAIDSVAALNAAEIRVSSEGGSDGAARDRDEAND-GGDRSQKVTPWEVEADGE-VDYEKLVKSFGSSLITEDIVARVERVTGMRAHRFLRRGLFFSHRDLTQILDFYEAGKKFYLYTGRGPSSDSLHLGHLIPFHFTKYLQARNTFKVPLVVQLTDDEKFLFKPDLKLEECHRLAFENAKDIIACGFNQESTFIFSDLDYIQQMYPVVLKIQKLVTHNQDRGILGFTESHNIGYKSFHAVQA 413
            R+P    AL ++KGA+  VL  P G++T   S  + G K  +T+ + K E PT  Q + +   V + + ++ P F++   +PR  AE+ Y   MYD  + P  V EL L+Y+E   L+  ++P + ST  +G+V +T  K+ + K  LE+ F +EP+        E+   ED P      P   D     +   + V +       A   D+    G    QKVTPWEVE   E +DY+KL++ FG S I + ++ R+E++TG +AHRFLRRGLFFSHRDL  +LD YE G  FYLYTGRGPSS+SLHLGHL+PF FTK+LQ  +TF VPLV+QLTDDEKF FK  L LEE HRLA+ENAKDIIACGF+ + TFIFSDLDY+  MYP V KIQKLVT+NQ RG  GFT S ++G  SF A+QA
Sbjct:    5 RSPAFDAALHVIKGAVCTVLRIPTGRTTERVSPHLGGGK--LTLNSIKEE-PTEEQKELIATNVYNKVEENAP-FKVFTGVPRDLAERKYFDTMYDSFKVPESVKELRLVYLEQWNLNCNVHPIIKSTGLLGEVNLTHWKYSAKKATLEISFTLEPSCDVFEMAEEDGNVEDLPSLDIAVPYVPDGTITYHFKGVIVVT------LAEQLDQNRVLGVSNCQKVTPWEVEGSDEGIDYDKLIRDFGCSPIDQKLIDRMEKLTGKKAHRFLRRGLFFSHRDLGILLDKYERGIPFYLYTGRGPSSESLHLGHLVPFQFTKWLQ--DTFDVPLVIQLTDDEKFFFKDYLSLEEAHRLAYENAKDIIACGFDMDKTFIFSDLDYMGTMYPNVCKIQKLVTYNQARGAFGFTGSDSVGKSSFCAIQA 415

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BLAST of mRNA_H-elongata_contig16776.4228.1 vs. uniprot
Match: A0A2A9M2P2_9APIC (Tryptophan--tRNA ligase n=1 Tax=Besnoitia besnoiti TaxID=94643 RepID=A0A2A9M2P2_9APIC)

HSP 1 Score: 310 bits (793), Expect = 2.540e-96
Identity = 190/453 (41.94%), Postives = 255/453 (56.29%), Query Frame = 0

Query:    7 RTPTMTTALEIVKGALAAVLGFPVGKSTVGSRIIEGNKARITVKTGKAEA-PTVAQMQKVMDVVSDSIAKDLPCFRLSMPRCDAEKSYGFAMYDVVEPPADVSELSLLYIEGLVLHSQLYPCLSSTRGVGKVAVTKQKFRSNKQELEVVFDVEPT------------ENLGTEDPPQC----PPPAIDSVAALNAAEIRVSSEGGSDGAARDRDEANDGGDRSQKVTPWEVEADGE-VDYEKLVKSFGSSLITEDIVARVERVTGMRAHRFLRRGLFFSHRDLTQILDFYEA----------------------------GKKFYLYTGRGPSSDSLHLGHLIPFHFTKYLQARNTFKVPLVVQLTDDEKFLFKPDLKLEECHRLAFENAKDIIACGFNQESTFIFSDLDYIQQMYPVVLKIQKLVTHNQDRGILGFTESHNIGYKSFHAVQA 413
            RTP    AL IVKGA    LG   G++T   +  +  KA +T+  G  EA P+  +++ +  + S  I ++ P   L++PR  A++ Y  +  D    PA V  + L+ ++   +++ ++P L ST  +  +   +  F   K++L +   V P             +N+  E+ P      PP  ++        E   SSEG                   Q VTPWEV+   E +DY KL+K FG S IT ++VAR+E++TG RAH  LRRG+FFSHRDL  +LD  E                             G  FYLYTGRGPSS++LH+GHLIPF FTKYLQ  +TF VPLV+QLTDDEKFLFK +L LEE HRLAFENAKDIIACGF+ + TFIFSDL YIQ +YP++L+IQK VT+NQ RG+ GF ES N+G  +F AVQA
Sbjct:    5 RTPFQDAALAIVKGAACVALGLKTGRTTQNVKFSKDYKAVLTL--GPIEASPSATEVELLQTLTSQKIEENAPFRVLTVPRDVADRLYKESYLDEFGIPASVKSVRLVILDEWNINANIHPTLKSTGLISDIKFERFMFIEEKKQLSISIQVVPAVAADAADLCAEEQNVNGEELPSLSQVLPPSGVED-------EEAGSSEGS-----------------DQTVTPWEVQGSDEGIDYNKLLKKFGCSAITPELVARIEKLTGKRAHHLLRRGIFFSHRDLNLLLDALEKRQNAEKLQASKREDGSAGEAAKGDKESEGPAFYLYTGRGPSSEALHIGHLIPFMFTKYLQ--DTFDVPLVIQLTDDEKFLFKENLTLEETHRLAFENAKDIIACGFDPDKTFIFSDLSYIQHLYPIILEIQKKVTYNQVRGLFGFCESDNVGKSAFPAVQA 429

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig16776.4228.1 vs. uniprot

BLAST of mRNA_H-elongata_contig16776.4228.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LNT5_ECTSI	2.780e-225	79.66	Tryptophan--tRNA ligase n=2 Tax=Ectocarpus TaxID=2...	[more]
A0A835ZE99_9STRA	2.760e-139	54.57	Tryptophan--tRNA ligase n=1 Tax=Tribonema minus Ta...	[more]
W7TK77_9STRA	2.760e-134	53.01	Tryptophan--tRNA ligase n=1 Tax=Nannochloropsis ga...	[more]
A0A4D9CRR7_9STRA	1.100e-133	53.49	Tryptophan--tRNA ligase n=1 Tax=Nannochloropsis sa...	[more]
A0A0G4G1K6_VITBC	6.460e-117	48.73	Tryptophan--tRNA ligase n=2 Tax=Vitrella brassicaf...	[more]
A0A7J6QYM2_PEROL	1.900e-110	48.67	Tryptophan--tRNA ligase n=1 Tax=Perkinsus olseni T...	[more]
A0A7J6P9A6_PEROL	3.820e-103	49.12	Tryptophan--tRNA ligase n=4 Tax=Perkinsus TaxID=28...	[more]
F0VBM7_NEOCL	5.750e-99	43.16	Tryptophan--tRNA ligase n=1 Tax=Neospora caninum (...	[more]
C5KK97_PERM5	1.060e-97	47.28	Tryptophan--tRNA ligase n=2 Tax=Perkinsus marinus ...	[more]
A0A2A9M2P2_9APIC	2.540e-96	41.94	Tryptophan--tRNA ligase n=1 Tax=Besnoitia besnoiti...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.54.20		coord: 80..126 e-value: 4.0E-19 score: 71.0
None	No IPR available	GENE3D	3.30.980.10		coord: 13..155 e-value: 4.0E-19 score: 71.0
None	No IPR available	PANTHER	PTHR10055:SF1	TRYPTOPHAN--TRNA LIGASE, CYTOPLASMIC	coord: 202..413
None	No IPR available	PANTHER	PTHR10055	TRYPTOPHANYL-TRNA SYNTHETASE	coord: 202..413
None	No IPR available	SUPERFAMILY	52374	Nucleotidylyl transferase	coord: 213..413
IPR014729	Rossmann-like alpha/beta/alpha sandwich fold	GENE3D	3.40.50.620		coord: 206..413 e-value: 7.9E-86 score: 289.7
IPR002305	Aminoacyl-tRNA synthetase, class Ic	PFAM	PF00579	tRNA-synt_1b	coord: 282..399 e-value: 3.4E-5 score: 23.3
IPR001412	Aminoacyl-tRNA synthetase, class I, conserved site	PROSITE	PS00178	AA_TRNA_LIGASE_I	coord: 292..302
IPR018163	Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily	SUPERFAMILY	55186	ThrRS/AlaRS common domain	coord: 12..154

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig16776	contig	H-elongata_contig16776:977..7555 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig16776.4228.1	mRNA_H-elongata_contig16776.4228.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig16776 977..7555 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig16776.4228.1 ID=prot_H-elongata_contig16776.4228.1|Name=mRNA_H-elongata_contig16776.4228.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=413bp
MAAIDPRTPTMTTALEIVKGALAAVLGFPVGKSTVGSRIIEGNKARITVK
TGKAEAPTVAQMQKVMDVVSDSIAKDLPCFRLSMPRCDAEKSYGFAMYDV
VEPPADVSELSLLYIEGLVLHSQLYPCLSSTRGVGKVAVTKQKFRSNKQE
LEVVFDVEPTENLGTEDPPQCPPPAIDSVAALNAAEIRVSSEGGSDGAAR
DRDEANDGGDRSQKVTPWEVEADGEVDYEKLVKSFGSSLITEDIVARVER
VTGMRAHRFLRRGLFFSHRDLTQILDFYEAGKKFYLYTGRGPSSDSLHLG
HLIPFHFTKYLQARNTFKVPLVVQLTDDEKFLFKPDLKLEECHRLAFENA
KDIIACGFNQESTFIFSDLDYIQQMYPVVLKIQKLVTHNQDRGILGFTES
HNIGYKSFHAVQA

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR014729	Rossmann-like_a/b/a_fold
IPR002305	aa-tRNA-synth_Ic
IPR001412	aa-tRNA-synth_I_CS
IPR018163	Thr/Ala-tRNA-synth_IIc_edit