prot_H-elongata_contig166907.4187.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig166907.4187.1
Unique Nameprot_H-elongata_contig166907.4187.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length78
Homology
BLAST of mRNA_H-elongata_contig166907.4187.1 vs. uniprot
Match: A0A6H5KRN7_9PHAE (Thioesterase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KRN7_9PHAE)

HSP 1 Score: 95.1 bits (235), Expect = 2.300e-22
Identity = 40/60 (66.67%), Postives = 46/60 (76.67%), Query Frame = 0
Query:   17 VERQQNVSWKRWVDLTHRVSNASARLFCCPWAGGNSSAFDAWPARLHGVEVIPLLLPGRL 76
            VE +  ++W+ WVDL HRV  ASARLFCCPWAGGNS  F+ W   L GVEV+PLLLPGRL
Sbjct:   98 VEHEHILAWRAWVDLRHRVPKASARLFCCPWAGGNSLMFERWSEELPGVEVVPLLLPGRL 157          
BLAST of mRNA_H-elongata_contig166907.4187.1 vs. uniprot
Match: A0A7S3UXQ5_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UXQ5_HETAK)

HSP 1 Score: 58.2 bits (139), Expect = 4.200e-8
Identity = 25/60 (41.67%), Postives = 36/60 (60.00%), Query Frame = 0
Query:   18 ERQQNVS-WKRWVDLTHRVSNASARLFCCPWAGGNSSAFDAWPARLHGVEVIPLLLPGRL 76
            E+QQ+ S WK+W        +A  RLFC PWAGGNS+++  W       E++ + LPGR+
Sbjct:   62 EKQQDFSNWKKWFICRCERPDAKLRLFCLPWAGGNSTSYARWHEAFPDYEIVSVELPGRM 121          
BLAST of mRNA_H-elongata_contig166907.4187.1 vs. uniprot
Match: UPI0018930B93 (thioesterase II family protein n=1 Tax=Methylobacter sp. BlB1 TaxID=2785914 RepID=UPI0018930B93)

HSP 1 Score: 57.0 bits (136), Expect = 9.190e-8
Identity = 27/49 (55.10%), Postives = 30/49 (61.22%), Query Frame = 0
Query:   28 WVDLTHRVSNASARLFCCPWAGGNSSAFDAWPARLHG-VEVIPLLLPGR 75
            W    +R S A  RLFC P+AGGNSS F AWP      VEV P+ LPGR
Sbjct:   11 WFPSANRKSTAKIRLFCFPYAGGNSSLFSAWPEYFSDLVEVCPVNLPGR 59          
BLAST of mRNA_H-elongata_contig166907.4187.1 vs. uniprot
Match: UPI00200D6783 (alpha/beta fold hydrolase n=1 Tax=Sphaerisporangium sp. NEAU-ZS1 TaxID=2935860 RepID=UPI00200D6783)

HSP 1 Score: 53.1 bits (126), Expect = 1.980e-6
Identity = 23/51 (45.10%), Postives = 32/51 (62.75%), Query Frame = 0
Query:   26 KRWVDLTHRVSNASARLFCCPWAGGNSSAFDAWPARLH-GVEVIPLLLPGR 75
            +RW+    +   A  RL+C P+AGG +  FD+W   L  GVEV P++LPGR
Sbjct:    6 QRWISWRQQNPAAPVRLYCLPYAGGGTRMFDSWADALGPGVEVCPVVLPGR 56          
BLAST of mRNA_H-elongata_contig166907.4187.1 vs. uniprot
Match: A0A117NX39_9ACTN (PKS_TE domain-containing protein n=4 Tax=Streptomyces TaxID=1883 RepID=A0A117NX39_9ACTN)

HSP 1 Score: 52.8 bits (125), Expect = 2.900e-6
Identity = 25/50 (50.00%), Postives = 30/50 (60.00%), Query Frame = 0
Query:   27 RWVDLTHRVSNASARLFCCPWAGGNSSAFDAWPARLH-GVEVIPLLLPGR 75
            RW        +A+ RLFC P+AGG SS F  W   L  G+EV P+LLPGR
Sbjct:   15 RWTVARPARPDAAVRLFCFPYAGGGSSIFRNWHTHLDDGIEVCPVLLPGR 64          
BLAST of mRNA_H-elongata_contig166907.4187.1 vs. uniprot
Match: A0A349L609_9BURK (Putative thioesterase n=1 Tax=Janthinobacterium sp. TaxID=1871054 RepID=A0A349L609_9BURK)

HSP 1 Score: 51.6 bits (122), Expect = 7.600e-6
Identity = 23/39 (58.97%), Postives = 28/39 (71.79%), Query Frame = 0
Query:   37 NASARLFCCPWAGGNSSAFDAWPARLHGVEVIPLLLPGR 75
            NA  RLF  P+AGG SS +  WPARL GVE++ + LPGR
Sbjct:   15 NAPYRLFTFPFAGGGSSIYRQWPARLPGVELMAVNLPGR 53          
BLAST of mRNA_H-elongata_contig166907.4187.1 vs. uniprot
Match: A0A3S1BUA3_9CYAN (Thioesterase domain-containing protein n=1 Tax=Calothrix desertica PCC 7102 TaxID=232991 RepID=A0A3S1BUA3_9CYAN)

HSP 1 Score: 50.8 bits (120), Expect = 1.430e-5
Identity = 25/53 (47.17%), Postives = 30/53 (56.60%), Query Frame = 0
Query:   28 WVDLTHRVSNASARLFCCPWAGGNSSAFDAWPARL-----HGVEVIPLLLPGR 75
            WV    R   AS RLFC P+AGGN+ +F  W   L     + VEV P+ LPGR
Sbjct:   10 WVTFPKRNYEASLRLFCFPYAGGNAMSFRGWEKTLEKNLFNTVEVCPIELPGR 62          
BLAST of mRNA_H-elongata_contig166907.4187.1 vs. uniprot
Match: A0A127QBY3_9BURK (Alpha/beta hydrolase family protein n=1 Tax=Collimonas pratensis TaxID=279113 RepID=A0A127QBY3_9BURK)

HSP 1 Score: 50.8 bits (120), Expect = 1.490e-5
Identity = 23/48 (47.92%), Postives = 29/48 (60.42%), Query Frame = 0
Query:   28 WVDLTHRVSNASARLFCCPWAGGNSSAFDAWPARLHGVEVIPLLLPGR 75
            W     +   A  RLF  P+AGG S+ +  WPARL GVEV+ + LPGR
Sbjct:    8 WFSNFSKNIGAPYRLFTFPFAGGGSAIYRQWPARLPGVEVMAVCLPGR 55          
BLAST of mRNA_H-elongata_contig166907.4187.1 vs. uniprot
Match: A0A101P3U1_9ACTN (Thioesterase n=1 Tax=Streptomyces canus TaxID=58343 RepID=A0A101P3U1_9ACTN)

HSP 1 Score: 49.7 bits (117), Expect = 4.020e-5
Identity = 22/42 (52.38%), Postives = 28/42 (66.67%), Query Frame = 0
Query:   35 VSNASARLFCCPWAGGNSSAFDAWPARLH-GVEVIPLLLPGR 75
            V +   RL C P+AGG  S +  W ARL  GV+V+P+LLPGR
Sbjct:   24 VDSVPLRLICFPYAGGTPSVYRGWGARLGAGVQVVPVLLPGR 65          
BLAST of mRNA_H-elongata_contig166907.4187.1 vs. uniprot
Match: UPI00034AD060 (thioesterase domain-containing protein n=2 Tax=Nocardiopsis TaxID=2013 RepID=UPI00034AD060)

HSP 1 Score: 49.7 bits (117), Expect = 4.100e-5
Identity = 23/36 (63.89%), Postives = 26/36 (72.22%), Query Frame = 0
Query:   41 RLFCCPWAGGNSSAFDAWPARLH-GVEVIPLLLPGR 75
            RLFC P+AGG  S F +W A L  GVEV P+LLPGR
Sbjct:   57 RLFCLPYAGGGGSVFRSWGADLPAGVEVCPVLLPGR 92          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig166907.4187.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
A0A6H5KRN7_9PHAE2.300e-2266.67Thioesterase domain-containing protein n=2 Tax=Ect... [more]
A0A7S3UXQ5_HETAK4.200e-841.67Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
UPI0018930B939.190e-855.10thioesterase II family protein n=1 Tax=Methylobact... [more]
UPI00200D67831.980e-645.10alpha/beta fold hydrolase n=1 Tax=Sphaerisporangiu... [more]
A0A117NX39_9ACTN2.900e-650.00PKS_TE domain-containing protein n=4 Tax=Streptomy... [more]
A0A349L609_9BURK7.600e-658.97Putative thioesterase n=1 Tax=Janthinobacterium sp... [more]
A0A3S1BUA3_9CYAN1.430e-547.17Thioesterase domain-containing protein n=1 Tax=Cal... [more]
A0A127QBY3_9BURK1.490e-547.92Alpha/beta hydrolase family protein n=1 Tax=Collim... [more]
A0A101P3U1_9ACTN4.020e-552.38Thioesterase n=1 Tax=Streptomyces canus TaxID=5834... [more]
UPI00034AD0604.100e-563.89thioesterase domain-containing protein n=2 Tax=Noc... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029058Alpha/Beta hydrolase foldGENE3D3.40.50.1820coord: 2..77
e-value: 1.1E-6
score: 30.6
IPR029058Alpha/Beta hydrolase foldSUPERFAMILY53474alpha/beta-Hydrolasescoord: 26..75

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig166907contigH-elongata_contig166907:558..791 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig166907.4187.1mRNA_H-elongata_contig166907.4187.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig166907 558..791 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig166907.4187.1 ID=prot_H-elongata_contig166907.4187.1|Name=mRNA_H-elongata_contig166907.4187.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=78bp
MRTVSHRLSPLRSTQIVERQQNVSWKRWVDLTHRVSNASARLFCCPWAGG
NSSAFDAWPARLHGVEVIPLLLPGRLK*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029058AB_hydrolase