prot_H-elongata_contig16721.4200.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig16721.4200.1
Unique Nameprot_H-elongata_contig16721.4200.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length109
Homology
BLAST of mRNA_H-elongata_contig16721.4200.1 vs. uniprot
Match: D8LM23_ECTSI (Protein MCM10 homolog n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM23_ECTSI)

HSP 1 Score: 164 bits (414), Expect = 2.260e-46
Identity = 79/106 (74.53%), Postives = 92/106 (86.79%), Query Frame = 0
Query:    2 VPMRALESQDPSDAWAALGVLVSKSTRRQAANGGSYVIWTLSDLSRKDHDVSVFLFREALGSHWTTCEGTLVAVMSAKVLPPNGSTGGGGKNDHRLALSVDAPWQV 107
            VP RALESQDP+DAWAA+GVLVSKS RRQAANGGS+ +WTLSDLSR++++VS+FLF+EALGSHWT CEGTL+AV+ AKVLP  G  GGGG    RLA SVD+PWQV
Sbjct:   19 VPPRALESQDPADAWAAVGVLVSKSPRRQAANGGSFSVWTLSDLSRRENEVSLFLFQEALGSHWTVCEGTLIAVVGAKVLPDKG--GGGGNAPQRLAFSVDSPWQV 122          
BLAST of mRNA_H-elongata_contig16721.4200.1 vs. uniprot
Match: A0A6H5KS36_9PHAE (Protein MCM10 homolog n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KS36_9PHAE)

HSP 1 Score: 161 bits (407), Expect = 8.350e-44
Identity = 78/106 (73.58%), Postives = 91/106 (85.85%), Query Frame = 0
Query:    2 VPMRALESQDPSDAWAALGVLVSKSTRRQAANGGSYVIWTLSDLSRKDHDVSVFLFREALGSHWTTCEGTLVAVMSAKVLPPNGSTGGGGKNDHRLALSVDAPWQV 107
            VP RALESQDP+DAWAA+GVLVSKS RRQAANGGS+ +WTLSDLSR++++VS+FLF+EALGSHWT CEGTL+AV+ AKVLP  G  G GG    RLA SVD+PWQV
Sbjct:  132 VPPRALESQDPADAWAAVGVLVSKSPRRQAANGGSFSVWTLSDLSRRENEVSLFLFQEALGSHWTVCEGTLIAVVGAKVLPDKG--GDGGNAPQRLAFSVDSPWQV 235          
BLAST of mRNA_H-elongata_contig16721.4200.1 vs. uniprot
Match: A0A835YRW3_9STRA (Protein MCM10 homolog n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRW3_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 3.210e-16
Identity = 41/106 (38.68%), Postives = 62/106 (58.49%), Query Frame = 0
Query:    2 VPMRALESQDPSDAWAALGVLVSKSTRRQAANGGSYVIWTLSDLSRKDHDVSVFLFREALGSHWTTCEGTLVAVMSAKVLPPNGSTGGGGKNDHRLALSVDAPWQV 107
            +  +ALES DP  AWA +GVLV KS +R  ++G  +V W LS L+    + ++ L ++AL SHW+ CEG+++ ++ A  LP    +  G      L  + DA WQV
Sbjct:   38 IARQALESTDPMHAWATVGVLVRKSQQRDTSSGKPFVKWGLSGLAAGSKESTLLLSKDALSSHWSICEGSVLMLLGAHALPKQEQSSAGDP----LVFAADASWQV 139          
BLAST of mRNA_H-elongata_contig16721.4200.1 vs. uniprot
Match: K3WDI7_GLOUD (zf-primase domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WDI7_GLOUD)

HSP 1 Score: 68.6 bits (166), Expect = 3.060e-11
Identity = 31/67 (46.27%), Postives = 49/67 (73.13%), Query Frame = 0
Query:   16 WAALGVLVSKSTRRQAANGGSYVIWTLSDLSRKDHDVSVFLFREALGSHWTTCEGTLVAVMSAKVLP 82
            W  +GVL  K+  + AA+GGS+++W+LSDL+  D ++ VFLF +A  +HW   EG++VAV++A +LP
Sbjct:  151 WVTIGVLSRKTMSKAAASGGSFMVWSLSDLN--DTELGVFLFGDAYEAHWKEIEGSIVAVLNAALLP 215          
BLAST of mRNA_H-elongata_contig16721.4200.1 vs. uniprot
Match: A0A5D6Y137_9STRA (zf-primase domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y137_9STRA)

HSP 1 Score: 67.4 bits (163), Expect = 7.410e-11
Identity = 39/116 (33.62%), Postives = 66/116 (56.90%), Query Frame = 0
Query:    2 VPMRALESQ------DPSDAWAALGVLVSKSTRRQAANGGSYVIWTLSDLSRKDHDVSVFLFREALGSHWTTCEGTLVAVMSAKVLPPNGSTGGGGKNDHR---LALSVDAPWQVC 108
            +P+ +L+++      D +  WA +GVL  K+  + AANG ++++W+LSDL+  +  ++VFLF  A  +HW   EG +VAV++A +LP         K  H    +AL   A + +C
Sbjct:   86 LPLHSLDTEPRSTFTDDTMDWATIGVLTRKTLSKAAANGATFMVWSLSDLNGTE--LAVFLFDAAYEAHWREVEGAVVAVLNAALLPATEKNRFAFKVAHANEVVALGRAADFGIC 199          
BLAST of mRNA_H-elongata_contig16721.4200.1 vs. uniprot
Match: A0A662WYA4_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WYA4_9STRA)

HSP 1 Score: 61.2 bits (147), Expect = 1.040e-8
Identity = 27/67 (40.30%), Postives = 45/67 (67.16%), Query Frame = 0
Query:   16 WAALGVLVSKSTRRQAANGGSYVIWTLSDLSRKDHDVSVFLFREALGSHWTTCEGTLVAVMSAKVLP 82
            W  +GVL+ K+  +  ANG ++++W LSDL+  +  + VFLF +A  +HW    G++VA+M+A +LP
Sbjct:  119 WLTIGVLIRKTLSKPTANGSTFMVWGLSDLTGTE--LGVFLFDDAYAAHWKELTGSVVALMNAALLP 183          
BLAST of mRNA_H-elongata_contig16721.4200.1 vs. uniprot
Match: A0A0R3WEJ2_TAEAS (Protein MCM10 homolog n=1 Tax=Taenia asiatica TaxID=60517 RepID=A0A0R3WEJ2_TAEAS)

HSP 1 Score: 52.4 bits (124), Expect = 1.580e-5
Identity = 29/91 (31.87%), Postives = 50/91 (54.95%), Query Frame = 0
Query:   19 LGVLVSKSTRRQAANGGSYVIWTLSDL------SRKDHDVSVFLFREALGSHWTTCEGTLVAVMSAKVLPPNGSTGGGGKNDHRLALSVDA 103
            +GV+ SK    ++ N   + IW L+DL      +   H++++FLF       W   EGT+VA++  K+LPPN ++     N   L+++VD+
Sbjct:  602 VGVIGSKMPPHRSRNNKIFSIWRLTDLMSVGTGAPNGHNINLFLFGAVHEKLWKEPEGTVVAILKPKLLPPNENSNLTSTNGTVLSITVDS 692          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig16721.4200.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D8LM23_ECTSI2.260e-4674.53Protein MCM10 homolog n=1 Tax=Ectocarpus siliculos... [more]
A0A6H5KS36_9PHAE8.350e-4473.58Protein MCM10 homolog n=1 Tax=Ectocarpus sp. CCAP ... [more]
A0A835YRW3_9STRA3.210e-1638.68Protein MCM10 homolog n=1 Tax=Tribonema minus TaxI... [more]
K3WDI7_GLOUD3.060e-1146.27zf-primase domain-containing protein n=1 Tax=Globi... [more]
A0A5D6Y137_9STRA7.410e-1133.62zf-primase domain-containing protein n=1 Tax=Pythi... [more]
A0A662WYA4_9STRA1.040e-840.30Uncharacterized protein (Fragment) n=1 Tax=Nothoph... [more]
A0A0R3WEJ2_TAEAS1.580e-531.87Protein MCM10 homolog n=1 Tax=Taenia asiatica TaxI... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.40.50.140coord: 2..108
e-value: 1.2E-20
score: 75.8
IPR040184Minichromosome maintenance protein 10PANTHERPTHR13454FAMILY NOT NAMEDcoord: 9..106

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig16721contigH-elongata_contig16721:2110..2436 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig16721.4200.1mRNA_H-elongata_contig16721.4200.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig16721 2110..2454 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig16721.4200.1 ID=prot_H-elongata_contig16721.4200.1|Name=mRNA_H-elongata_contig16721.4200.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=109bp
MVPMRALESQDPSDAWAALGVLVSKSTRRQAANGGSYVIWTLSDLSRKDH
DVSVFLFREALGSHWTTCEGTLVAVMSAKVLPPNGSTGGGGKNDHRLALS
VDAPWQVC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR040184Mcm10