prot_H-elongata_contig16750.4210.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig16750.4210.1
Unique Nameprot_H-elongata_contig16750.4210.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length533
Homology
BLAST of mRNA_H-elongata_contig16750.4210.1 vs. uniprot
Match: A0A6H5KMY2_9PHAE (Bromo domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMY2_9PHAE)

HSP 1 Score: 375 bits (964), Expect = 2.180e-120
Identity = 254/585 (43.42%), Postives = 320/585 (54.70%), Query Frame = 0
Query:    1 MDTRDLFRHPVTEAIAPGYDKLIKRPMDLSTSLKKIRKGGYHTFGDFDHDLKLMWKNCRTFNGPGTLFYEEAIKQEEGWSKMVSSFEETLREQELYATSGGGGPCRPLTAASGGATSGKHKAGSAATTTKYSPCLDPL------LFPMAPATQLDGQGLGRRVGLASILLSEPFAAKIMYRYASDRVPDACRRREILPRDHPTFAPLLQLLELGDAARAMFRADSFGVRAVEEDLMRKVLPCVVALHARAQDAIRRCRKSQRRVSSEDGRCEKVESEGGGNDSAKHDAADEPGFPQDWKEWYKEFPVVRRLTCTMLCRALVEGCDEAAALLMPAAVAAVKRMPDELWLWASLREIL-------AGGARGALKTKDGGKAVA------KAGKKIKADPHLL-PETMMHTFTLFSRGLESAACSDAVFGESLKCITSLLPMVTMV------------------TTPPPGETGKPTGVTI---AVLEEIMDRAVTRAARPPRTPRTGAEVRRVKDALEAVFAKAPSGW-------REKFAYNKKK----KTLAXXXXXXXXXXXXXGKAGDGRPPRPPRSFTIKGPKR 533
            MD    F+ PVTEAIA GY K++K PMDL T LKKI+ GGY +FGDFD DLKLMW+NCRT+NG GT + +EA++QEE WSK+ +  E  LR QE   +                                              L PMA ATQL+  G+GRRVGLAS+LL+EPFAAK+MYR+AS+R+P+AC  R ILPRDHP +APL+QLL+LG++AR M RA++FGVR V+ ++ R VLPCVVALHARA                                             QDW+ WY + P +RRL CTMLCRA+V G DEAAA+LMPAA AAVKRM D+ WLWASL E+        A  A  A    +GG  VA      K GK+    P +L PET++    LFS GLE A  +DAVF ++L+ +  LLP+ +                    + P P   GK     +   + LE+++++A  RAARPPR P + AE  R K+A   V AK+P GW       R K A   +K    K +     XXXXXXXXX     GRP RP    +IKGPKR
Sbjct:    1 MDKNKWFKDPVTEAIAEGYHKVVKTPMDLGTILKKIKGGGYPSFGDFDRDLKLMWQNCRTYNGEGTQYNKEALRQEEEWSKISAKIENDLRHQEARPSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALAPMAQATQLERDGIGRRVGLASVLLAEPFAAKLMYRHASERIPEACCERGILPRDHPVYAPLVQLLDLGESARHMLRANTFGVREVKAEVTRAVLPCVVALHARAAXXXXXXXXXXXXXXXX-------------XXXXXXXXXXXXXAGQDWRGWYSDVPAIRRLVCTMLCRAMVRGSDEAAAVLMPAAKAAVKRMADQRWLWASLGELAQRSADASAATAAAAAPVNEGGGVVAAGVAGKKCGKEKGTMPRVLKPETLLLVLELFSTGLELALVTDAVFIKALELVAGLLPLASPXXXXXXXXXXXXXXXGGDKSKPKPSAPGKGAVTALLPRSALEDVVNQAAARAARPPRRPLSQAEELRAKEAFAKVLAKSPPGWANKVSEYRAKLAEKSRKGGGGKVVGDGGGXXXXXXXXXXXXXAGRPSRP---ISIKGPKR 569          
BLAST of mRNA_H-elongata_contig16750.4210.1 vs. uniprot
Match: D7FZE7_ECTSI (Bromo domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZE7_ECTSI)

HSP 1 Score: 376 bits (966), Expect = 1.050e-117
Identity = 236/531 (44.44%), Postives = 297/531 (55.93%), Query Frame = 0
Query:    1 MDTRDLFRHPVTEAIAPGYDKLIKRPMDLSTSLKKIRKGGYHTFGDFDHDLKLMWKNCRTFNGPGTLFYEEAIKQEEGWSKMVSSFEETLREQELYATSGGGGPCRPLTAASGGATSGKHKAGSAATTTKYSPCLDPL---------LFPMAPATQLDGQGLGRRVGLASILLSEPFAAKIMYRYASDRVPDACRRREILPRDHPTFAPLLQLLELGDAARAMFRADSFGVRAVEEDLMRKVLPCVVALHARAQDAIRRCRKSQRRVSSEDGRCEKVESEGGGNDSAKHDAADEPGFPQDWKEWYKEFPVVRRLTCTMLCRALVEGCDEAAALLMPAAVAAVKRMPDELWLWASLREIL------AGGARGALKTKDGGKAVA------KAGKKIKADPHLL-PETMMHTFTLFSRGLESAACSDAVFGESLKCITSLLPMVTMV-------------------TTPPPGETGKPTGVTI---AVLEEIMDRAVTRAARPPRTPRTGAEVRRVKDALEAVFAKAPSGWREK 487
            MD    F+ PVTEAIA GY K+IK PMDL T LKKI+ GGY +FGDFD DLKLMW+NCRT+NG GT + +EA++QEE WSK+ +  E  LR QE   T  GG                                             L PMA ATQL+  G+GRRVGLAS+LL+EPFAAK+MYR+AS+R+P+ C  R ILPRDHP +APL+QLL+LG++AR M RA++FGVR V+  + R VLPCVVALHARA                                 A           QDW+ WY + P +RRL CTMLCRA+V G DEAA +LMPAA AAVKRM D+ WLWASL E++      +  A  A   KDGG  VA      K GK+  A P +L PET++    LFS GLE A  +DAVF ++L+ +  LLP+ +                     + P P   GK     +   + LE+++++A  RAARPPR P + AE  R K+A   VFAK+P GW  K
Sbjct:  255 MDKNKWFKDPVTEAIAEGYHKVIKTPMDLGTILKKIKGGGYPSFGDFDRDLKLMWQNCRTYNGEGTQYNKEALRQEEEWSKISAKIENDLRHQE---TRPGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALAPMAQATQLERDGIGRRVGLASVLLAEPFAAKLMYRHASERIPEVCCERGILPRDHPVYAPLVQLLDLGESARHMLRANTFGVREVKAGVTRAVLPCVVALHARAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAT--------AGQDWRGWYSDVPAIRRLVCTMLCRAMVRGSDEAAGVLMPAAKAAVKRMADQRWLWASLGELVQRSADASAAAVAAAPAKDGGGVVAAGVAGKKGGKEKGAVPRVLKPETLLLVLELFSTGLELALVTDAVFIKALELVAGLLPLASPXXXXXXXXXXXXXXXXGGDKSKPKPSAPGKGAVAALLPRSALEDVVNQAAARAARPPRRPLSEAEELRAKEAFAKVFAKSPPGWANK 774          
BLAST of mRNA_H-elongata_contig16750.4210.1 vs. uniprot
Match: A0A367JUE8_RHIAZ (Bromodomain and PHD finger-containing protein 1 (Fragment) n=1 Tax=Rhizopus azygosporus TaxID=86630 RepID=A0A367JUE8_RHIAZ)

HSP 1 Score: 91.3 bits (225), Expect = 4.140e-16
Identity = 37/100 (37.00%), Postives = 63/100 (63.00%), Query Frame = 0
Query:    1 MDTRDLFRHPVTEAIAPGYDKLIKRPMDLSTSLKKIRKGGYHTFGDFDHDLKLMWKNCRTFNGPGTLFYEEAIKQEEGWSKMVSSFEETLREQELYATSG 100
            +D +D+F+HPVTE +APGY+ +I+ PM  S  LK++    Y  F  F+HD+ L+WKNC T+N P T +Y+ A + ++  + +++  +E     E+   +G
Sbjct:    6 LDKKDIFKHPVTEDVAPGYNDIIQEPMSFSEVLKRLACHFYTDFDTFEHDISLIWKNCMTYNNPDTSYYKLAQRLQKASNSLIAEAKEAYDALEIDRQTG 105          
BLAST of mRNA_H-elongata_contig16750.4210.1 vs. uniprot
Match: A0A367KDI8_RHIAZ (NuA3 HAT complex component nto1 n=1 Tax=Rhizopus azygosporus TaxID=86630 RepID=A0A367KDI8_RHIAZ)

HSP 1 Score: 86.3 bits (212), Expect = 5.770e-14
Identity = 36/100 (36.00%), Postives = 60/100 (60.00%), Query Frame = 0
Query:    1 MDTRDLFRHPVTEAIAPGYDKLIKRPMDLSTSLKKIRKGGYHTFGDFDHDLKLMWKNCRTFNGPGTLFYEEAIKQEEGWSKMVSSFEETLREQELYATSG 100
            +D +D+F+HPVTE +APGY  +I+ PM  S  LK++    Y  F  F+ D+ L+WKNC T+N P T +Y+ A + ++    +++  +E     E+   +G
Sbjct:  625 LDKKDIFKHPVTEDVAPGYSDIIQEPMSFSEVLKRLACHFYTDFDTFERDISLIWKNCMTYNKPDTSYYKLAQRLQKASDSLIARAKEAYDALEIDRQTG 724          
BLAST of mRNA_H-elongata_contig16750.4210.1 vs. uniprot
Match: A0A8J2X769_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X769_9STRA)

HSP 1 Score: 80.1 bits (196), Expect = 2.590e-12
Identity = 42/101 (41.58%), Postives = 59/101 (58.42%), Query Frame = 0
Query:    2 DTRDLFRHPVTEAIAPGYDKLIKRPMDLSTSLKKIRK--GGYHTFGDFDHDLKLMWKNCRTFNGPGTLFYE------EAIKQEEGWSKMVSSFEETLREQE 94
            D+ DLF  PVT+AIAPGY K IK PMDLST   KI +    Y + G F+ D+KLM +NCR +NGP ++         +A    + W ++ +SF++     E
Sbjct:  268 DSTDLFAFPVTDAIAPGYSKKIKEPMDLSTMRSKILRVHAPYRSIGAFECDIKLMVENCRVYNGPNSILARSLGAARKARALWKAWLQIKASFQDPREVSE 368          
BLAST of mRNA_H-elongata_contig16750.4210.1 vs. uniprot
Match: UPI001ED8B089 (uncharacterized protein LOC124158139 isoform X1 n=2 Tax=Ischnura elegans TaxID=197161 RepID=UPI001ED8B089)

HSP 1 Score: 77.4 bits (189), Expect = 3.920e-11
Identity = 33/71 (46.48%), Postives = 46/71 (64.79%), Query Frame = 0
Query:    2 DTRDLFRHPVTEAIAPGYDKLIKRPMDLSTSLKKIRKGGYHTFGDFDHDLKLMWKNCRTFNGPGTLFYEEA 72
            D    F  PVT++IAPGY ++I+RPMD ST  +KI +G Y T G++  D KLM  N   +N P T++Y+ A
Sbjct:  345 DPHHFFAWPVTDSIAPGYSRIIRRPMDFSTMKQKIDEGQYATLGEYVEDFKLMCNNAMVYNHPDTIYYKAA 415          
BLAST of mRNA_H-elongata_contig16750.4210.1 vs. uniprot
Match: A0A7M5X9E6_9CNID (Bromo domain-containing protein n=1 Tax=Clytia hemisphaerica TaxID=252671 RepID=A0A7M5X9E6_9CNID)

HSP 1 Score: 76.3 bits (186), Expect = 6.540e-11
Identity = 36/98 (36.73%), Postives = 58/98 (59.18%), Query Frame = 0
Query:    2 DTRDLFRHPVTEAIAPGYDKLIKRPMDLSTSLKKIRKGGYHTFGDFDHDLKLMWKNCRTFNGPGTLFYEEAIKQEEGWSKMVSSFEETLREQELYATS 99
            D  ++F+ PV++A+APGY K+IK+PMD  T  +KI K  Y +  +   D  LM  N   +NGP T++Y+ A        KM+S   +TL +++++  S
Sbjct:  137 DVYNIFQFPVSDAVAPGYSKVIKKPMDFMTMSQKIEKDEYTSIEEMKADFLLMCSNAMLYNGPDTIYYKSA-------DKMLSIGLKTLSKEKMHKVS 227          
BLAST of mRNA_H-elongata_contig16750.4210.1 vs. uniprot
Match: A0A1E7FWW3_9STRA (Bromodomain-containing protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FWW3_9STRA)

HSP 1 Score: 67.8 bits (164), Expect = 7.080e-11
Identity = 27/56 (48.21%), Postives = 39/56 (69.64%), Query Frame = 0
Query:    7 FRHPVTEAIAPGYDKLIKRPMDLSTSLKKIRKGGYHTFGDFDHDLKLMWKNCRTFN 62
            F +PVT+AIAPGY K+IK+PM + T + KI    YH    ++ D++LM+KNC  +N
Sbjct:    1 FLNPVTDAIAPGYSKVIKKPMSIGTMINKIENNQYHDIKTWEQDVRLMFKNCVDYN 56          
BLAST of mRNA_H-elongata_contig16750.4210.1 vs. uniprot
Match: A0A8K0JNT4_9TREE (Uncharacterized protein n=1 Tax=Filobasidium floriforme TaxID=5210 RepID=A0A8K0JNT4_9TREE)

HSP 1 Score: 75.9 bits (185), Expect = 1.280e-10
Identity = 38/91 (41.76%), Postives = 56/91 (61.54%), Query Frame = 0
Query:    5 DLFRHPVT--EAIAPGYDKLIKRPMDLSTSLKKIRKGGYHTFGDFDHDLKLMWKNCRTFNGPGTLFYEEAIKQEEGWSKMVSSFEETLREQ 93
            D FR+PV   E  APGY K+IKRP+DLS    K+  G Y     F  DL L+  NC+T+NG G+L +E A++ E+ ++   +  E+TL ++
Sbjct: 1186 DFFRYPVPDDENFAPGYYKIIKRPIDLSAIKHKLSDGQYENRHQFKEDLDLIVHNCKTYNGEGSLVFEAAVEFEKVFTGQWARVEKTLSKK 1276          
BLAST of mRNA_H-elongata_contig16750.4210.1 vs. uniprot
Match: A0A7S1Y2M2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1Y2M2_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 1.820e-10
Identity = 66/220 (30.00%), Postives = 100/220 (45.45%), Query Frame = 0
Query:    2 DTRDLFRHPVTEAIAPGYDKLIKRPMDLSTSLKKIRKGGYHTFGDFDHDLKLMWKNCRTFN--GPGTLFYEEAIKQEEGWSKMVSSFEETLREQELYATSGGGGPCR--------------PLTAASGGATSGKHKAGSAATTTKYSPCLDPLLFPMAPATQLDGQGLGRRVGLASILLSEPFAAKIMYRYASDRVPDACRRREILPRDHPTFAPLLQLL 205
            D + LF +PVT+ IAPGY K+I +P+     +K++ K  Y T  D+D D+KLM+ NC T+N    G  F  EA +Q++ +S+ +    + L ++E         P +              PL    GG +S K +        K +P  + L  P  PA             LAS+LL +PF  ++M       +    R+   +P  H T   LLQLL
Sbjct:   78 DPQSLFLNPVTDDIAPGYSKVIDKPI----CIKQMEKNTYKTLQDWDRDVKLMYTNCITYNVGNAGQWFRGEARRQKQVFSEDILPQAKRLYQEETAKHIIKPPPAKVEKEKAKRVIEEVEPL---DGGVSSNKKRK-------KDAPGTEHL--PSLPA-------------LASMLLCDPFVVRLMLDRIIRSLRIDTRKGATIPLSHKTVPSLLQLL 268          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig16750.4210.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KMY2_9PHAE2.180e-12043.42Bromo domain-containing protein n=1 Tax=Ectocarpus... [more]
D7FZE7_ECTSI1.050e-11744.44Bromo domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A367JUE8_RHIAZ4.140e-1637.00Bromodomain and PHD finger-containing protein 1 (F... [more]
A0A367KDI8_RHIAZ5.770e-1436.00NuA3 HAT complex component nto1 n=1 Tax=Rhizopus a... [more]
A0A8J2X769_9STRA2.590e-1241.58Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
UPI001ED8B0893.920e-1146.48uncharacterized protein LOC124158139 isoform X1 n=... [more]
A0A7M5X9E6_9CNID6.540e-1136.73Bromo domain-containing protein n=1 Tax=Clytia hem... [more]
A0A1E7FWW3_9STRA7.080e-1148.21Bromodomain-containing protein (Fragment) n=1 Tax=... [more]
A0A8K0JNT4_9TREE1.280e-1041.76Uncharacterized protein n=1 Tax=Filobasidium flori... [more]
A0A7S1Y2M2_9STRA1.820e-1030.00Hypothetical protein (Fragment) n=1 Tax=Grammatoph... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001487BromodomainPRINTSPR00503BROMODOMAINcoord: 32..50
score: 24.6
coord: 50..69
score: 35.65
coord: 16..32
score: 49.49
IPR001487BromodomainSMARTSM00297bromo_6coord: 1..95
e-value: 3.6E-11
score: 53.1
IPR001487BromodomainPFAMPF00439Bromodomaincoord: 6..72
e-value: 2.2E-18
score: 66.1
IPR001487BromodomainPROSITEPS50014BROMODOMAIN_2coord: 1..69
score: 17.163
IPR010405Cofactor of BRCA1PFAMPF06209COBRA1coord: 156..246
e-value: 1.2E-7
score: 31.0
IPR036427Bromodomain-like superfamilyGENE3D1.20.920.10coord: 1..98
e-value: 1.6E-25
score: 91.4
IPR036427Bromodomain-like superfamilySUPERFAMILY47370Bromodomaincoord: 5..90
NoneNo IPR availablePANTHERPTHR22881:SF11SWI/SNF NUCLEOSOME REMODELING COMPLEX COMPONENTcoord: 2..207
NoneNo IPR availablePANTHERPTHR22881BROMODOMAIN CONTAINING PROTEINcoord: 2..207

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig16750contigH-elongata_contig16750:616..6827 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig16750.4210.1mRNA_H-elongata_contig16750.4210.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig16750 586..6827 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig16750.4210.1 ID=prot_H-elongata_contig16750.4210.1|Name=mRNA_H-elongata_contig16750.4210.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=533bp
MDTRDLFRHPVTEAIAPGYDKLIKRPMDLSTSLKKIRKGGYHTFGDFDHD
LKLMWKNCRTFNGPGTLFYEEAIKQEEGWSKMVSSFEETLREQELYATSG
GGGPCRPLTAASGGATSGKHKAGSAATTTKYSPCLDPLLFPMAPATQLDG
QGLGRRVGLASILLSEPFAAKIMYRYASDRVPDACRRREILPRDHPTFAP
LLQLLELGDAARAMFRADSFGVRAVEEDLMRKVLPCVVALHARAQDAIRR
CRKSQRRVSSEDGRCEKVESEGGGNDSAKHDAADEPGFPQDWKEWYKEFP
VVRRLTCTMLCRALVEGCDEAAALLMPAAVAAVKRMPDELWLWASLREIL
AGGARGALKTKDGGKAVAKAGKKIKADPHLLPETMMHTFTLFSRGLESAA
CSDAVFGESLKCITSLLPMVTMVTTPPPGETGKPTGVTIAVLEEIMDRAV
TRAARPPRTPRTGAEVRRVKDALEAVFAKAPSGWREKFAYNKKKKTLAAA
AVGSGAGAGAGGKAGDGRPPRPPRSFTIKGPKR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001487Bromodomain
IPR010405COBRA1
IPR036427Bromodomain-like_sf