mRNA_H-elongata_contig167234.4201.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig167234.4201.1 vs. uniprot
Match: D8LNT7_ECTSI (AB hydrolase-1 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNT7_ECTSI) HSP 1 Score: 259 bits (661), Expect = 5.990e-83 Identity = 130/172 (75.58%), Postives = 141/172 (81.98%), Query Frame = 1
Query: 4 VDATNWGETQNIIEAIHKMPLEGLGSRRDADERLSKDVVDPALRAFAVTNLDKNNASGRWGWRINIDAIQRSKGELARFGSGARGGEGGLQRLAGGDSGH---DELPPYSGDTLFIAGGNSRYVRSQHLQEIRKRFPRFVISTVKGAGHWVHADSPEETLRLVKSFLDRPEL 510
VDATNWGETQ IIEAIHKMPLEG+ SRRDADE L+KD+VDPALRAFAVTNLDK+ ASG W WRINIDAIQRS G LA+F SG R E RL GG G DEL Y GD LF+AGGNSRY+RSQHL+EI K FPRFV+ST+KGAGHWVHAD+P ETLRL KSFLDRPEL
Sbjct: 225 VDATNWGETQKIIEAIHKMPLEGVTSRRDADELLAKDIVDPALRAFAVTNLDKDPASGGWAWRINIDAIQRSMGVLAQFDSGKRHQEEIDGRLKGGGRGDGDADELGAYKGDALFVAGGNSRYIRSQHLKEIGKLFPRFVVSTIKGAGHWVHADNPTETLRLAKSFLDRPEL 396
BLAST of mRNA_H-elongata_contig167234.4201.1 vs. uniprot
Match: A0A836CHF5_9STRA (Alpha/Beta hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHF5_9STRA) HSP 1 Score: 146 bits (368), Expect = 1.600e-39 Identity = 82/171 (47.95%), Postives = 99/171 (57.89%), Query Frame = 1
Query: 4 VDATNWGETQNIIEAIHKMPLEGLGSRRDADERLSKDVVDPALRAFAVTNLDKNN-ASGRWGWRINIDAIQRSKGELARFGSGARGGEGGLQRLAGGDSGHDELPPYSGDTLFIAGGNSRYVRSQHLQEIRKRFPRFVISTVKGAGHWVHADSPEETLRLVKSFLDRPELP 513
VD TNWGETQ IIEAI K+ + G+ SRRDAD L KD+VDP +RAFAVTNL+K+ A+G WGWRIN+ AI + LA+F + G D+ L + GDTLFIAG FPR + T+ AGHWVHAD P T VK +LDR E P
Sbjct: 208 VDQTNWGETQRIIEAITKLDISGVTSRRDADGLLEKDIVDPMIRAFAVTNLEKDEGAAGGWGWRINVPAIHKGLSGLAQF-----------EVKPGKDASKAGLK-FQGDTLFIAGA---------------LFPRHTLQTLPKAGHWVHADDPAGTQGAVKMYLDRAECP 351
BLAST of mRNA_H-elongata_contig167234.4201.1 vs. uniprot
Match: A0A7S3RPR9_9SPIT (Hypothetical protein n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3RPR9_9SPIT) HSP 1 Score: 128 bits (322), Expect = 3.970e-34 Identity = 62/168 (36.90%), Postives = 93/168 (55.36%), Query Frame = 1
Query: 7 DATNWGETQNIIEAIHKMPLEGLGSRRDADERLSKDVVDPALRAFAVTNLDKNNASGRWGWRINIDAIQRSKGELARFGSGARGGEGGLQRLAGGDSGHDELPPYSGDTLFIAGGNSRYVRSQHLQEIRKRFPRFVISTVKGAGHWVHADSPEETLRLVKSFLDRPEL 510
D T WG+ II + K+ ++ + + +AD L++ V D LRAF + NL + + G + WRIN++ I S +LA + G +LP Y G+TLF+ GG S+YVRS HL I+++F F IS ++ A HW+HAD PE L + +FLD P +
Sbjct: 61 DGTGWGDNVKIINQLRKLDVQNIKKKSEADAILARHVQDAGLRAFVLMNLVRRSGEG-FAWRINLEGIANSLDDLADWDFG-------------------DLPRYDGNTLFVTGGQSKYVRSSHLANIQEQFVHFSISKIRNANHWIHADEPEALLVITSNFLDVPSV 208
BLAST of mRNA_H-elongata_contig167234.4201.1 vs. uniprot
Match: A0A8J2SGQ7_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SGQ7_9STRA) HSP 1 Score: 130 bits (328), Expect = 5.500e-34 Identity = 67/170 (39.41%), Postives = 98/170 (57.65%), Query Frame = 1
Query: 7 DATNWGETQNIIEAIHKMPLEGL-GSRRDADERLSKDVVDPALRAFAVTNLDKNNASGRWGWRINIDAIQRSKGELARFGSGARGGEGGLQRLAGGDSGHDELP-PYSGDTLFIAGGNSRYVRSQHLQEIRKRFPRFVISTVKGAGHWVHADSPEETLRLVKSFLDRPEL 510
D +NW + + +I+A+ + L+ G R+ AD L++ V+DP LRAFA+TNL + + W+ ++D I R +AR+ LP Y+GDTLF+ G SRYVRS HLQEI +FPRF + ++ GHWVHA+ P+ET +V+ FLDR E+
Sbjct: 162 DGSNWKKNRELIDALQNLDLDACAGDRKRADSLLAQRVLDPNLRAFALTNLQLRDE--QLSWQFDLDGIVRDLDNIARW---------------------PTLPGTYNGDTLFVKGQRSRYVRSIHLQEISSKFPRFTLQSIDDCGHWVHAEKPQETCDVVREFLDRDEV 308
BLAST of mRNA_H-elongata_contig167234.4201.1 vs. uniprot
Match: A0A7S1BFS3_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BFS3_9STRA) HSP 1 Score: 130 bits (326), Expect = 4.500e-33 Identity = 67/162 (41.36%), Postives = 98/162 (60.49%), Query Frame = 1
Query: 16 NWGETQNIIEAIHKMPLEGLGSRRDADERLSKDVVDPALRAFAVTNLDKNNASGRWGWRINIDAIQRSKGELARFGSGARGGEGGLQRLAGGDSGHDELPPYSGDTLFIAGGNSRYVRSQHLQEIRKRFPRFVISTVKGAGHWVHADSPEETLRLVKSFLDR 501
+W ++II+A+ + G S+RDAD+ L + D ALRAF +TNL+ SG W+INI AI R E+A F + D D+ P Y GDT +I GG SRYVR H+ I + FP +++TV+GAGHWVHA++P++T+ L+K++L+R
Sbjct: 233 SWANIRSIIDAMQSIDFSG--SKRDADQLLRSHIDDLALRAFVLTNLEDLRESGGVRWKINIGAISRRLHEIADFDIFSLDD----------DCLSDDHPVYHGDTFYINGGVSRYVRHSHMPTIGQLFPNHMLTTVRGAGHWVHAEAPDDTIALLKTYLER 382
BLAST of mRNA_H-elongata_contig167234.4201.1 vs. uniprot
Match: A0A7S3JV39_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JV39_9STRA) HSP 1 Score: 124 bits (311), Expect = 5.150e-33 Identity = 60/165 (36.36%), Postives = 94/165 (56.97%), Query Frame = 1
Query: 7 DATNWGETQNIIEAIHKMPLEGLGSRRDADERLSKDVVDPALRAFAVTNLDKNNASGRWGWRINIDAIQRSKGELARFGSGARGGEGGLQRLAGGDSGHDELPPYSGDTLFIAGGNSRYVRSQ-HLQEIRKRFPRFVISTVKGAGHWVHADSPEETLRLVKSFLD 498
D + W ++IIEA++ + L+ L RRDAD +L+ D++DP +RAFA++NL ++ + + W+ N+ A+ + +A + + G ++G TLF+AG NSRY+R HL I+ FP F + TV AGHW+HA+ PE T V+ FLD
Sbjct: 10 DGSQWRSNRHIIEAMYNLNLDILKDRRDADTKLANDILDPNIRAFALSNLAQDAVTKKLSWKCNLKALLANLDAMASWEKKQQSGF------------------FNGPTLFLAGANSRYIRGNVHLDAIKSSFPNFALRTVPNAGHWIHAEQPETTQDFVREFLD 156
BLAST of mRNA_H-elongata_contig167234.4201.1 vs. uniprot
Match: A0A7S2H8B1_9STRA (Hypothetical protein n=2 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2H8B1_9STRA) HSP 1 Score: 128 bits (322), Expect = 9.190e-33 Identity = 66/163 (40.49%), Postives = 96/163 (58.90%), Query Frame = 1
Query: 16 NWGETQNIIEAIHKMPLEGLGSRRDADERLSKDVVDPALRAFAVTNLDKNNASGRWGWRINIDAIQRSKGELARFGSGARGGEGGLQRLAGGDSG-HDELPPYSGDTLFIAGGNSRYVRSQHLQEIRKRFPRFVISTVKGAGHWVHADSPEETLRLVKSFLDR 501
+W +II+AI ++ L ++RD D L V DPALRAF +TNL++ + W+INI+AI +A F + DS +D+LP Y GDT I GG SR+VR H+ I FP +++T++GAGHWVHA++P++TL L+K +LDR
Sbjct: 192 SWNAVSSIIQAISQVQLTPGKTKRDVDSDLRHAVSDPALRAFVLTNLEQIRSDNSLRWKININAILAQLDTIAGFDIHHND-------VTSADSAKNDQLPKYEGDTFIIHGGASRFVRHAHMATIADYFPNHMLTTIRGAGHWVHAEAPDDTLVLLKQYLDR 347
BLAST of mRNA_H-elongata_contig167234.4201.1 vs. uniprot
Match: A0A8J9TAV7_PHATR (Hypothetical protein n=1 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9TAV7_PHATR) HSP 1 Score: 124 bits (310), Expect = 2.030e-32 Identity = 66/165 (40.00%), Postives = 96/165 (58.18%), Query Frame = 1
Query: 7 DATNWGETQNIIEAIHKMPLEGLGSRRDADERLSKDVVDPALRAFAVTNLDKNNASGRWGWRINIDAIQRSKGELARFGSGARGGEGGLQRLAGGDSGHDELPPYSGDTLFIAGGNSRYVRSQHLQEIRKRFPRFVISTVKGAGHWVHADSPEETLRLVKSFLDR 501
D +W Q+I+ + + L+ ++R DE+L + DPALRAF +TN+D A+GRW +I++DAI L+RLAG D D+ Y GDT I G SR+VR ++ IR FP +++T++GAGHWVHA++PE+T L+K FLDR
Sbjct: 62 DEPHWKAVQDIVHVLQTIELKSGVTKRSVDEQLRVGIPDPALRAFCLTNIDF--ATGRW--KIHLDAIASQ-----------------LERLAGFDV--DDSLQYEGDTFIIHGQQSRFVRHAYMDTIRSYFPNHMLTTIRGAGHWVHAEAPEDTTALLKRFLDR 203
BLAST of mRNA_H-elongata_contig167234.4201.1 vs. uniprot
Match: B7G4V4_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G4V4_PHATC) HSP 1 Score: 125 bits (313), Expect = 3.140e-32 Identity = 66/165 (40.00%), Postives = 96/165 (58.18%), Query Frame = 1
Query: 7 DATNWGETQNIIEAIHKMPLEGLGSRRDADERLSKDVVDPALRAFAVTNLDKNNASGRWGWRINIDAIQRSKGELARFGSGARGGEGGLQRLAGGDSGHDELPPYSGDTLFIAGGNSRYVRSQHLQEIRKRFPRFVISTVKGAGHWVHADSPEETLRLVKSFLDR 501
D +W Q+I+ + + L+ ++R DE+L D+ DPALRAF +TN+D +GRW +I++DAI L+RLAG D D+ Y GDT I G SR+VR ++ IR FP +++T++GAGHWVHA++PE+T L+K FLDR
Sbjct: 120 DEPHWKAVQDIVHVLQTIELKSGVTKRSVDEQLRVDIPDPALRAFCLTNIDFT--TGRW--KIHLDAIASQ-----------------LERLAGFDV--DDSLQYEGDTFIIHGQQSRFVRHAYMDTIRSYFPNHMLTTIRGAGHWVHAEAPEDTTALLKRFLDR 261
BLAST of mRNA_H-elongata_contig167234.4201.1 vs. uniprot
Match: I2CPM3_NANGC (Alpha beta hydrolase fold protein n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CPM3_NANGC) HSP 1 Score: 123 bits (308), Expect = 5.720e-32 Identity = 61/165 (36.97%), Postives = 92/165 (55.76%), Query Frame = 1
Query: 7 DATNWGETQNIIEAIHKMPLEGLGSRRDADERLS-KDVVDPALRAFAVTNLDKNNASGRWGWRINIDAIQRSKGELARFGSGARGGEGGLQRLAGGDSGHDELPPYSGDTLFIAGGNSRYVRSQHLQEIRKRFPRFVISTVKGAGHWVHADSPEETLRLVKSFLD 498
D TNW +T +I + +PL L ++ + D L K ++D +RAFA+TN+ + A RW IN+ I+ + E+A F GGD Y TLF+ GG S+Y+R+ HL I + FP F ++T++ AGHWVHA+ PEETL +++ +LD
Sbjct: 62 DGTNWQDTHEVISLLSSLPLSSLSTKNEVDRALQEKGLLDGGMRAFALTNVVQGEAGVRW--EINLAGIESALPEIAAFD-------------VGGDDSTSCSTAYPHKTLFLNGGKSKYLRTAHLSTIAQLFPTFSLATIRDAGHWVHAEKPEETLNIIQRYLD 211 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig167234.4201.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig167234.4201.1 >prot_H-elongata_contig167234.4201.1 ID=prot_H-elongata_contig167234.4201.1|Name=mRNA_H-elongata_contig167234.4201.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=172bp RVDATNWGETQNIIEAIHKMPLEGLGSRRDADERLSKDVVDPALRAFAVTback to top mRNA from alignment at H-elongata_contig167234:194..1305- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig167234.4201.1 ID=mRNA_H-elongata_contig167234.4201.1|Name=mRNA_H-elongata_contig167234.4201.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1112bp|location=Sequence derived from alignment at H-elongata_contig167234:194..1305- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig167234:194..1305- >mRNA_H-elongata_contig167234.4201.1 ID=mRNA_H-elongata_contig167234.4201.1|Name=mRNA_H-elongata_contig167234.4201.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1032bp|location=Sequence derived from alignment at H-elongata_contig167234:194..1305- (Himanthalia elongata Himel1 dioecious)back to top |