mRNA_H-elongata_contig16726.4203.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig16726.4203.1
Unique NamemRNA_H-elongata_contig16726.4203.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig16726.4203.1 vs. uniprot
Match: D7G4H7_ECTSI (Glycosyltransferase, family GT47 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4H7_ECTSI)

HSP 1 Score: 303 bits (777), Expect = 1.430e-101
Identity = 142/235 (60.43%), Postives = 180/235 (76.60%), Query Frame = 1 
Query:    1 GRAERPVVAASFAMEAASNMHTCYYRSGYDMSFPLFPHNVFPEVATTLPEDRRFFLTVKASLYLYGHGSEERMSLVPLHDEANGVIMALHCFEMHHEHLFPENLDYCQWLRERYDVYDYASVMNTTFGIVPAGRSPGSFRLPEVMSAGAIPVFVGRDLVPPFREQFDWESFSFMFSPDDVGPAMIKTLQSVPPEELRVMQQKSLDAYWKIFGGKTNSFESIARKVVDLLIRRISY 705
            GRA RP VA SFAMEAA+NMHTC+YRSGYD+S PL P  V  ++A   P DR FFLT K +LY+ GHGSEER+SL+PL DE NGV++ +HCFE H EHL PEN ++CQ L+++Y+ YDY S+MN+TFG+VPAGR P ++RL EVMSAG+IPVFVGRDLVPPF EQ DW S SF F+PD+V   M+ TL +VPP +L  MQ+KSL+AY ++FG   N F   AR ++ +L RR+ +
Sbjct:    5 GRASRPDVAGSFAMEAATNMHTCFYRSGYDISVPLAPRQVLHDLANVSPLDREFFLTTKCTLYISGHGSEERISLLPLQDEENGVVVTMHCFEEHQEHLLPENAEFCQALKDQYEGYDYRSLMNSTFGLVPAGRGPATYRLGEVMSAGSIPVFVGRDLVPPFMEQIDWPSISFAFTPDEVESRMMSTLLAVPPAQLEEMQRKSLEAYGRMFGADVNDFRPSARIILGILRRRLGH 239
[Close]
BLAST of mRNA_H-elongata_contig16726.4203.1 vs. uniprot
Match: A0A6H5JGQ8_9PHAE (GT47 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGQ8_9PHAE)

HSP 1 Score: 305 bits (782), Expect = 1.100e-99
Identity = 150/235 (63.83%), Postives = 182/235 (77.45%), Query Frame = 1 
Query:    1 GRAERPVVAASFAMEAASNMHTCYYRSGYDMSFPLFPHNVFPEVATTLPEDRRFFLTVKASLYLYGHGSEERMSLVPLHDEANGVIMALHCFEMHHEHLFPENLDYCQWLRERYDVYDYASVMNTTFGIVPAGRSPGSFRLPEVMSAGAIPVFVGRDLVPPFREQFDWESFSFMFSPDDVGPAMIKTLQSVPPEELRVMQQKSLDAYWKIFGGKTNSFESIARKVVDLLIRRISY 705
            GR  RP VA S+AMEAA+NMHTC+YRSGYD+S PL P +VF ++A   P DR FFLT K SLYL GHGS ERMSLVPL DEANGVIM+LHCFE+H EHL PEN++YC+ L ++YD + Y S+MNTTFG+VPAGRSPG++RL EVMSAG+IPVFVG DLVPPF E  DW SFSF F+PD V   M++TL++VP  EL  MQ+KSL+AY +IFG     F   AR V++ L RR+ +
Sbjct:  193 GRDSRPDVAGSYAMEAATNMHTCFYRSGYDISVPLAPKHVFNDLADVDPWDRNFFLTTKGSLYLSGHGSGERMSLVPLQDEANGVIMSLHCFEVHEEHLLPENVEYCRALSDQYDDHSYTSLMNTTFGLVPAGRSPGTYRLGEVMSAGSIPVFVGWDLVPPFEELIDWSSFSFAFAPDQVESQMVRTLRAVPRAELEQMQRKSLEAYRRIFGVNMGDFVQGARIVLETLQRRLEH 427
[Close]
BLAST of mRNA_H-elongata_contig16726.4203.1 vs. uniprot
Match: A0A6H5KKV6_9PHAE (GT47 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKV6_9PHAE)

HSP 1 Score: 298 bits (763), Expect = 7.480e-97
Identity = 140/233 (60.09%), Postives = 178/233 (76.39%), Query Frame = 1 
Query:    1 GRAERPVVAASFAMEAASNMHTCYYRSGYDMSFPLFPHNVFPEVATTLPEDRRFFLTVKASLYLYGHGSEERMSLVPLHDEANGVIMALHCFEMHHEHLFPENLDYCQWLRERYDVYDYASVMNTTFGIVPAGRSPGSFRLPEVMSAGAIPVFVGRDLVPPFREQFDWESFSFMFSPDDVGPAMIKTLQSVPPEELRVMQQKSLDAYWKIFGGKTNSFESIARKVVDLLIRRI 699
            GRA RP VA SFAMEAA+NMHTC+YRSGYD+S PL P  V  ++A   P DR FFLT K +LY+ GHGSEER+SL+PL DE +GV++ +HCFE H EHL PEN ++CQ L+++Y+ YDY S+MN+TFG+VPAGR P ++RL EVMSAG IPVFVGRDLVPPF EQ DW S SF F+PD+V   M+KTL +VP  +L  MQ+KSL+AY K+FG   N F   A+ ++ ++ RR+
Sbjct:  190 GRASRPDVAGSFAMEAATNMHTCFYRSGYDISVPLAPRQVLHDLANVAPLDREFFLTTKCTLYVSGHGSEERISLLPLQDEEHGVVVTMHCFEEHQEHLLPENAEFCQALKDQYEGYDYRSLMNSTFGLVPAGRGPATYRLGEVMSAGTIPVFVGRDLVPPFMEQIDWPSISFAFTPDEVESRMMKTLLAVPRAQLEEMQRKSLEAYGKMFGADVNDFRPSAKIILGIIRRRL 422
[Close]
BLAST of mRNA_H-elongata_contig16726.4203.1 vs. uniprot
Match: D7G4H1_ECTSI (Glycosyltransferase, family GT47 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4H1_ECTSI)

HSP 1 Score: 293 bits (749), Expect = 5.410e-96
Identity = 145/235 (61.70%), Postives = 177/235 (75.32%), Query Frame = 1 
Query:    1 GRAERPVVAASFAMEAASNMHTCYYRSGYDMSFPLFPHNVFPEVATTLPEDRRFFLTVKASLYLYGHGSEERMSLVPLHDEANGVIMALHCFEMHHEHLFPENLDYCQWLRERYDVYDYASVMNTTFGIVPAGRSPGSFRLPEVMSAGAIPVFVGRDLVPPFREQFDWESFSFMFSPDDVGPAMIKTLQSVPPEELRVMQQKSLDAYWKIFGGKTNSFESIARKVVDLLIRRISY 705
            GR  RP+VA S+AMEAASNM TC+YRSG+D+S PL     F  +A     DR FFLT K SLYL  HGS ERMSLVPL DEANGVIM+LHCFE+H+EHL PEN++YC+ L +RY  + Y S+MN+TFG+VPAGRSPG+FRL EVMSAG+IPVFVG DLV PF+E  DW SFSF F+PD VGP M++TL++VP  EL  MQ+KSL A+ KIFG     F   AR ++ +L RR+ +
Sbjct:   97 GRGSRPIVAGSYAMEAASNMQTCFYRSGFDISVPLHSKKAFNNLADVAAWDRNFFLTTKGSLYLSRHGSGERMSLVPLQDEANGVIMSLHCFELHNEHLLPENVEYCRALSDRYGDHSYESLMNSTFGLVPAGRSPGTFRLGEVMSAGSIPVFVGWDLVLPFKELIDWSSFSFAFAPDQVGPQMVRTLRAVPRAELEQMQRKSLKAHRKIFGVDKGIFVPSARIMLKILQRRLGH 331
[Close]
BLAST of mRNA_H-elongata_contig16726.4203.1 vs. uniprot
Match: D7G4H3_ECTSI (Glycosyltransferase, family GT47 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4H3_ECTSI)

HSP 1 Score: 281 bits (718), Expect = 7.440e-93
Identity = 137/222 (61.71%), Postives = 171/222 (77.03%), Query Frame = 1 
Query:   40 MEAASNMHTCYYRSGYDMSFPLFPHNVFPEVATTLPEDRRFFLTVKASLYLYGHGSEERMSLVPLHDEANGVIMALHCFEMHHEHLFPENLDYCQWLRERYDVYDYASVMNTTFGIVPAGRSPGSFRLPEVMSAGAIPVFVGRDLVPPFREQFDWESFSFMFSPDDVGPAMIKTLQSVPPEELRVMQQKSLDAYWKIFGGKTNSFESIARKVVDLLIRRISY 705
            MEAASNMHTC+YRSG+D+S PL  +  F  +A     DR FFLT K +LYL GHGS ERMSLVPL DEANGVIM+LHCFE+H EHL PEN++YC+ L +RY  + Y S+MN+TFG+VPAGRSPG++RL EVMSAG+IPVFVG DLV PF+E  DW SFSF F+PD VGP M++TL++VP  EL  MQ+KSL A+ KIFG   + F   AR ++++L RR+ +
Sbjct:    1 MEAASNMHTCFYRSGFDISVPLPSNKAFNNLADVAAWDRNFFLTTKGTLYLSGHGSGERMSLVPLQDEANGVIMSLHCFEIHDEHLLPENVEYCRALSDRYGDHSYESLMNSTFGLVPAGRSPGTYRLGEVMSAGSIPVFVGWDLVLPFKELIDWSSFSFAFAPDQVGPQMVRTLRAVPRAELEQMQRKSLKAHGKIFGVDQDIFVPSARIMLEILQRRLGH 222
[Close]
BLAST of mRNA_H-elongata_contig16726.4203.1 vs. uniprot
Match: A0A6H5L9T2_9PHAE (GT47 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9T2_9PHAE)

HSP 1 Score: 280 bits (715), Expect = 2.080e-88
Identity = 135/235 (57.45%), Postives = 174/235 (74.04%), Query Frame = 1 
Query:    1 GRAERPVVAASFAMEAASNMHTCYYRSGYDMSFPLFPHNVFPEVATTLPEDRRFFLTVKASLYLYGHGSEERMSLVPLHDEANGVIMALHCFEMHHEHLFPENLDYCQWLRERYDVYDYASVMNTTFGIVPAGRSPGSFRLPEVMSAGAIPVFVGRDLVPPFREQFDWESFSFMFSPDDVGPAMIKTLQSVPPEELRVMQQKSLDAYWKIFGGKTNSFESIARKVVDLLIRRISY 705
            G+  RP ++ ++AM+ + +  +CYYRSGYD+S PL P  VFP+ A +   DR +FLT K +LYL G+G EER ++  +HD ANGV+  + C  MH +   PEN DYCQ  R+RYD+YDY  +MNTTF +VPAGRSPGSFRL EVMSAGAIPVFV RD + PF+EQ DW SFSF+FSPDDVGP M++TL++V P +L  MQ+KSL AYWKIFGG TN +  IA   +D+L++RI Y
Sbjct:  293 GQRARPHISNTYAMDWSFDALSCYYRSGYDLSLPLVPGKVFPDTAPSPAPDRDYFLTFKGTLYLRGYGLEERSAVSRVHDPANGVVSVIKCSNMHGDESLPENQDYCQRSRKRYDLYDYEKLMNTTFALVPAGRSPGSFRLGEVMSAGAIPVFVVRDWIKPFQEQIDWPSFSFVFSPDDVGPIMMETLRAVQPAQLLEMQRKSLRAYWKIFGGVTN-YSVIASNAIDMLVQRIGY 526
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BLAST of mRNA_H-elongata_contig16726.4203.1 vs. uniprot
Match: A0A6H5JRU9_9PHAE (GT47 protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JRU9_9PHAE)

HSP 1 Score: 254 bits (649), Expect = 1.950e-78
Identity = 127/234 (54.27%), Postives = 168/234 (71.79%), Query Frame = 1 
Query:    4 RAERPVVAASFAMEAASNMHTCYYRSGYDMSFPLFPHNVFPEVATTLPEDRRFFLTVKASLYLYGHGSEERMSLVPLHDEANGVIMALHCFEMHHEHLFPENLDYCQWLRERYDVYDYASVMNTTFGIVPAGRSPGSFRLPEVMSAGAIPVFVGRDLVPPFREQFDWESFSFMFSPDDVGPAMIKTLQSVPPEELRVMQQKSLDAYWKIFGGKTNSFESIARKVVDLLIRRISY 705
            R ++P++A S AM+A+SNM +C+YRSGYD + PL     F  +    P  R +FLTVK +LYL G G +ERMS+VPLH E  GVIM L+CFE+H EHL PEN ++C  L E    ++Y  +MNTTFG+VPAGR P ++RL EVMSAGAIPVFV RD+V PF E+ DW + SF F P++VGPAM+ TL+SV P EL  MQ+KS+ A+++IFG +   ++ IAR VVD L+ R+ Y
Sbjct:  302 RDKKPLIAGSAAMDASSNMRSCFYRSGYDFAVPLRHQWGFGNLTELAPWHRDYFLTVKGNLYLSGVGYDERMSVVPLHSEPEGVIMGLNCFELHDEHLLPENEEFCLALNETASRHEYEDLMNTTFGLVPAGRQPATYRLAEVMSAGAIPVFVSRDMVRPFPERVDWPTLSFSFPPEEVGPAMMDTLRSVTPAELLGMQRKSVQAFYEIFGEEPG-YDRIARVVVDELVLRVGY 534
[Close]
BLAST of mRNA_H-elongata_contig16726.4203.1 vs. uniprot
Match: D8LQY4_ECTSI (Glycosyltransferase, family GT47 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQY4_ECTSI)

HSP 1 Score: 232 bits (591), Expect = 1.330e-73
Identity = 110/179 (61.45%), Postives = 134/179 (74.86%), Query Frame = 1 
Query:   64 TCYYRSGYDMSFPLFPHNVFPEVATTLPEDRRFFLTVKASLYLYGHGSEERMSLVPLHDEANGVIMALHCFEMHHEHLFPENLDYCQWLRERYDVYDYASVMNTTFGIVPAGRSPGSFRLPEVMSAGAIPVFVGRDLVPPFREQFDWESFSFMFSPDDVGPAMIKTLQSVPPEELRVMQ 600
            +CYYRSGYD+S PL P  VFP+ A +   DR +FLT K +LYL G+G EER ++   HD ANGV+  + C  MH + + PEN DYCQ  R+RYD+YDY  +MNTTF +VPAGRSPGSFRL EVMSAGAIPVFV RD + PF+EQ DW SFSF+FSPDDVGP M++TL++V P  L  MQ
Sbjct:    9 SCYYRSGYDLSLPLVPGKVFPDTAPSPAPDRDYFLTFKGTLYLRGYGLEERSAVSRAHDPANGVVSVIKCSNMHGDDILPENQDYCQRSRKRYDLYDYEKLMNTTFALVPAGRSPGSFRLGEVMSAGAIPVFVVRDWIKPFQEQIDWPSFSFVFSPDDVGPIMMETLRAVEPARLLEMQ 187
[Close]
BLAST of mRNA_H-elongata_contig16726.4203.1 vs. uniprot
Match: D7G4H4_ECTSI (Glycosyltransferase, family GT47 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4H4_ECTSI)

HSP 1 Score: 200 bits (509), Expect = 9.450e-62
Identity = 101/177 (57.06%), Postives = 126/177 (71.19%), Query Frame = 1 
Query:   76 RSGYDMSFPLFPHNVFPEVATTLPEDRRFFLTVKASL--YLYGHGSEERMSLVPLHDEANGVIMALHCFEMHHEHLFPENLDYCQWLRERYDVYDYASVMNTTFGIVPAGRSPGSFRLPEVMSAGAIPVFVGRDLVPPFREQFDWESFSFMFSPDDVGPAMIKTLQSVPPEELRVMQ 600
            R+GYD+S PL P +VF ++A   P DRRFFLT   SL  YL  HGSEE M L+PL D+ NGV +++HCFE H +HL PEN ++ Q   + Y   DY S+MN+TFG+VPAG S G++RL EVMSAG+IPVFVGRDLVP F EQ DW S SF F+PD+V    + TL +VP E+L  MQ
Sbjct:    6 RTGYDISVPLAPRHVFHDLAKVAPWDRRFFLTTTCSLPGYLGEHGSEEWMGLIPLQDKENGVNLSMHCFENHQDHLLPENPEFRQAQTDHYQGQDYRSLMNSTFGLVPAGWSSGTYRLGEVMSAGSIPVFVGRDLVPSFMEQIDWNSISFAFTPDEVKSRTMSTLLAVPREQLERMQ 182
[Close]
BLAST of mRNA_H-elongata_contig16726.4203.1 vs. uniprot
Match: D8LNT2_ECTSI (Glycosyltransferase, family GT47 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNT2_ECTSI)

HSP 1 Score: 153 bits (386), Expect = 1.540e-39
Identity = 91/250 (36.40%), Postives = 130/250 (52.00%), Query Frame = 1 
Query:   37 AMEAASNMHTCYYRSGYDMSFPLFPHNVFPEVATTLPEDRRFFLTVKASLYLYGHGSEERMSLVPLHD-----------------EANG---------VIMALHCFEMHHEHLFPENLDYCQWLRERYDVY-DYASVMNTTFGIVPAGRSPGSFRLPEVMSAGAIPVFVGRDLVPPFREQFDWESFSFMFSPDDVGPAMIKTLQSVPPEELRVMQQKSLDAYWKIFGGKTNSFESIARKVVDLLIRRISY 705
            AM   SNM  CYYR GYD++ PL        +    P+DR++F T K  LYL G+G  ER +++ L                    ANG         V++   C   H E L   N   C+  +  YD    Y  +MNTTF ++PAGRSP ++RL E +SAGA+PVF+ +D V PF  +  W  FSF F P++V P M+KTL++VP  EL  MQ  +L+ +   FG      +++   V+D+L  R+ +
Sbjct:  340 AMFLQSNMRPCYYRHGYDIAMPLPARRPVERLREVAPQDRKYFATFKGKLYLSGNGLLERSAVLDLMSGGASAAAAPAEGRGEMGRANGDSQSSSSPDVLVVERCCNFHSEQLLSWNKAMCEASQREYDSSPSYGDLMNTTFALLPAGRSPATYRLAEALSAGALPVFIHQDFVKPFPGKIPWSDFSFSFPPEEV-PRMLKTLRAVPDRELAQMQATALEVFDTYFGP---GMDNMLHTVLDILEDRLYF 585
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig16726.4203.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G4H7_ECTSI1.430e-10160.43Glycosyltransferase, family GT47 n=1 Tax=Ectocarpu... [more]
A0A6H5JGQ8_9PHAE1.100e-9963.83GT47 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A6H5KKV6_9PHAE7.480e-9760.09GT47 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D7G4H1_ECTSI5.410e-9661.70Glycosyltransferase, family GT47 n=1 Tax=Ectocarpu... [more]
D7G4H3_ECTSI7.440e-9361.71Glycosyltransferase, family GT47 n=1 Tax=Ectocarpu... [more]
A0A6H5L9T2_9PHAE2.080e-8857.45GT47 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A6H5JRU9_9PHAE1.950e-7854.27GT47 protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A... [more]
D8LQY4_ECTSI1.330e-7361.45Glycosyltransferase, family GT47 n=1 Tax=Ectocarpu... [more]
D7G4H4_ECTSI9.450e-6257.06Glycosyltransferase, family GT47 n=1 Tax=Ectocarpu... [more]
D8LNT2_ECTSI1.540e-3936.40Glycosyltransferase, family GT47 n=1 Tax=Ectocarpu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig16726contigH-elongata_contig16726:3439..5715 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score307.4
Seed ortholog evalue5.9e-81
Seed eggNOG ortholog2880.D7G4H7
Preferred nameEXTL1
KEGG koko:K02366,ko:K02368,ko:K21988
KEGG TC1.A.17.4
KEGG ReactionR05935,R05936,R10138,R10139
KEGG Pathwayko00534,ko01100,map00534,map01100
KEGG ModuleM00059
GOsGO:0000003,GO:0000139,GO:0000271,GO:0000902,GO:0000904,GO:0001501,GO:0001503,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0005794,GO:0005975,GO:0005976,GO:0006022,GO:0006023,GO:0006024,GO:0006029,GO:0006040,GO:0006044,GO:0006082,GO:0006790,GO:0006807,GO:0006810,GO:0006897,GO:0006928,GO:0006935,GO:0006950,GO:0006986,GO:0006996,GO:0007005,GO:0007154,GO:0007165,GO:0007275,GO:0007276,GO:0007369,GO:0007399,GO:0007409,GO:0007411,GO:0007417,GO:0007420,GO:0007492,GO:0007498,GO:0008150,GO:0008152,GO:0008194,GO:0008354,GO:0008375,GO:0008589,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009605,GO:0009653,GO:0009790,GO:0009792,GO:0009888,GO:0009966,GO:0009967,GO:0009987,GO:0010033,GO:0010646,GO:0010647,GO:0012505,GO:0015012,GO:0015014,GO:0015020,GO:0016020,GO:0016021,GO:0016043,GO:0016051,GO:0016192,GO:0016477,GO:0016740,GO:0016757,GO:0016758,GO:0019538,GO:0019899,GO:0019953,GO:0021537,GO:0021772,GO:0021988,GO:0022008,GO:0022412,GO:0022414,GO:0023051,GO:0023052,GO:0023056,GO:0030030,GO:0030111,GO:0030154,GO:0030166,GO:0030176,GO:0030177,GO:0030182,GO:0030201,GO:0030202,GO:0030203,GO:0030210,GO:0030900,GO:0030968,GO:0031090,GO:0031175,GO:0031224,GO:0031227,GO:0031984,GO:0032501,GO:0032502,GO:0032504,GO:0032989,GO:0032990,GO:0033554,GO:0033692,GO:0034620,GO:0034637,GO:0034645,GO:0034976,GO:0035295,GO:0035966,GO:0035967,GO:0036465,GO:0036498,GO:0040011,GO:0042175,GO:0042221,GO:0042328,GO:0042330,GO:0042802,GO:0042803,GO:0043009,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044272,GO:0044281,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0045880,GO:0046982,GO:0046983,GO:0048311,GO:0048312,GO:0048468,GO:0048488,GO:0048513,GO:0048518,GO:0048522,GO:0048565,GO:0048583,GO:0048584,GO:0048598,GO:0048609,GO:0048666,GO:0048667,GO:0048699,GO:0048706,GO:0048731,GO:0048812,GO:0048856,GO:0048858,GO:0048869,GO:0048870,GO:0050508,GO:0050509,GO:0050789,GO:0050794,GO:0050808,GO:0050896,GO:0051179,GO:0051234,GO:0051640,GO:0051641,GO:0051646,GO:0051649,GO:0051674,GO:0051704,GO:0051716,GO:0055123,GO:0060322,GO:0060465,GO:0060828,GO:0061564,GO:0065007,GO:0070887,GO:0071310,GO:0071704,GO:0071840,GO:0072498,GO:0090092,GO:0090097,GO:0090098,GO:0090100,GO:0090263,GO:0097485,GO:0098588,GO:0098657,GO:0098791,GO:0098827,GO:0099003,GO:0099504,GO:0120036,GO:0120039,GO:1901071,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576,GO:1903510
EggNOG free text desc.macromolecule glycosylation
EggNOG OGsKOG1021@1,KOG1021@2759
EC2.4.1.224,2.4.1.225
COG Functional cat.S
CAZyGT47,GT64
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01003,ko02000
Hectar predicted targeting categoryother localisation
Exons4
Model size711
Cds size711
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig16726.4203.1prot_H-elongata_contig16726.4203.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig16726 3439..5715 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929976.8425164-CDS-H-elongata_contig16726:3438..35491622929976.8425164-CDS-H-elongata_contig16726:3438..3549Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16726 3439..3549 -
1691679231.6834261-CDS-H-elongata_contig16726:3438..35491691679231.6834261-CDS-H-elongata_contig16726:3438..3549Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16726 3439..3549 -
1622929976.8630931-CDS-H-elongata_contig16726:3913..40841622929976.8630931-CDS-H-elongata_contig16726:3913..4084Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16726 3914..4084 -
1691679231.6994593-CDS-H-elongata_contig16726:3913..40841691679231.6994593-CDS-H-elongata_contig16726:3913..4084Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16726 3914..4084 -
1622929976.8807411-CDS-H-elongata_contig16726:4823..50751622929976.8807411-CDS-H-elongata_contig16726:4823..5075Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16726 4824..5075 -
1691679231.7099605-CDS-H-elongata_contig16726:4823..50751691679231.7099605-CDS-H-elongata_contig16726:4823..5075Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16726 4824..5075 -
1622929976.9202163-CDS-H-elongata_contig16726:5538..57151622929976.9202163-CDS-H-elongata_contig16726:5538..5715Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16726 5539..5715 -
1691679231.725348-CDS-H-elongata_contig16726:5538..57151691679231.725348-CDS-H-elongata_contig16726:5538..5715Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16726 5539..5715 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig16726.4203.1

>prot_H-elongata_contig16726.4203.1 ID=prot_H-elongata_contig16726.4203.1|Name=mRNA_H-elongata_contig16726.4203.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=237bp
GRAERPVVAASFAMEAASNMHTCYYRSGYDMSFPLFPHNVFPEVATTLPE
DRRFFLTVKASLYLYGHGSEERMSLVPLHDEANGVIMALHCFEMHHEHLF
PENLDYCQWLRERYDVYDYASVMNTTFGIVPAGRSPGSFRLPEVMSAGAI
PVFVGRDLVPPFREQFDWESFSFMFSPDDVGPAMIKTLQSVPPEELRVMQ
QKSLDAYWKIFGGKTNSFESIARKVVDLLIRRISYS*
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mRNA from alignment at H-elongata_contig16726:3439..5715-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig16726.4203.1 ID=mRNA_H-elongata_contig16726.4203.1|Name=mRNA_H-elongata_contig16726.4203.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2277bp|location=Sequence derived from alignment at H-elongata_contig16726:3439..5715- (Himanthalia elongata Himel1 dioecious)
GGCAGAGCGGAGCGCCCCGTGGTTGCGGCCTCATTTGCGATGGAGGCGGC
AAGCAACATGCACACGTGCTACTACAGGTCCGGGTACGACATGTCGTTCC
CTCTGTTTCCCCACAACGTGTTCCCCGAGGTGGCGACTACGCTCCCCGAG
GATAGACGTTTCTTCCTCACGGTCAAGGTGTGCAGGTGTTCTTGTTTGTT
GATGAGTCTAAATATTTGCGGAGGAGATGGGTGGGGGGCCGGGGGGTTCT
CGTTCGTTGTTTCTTGTGTTTTGACCCACGCCATGAGTTCGTTGCTCCCC
GTATGTAGACATCTGTCTACAGGAAGAAAGTTTAAAGCTGCGATACGACT
GGTAGTTTTCCTGTTGAGCAAACACGTATACGAAACTACAGCTACAGCTA
CGTACAAGAAGTTAGGCACCTCTTCTTGCAGGGCAAGCGGCATTCGGCAA
TCTTCCTCTGGCCTTAGTTCGCGGTTGATGGGTTTTCCGCGAAAATTGTA
TGTGCGTTTTGGTTTTGGTGCGTCGGCTTGCAACAATTGCAGCATACTTC
AAGTGCAAAATAAAATTGTATTTTCCGTGGATGCCTCAACCCCAGTCCCC
AAAACAATATGCGACCGTTTTTTATATATGTGCTCCTTAGGCCAGTCTTT
ATCTCTATGGACACGGTTCCGAAGAGAGGATGAGCCTGGTGCCTCTTCAC
GACGAGGCGAACGGGGTGATCATGGCTCTACACTGCTTCGAGATGCACCA
CGAGCATCTATTCCCGGAGAACCTCGATTACTGCCAATGGCTTCGCGAGC
GTTACGATGTCTACGATTATGCAAGCGTCATGAACACCACATTCGGCATA
GTTCCCGCTGGCAGATCTCCTGGTTCATTCCGACTCCCCGAGGTACGTGC
TGACTTGCCTGGTAGTAGGCATGGTGGGAATCTAAGGCCTTGGACTACAA
AGTAAAAAAGTATGTGCCGTAAAAATGGGGGATGGGGGACACAAACTATA
TGGAGGTGTTCGAAGCGTCCCATAAGGAGGCGCATCCGAATACCTTGATG
TTTGTTTTTCACACACGAAAATGTAAGCATGCATCGAATCGGAATAGTTA
GTTGTTGCTTTTTAAACAGCATTTCGGGTAGGAACCTTAATTTTTAGCCG
GTCTGTATATTCCGTTCGGTCGCGATTCAGCAAAAATCGTTAAATTTTTT
GTTCCTAGGACTTGGGGCCTGCGGCGACGGGGTTTTTATACCTCTTTTGC
GTACTGTTTTATACCTGTCTCTGGATCATCAAAAAGCGAAGCCATGAGGG
AACACAAGAAACAAGAACATCTCGTCGTGCGAAGGAAAATAACACGAAGT
AGTCTAATATTTTTTACGCATATACCTATAACGTAAGAATTACGCCACAA
GCATGTTATGTTTACCTCATAATATAGGGTTTCCACGTTTTATAAAAAGT
GTATGAAAAGAATGCACTAAAGTGAAAAGGAACCTAAACTAGTCTGCCAG
TGGCGGACTAGTTTAGGTTCCTGTTCACCTTAGTGCATGTTTTTCATGCA
TTGTTTGTAACACGTGGAAACCCTGTAATATATTACCAAATATTAATCTA
CCTACCCCCCACCCACGCTCTTGCTTTGCAGGTTATGAGCGCCGGAGCCA
TTCCAGTTTTTGTCGGGAGGGATCTTGTTCCGCCGTTCCGAGAGCAGTTC
GACTGGGAATCGTTCTCGTTTATGTTCTCGCCTGATGATGTCGGACCGGC
AATGATTAAAACGCTTCAGAGTGTCCCTCCGGAAGAGCTCAGGGTGATGC
AGGTAGGCTGTTTTTTGAAAACCACAGAGCAAGTTAGGAACCCTTTTGCA
TTCAAACGAGCTCTTTTGTGTTTACCCTCTAGTGGAGATCGCTGTTCATG
TCGTATTTCAGCATTTGAAGGTCGTTTTCCCTGGGAAGGGATGGGGCCAG
GGAGCGAGAAAACCCGGTTTCGGTATCCTCCTCAAAGTAATCGAAAGCAG
GATCGGACATTGGATCCATTTACCTTTTTATTCGGGTTGGGCAGAGATCT
GTGTGGCCAAACAAAAAGCGCTCTCTCCTGCTTATTCCGCCCGTCATTTC
CTTTCTCGTTCGATTGCCTGCCACCTGCCCGTTTATATGACCTCGCTCTG
GGGGGGGGGACACTAGCAAAAATCGTTGGATGCGTACTGGAAGATCTTCG
GTGGCAAGACTAACAGCTTCGAGTCCATCGCTCGCAAAGTCGTGGACCTG
CTCATCCGGCGAATCTCTTACTCCTAA
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Coding sequence (CDS) from alignment at H-elongata_contig16726:3439..5715-

>mRNA_H-elongata_contig16726.4203.1 ID=mRNA_H-elongata_contig16726.4203.1|Name=mRNA_H-elongata_contig16726.4203.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1422bp|location=Sequence derived from alignment at H-elongata_contig16726:3439..5715- (Himanthalia elongata Himel1 dioecious)
GGCAGAGCGGAGCGCCCCGTGGTTGCGGCCTCATTTGCGATGGAGGCGGC
AAGCAACATGCACACGTGCTACTACAGGTCCGGGTACGACATGTCGTTCC
CTCTGTTTCCCCACAACGTGTTCCCCGAGGTGGCGACTACGCTCCCCGAG
GATAGACGTTTCTTCCTCACGGTCAAGGGCAGAGCGGAGCGCCCCGTGGT
TGCGGCCTCATTTGCGATGGAGGCGGCAAGCAACATGCACACGTGCTACT
ACAGGTCCGGGTACGACATGTCGTTCCCTCTGTTTCCCCACAACGTGTTC
CCCGAGGTGGCGACTACGCTCCCCGAGGATAGACGTTTCTTCCTCACGGT
CAAGGCCAGTCTTTATCTCTATGGACACGGTTCCGAAGAGAGGATGAGCC
TGGTGCCTCTTCACGACGAGGCGAACGGGGTGATCATGGCTCTACACTGC
TTCGAGATGCACCACGAGCATCTATTCCCGGAGAACCTCGATTACTGCCA
ATGGCTTCGCGAGCGTTACGATGTCTACGATTATGCAAGCGTCATGAACA
CCACATTCGGCATAGTTCCCGCTGGCAGATCTCCTGGTTCATTCCGACTC
CCCGAGGCCAGTCTTTATCTCTATGGACACGGTTCCGAAGAGAGGATGAG
CCTGGTGCCTCTTCACGACGAGGCGAACGGGGTGATCATGGCTCTACACT
GCTTCGAGATGCACCACGAGCATCTATTCCCGGAGAACCTCGATTACTGC
CAATGGCTTCGCGAGCGTTACGATGTCTACGATTATGCAAGCGTCATGAA
CACCACATTCGGCATAGTTCCCGCTGGCAGATCTCCTGGTTCATTCCGAC
TCCCCGAGGTTATGAGCGCCGGAGCCATTCCAGTTTTTGTCGGGAGGGAT
CTTGTTCCGCCGTTCCGAGAGCAGTTCGACTGGGAATCGTTCTCGTTTAT
GTTCTCGCCTGATGATGTCGGACCGGCAATGATTAAAACGCTTCAGAGTG
TCCCTCCGGAAGAGCTCAGGGTGATGCAGGTTATGAGCGCCGGAGCCATT
CCAGTTTTTGTCGGGAGGGATCTTGTTCCGCCGTTCCGAGAGCAGTTCGA
CTGGGAATCGTTCTCGTTTATGTTCTCGCCTGATGATGTCGGACCGGCAA
TGATTAAAACGCTTCAGAGTGTCCCTCCGGAAGAGCTCAGGGTGATGCAG
CAAAAATCGTTGGATGCGTACTGGAAGATCTTCGGTGGCAAGACTAACAG
CTTCGAGTCCATCGCTCGCAAAGTCGTGGACCTGCTCATCCGGCGAATCT
CTTACTCCTAACAAAAATCGTTGGATGCGTACTGGAAGATCTTCGGTGGC
AAGACTAACAGCTTCGAGTCCATCGCTCGCAAAGTCGTGGACCTGCTCAT
CCGGCGAATCTCTTACTCCTAA
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