mRNA_H-elongata_contig16657.4177.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig16657.4177.1
Unique NamemRNA_H-elongata_contig16657.4177.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig16657.4177.1 vs. uniprot
Match: D7FHI5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHI5_ECTSI)

HSP 1 Score: 388 bits (997), Expect = 1.750e-132
Identity = 210/302 (69.54%), Postives = 235/302 (77.81%), Query Frame = 1
Query:    1 YSVAATAQWFLEGSRFYGARGFRNSAASFAPDDLNVDMRGRVACVTGANSGIGYSVAKSLAEHKCTVHMLCRNEARGERARSRVAEETGNEDVHLHVVDV------ENFATSFLDRNPSLNVLVNNAGGMPAERTQSPQGHEMIMATMLGGTYLLTKLLLPALENAAAAVASGSGGAEVASDT----GSKGKGGVRDAGARVINVSSGGMYTVPGGGISEDLESRRVEPWDATVVYAFAKRAQVTLTERWAASH--ASVRFNSMHPGWADTPGLAEGMPGFQRSQAGSLRSSEEGADTIVWL 870
            YSVAATAQWFLEGSR YGA+GF N+ ASF+P DL+V+MR +VACVTGANSGIGY  AKSLAE  CTVHMLCRN+ARGE AR+R++ ETGNEDV+LHVVDV      E FA SFL+ N  L+VL+NNAGGMPAERT+S QGHE IMATMLGGTYLLTKLLLPALE AA   A GS             G+  + G    GARVINVSSGGMYTV G GI+ D++S+ V+P+D TVVYA AKRAQVTLTERWAA H    V FNSMHPGW DTPGLA GMP F+  Q GSLRSSEEG+DTIVWL
Sbjct:    3 YSVAATAQWFLEGSRKYGAKGFANACASFSPGDLDVNMRSKVACVTGANSGIGYCAAKSLAERNCTVHMLCRNKARGEEARARLSAETGNEDVYLHVVDVSDFQQVETFAGSFLESNTRLDVLINNAGGMPAERTESAQGHEAIMATMLGGTYLLTKLLLPALEKAAM-TAEGSAXXXXXXXXXXXGGADSRPGGGKTGARVINVSSGGMYTVSGAGIAADVDSKGVDPYDGTVVYALAKRAQVTLTERWAAMHKDGGVSFNSMHPGWCDTPGLASGMPDFRERQQGSLRSSEEGSDTIVWL 303          
BLAST of mRNA_H-elongata_contig16657.4177.1 vs. uniprot
Match: A0A8B7ZE70_ACAPL (dehydrogenase/reductase SDR family member 12-like n=1 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7ZE70_ACAPL)

HSP 1 Score: 219 bits (557), Expect = 2.610e-66
Identity = 127/289 (43.94%), Postives = 167/289 (57.79%), Query Frame = 1
Query:   25 WFLEGSRFYGARGFRNSAASFAPDDLNVDMRGRVACVTGANSGIGYSVAKSLAEHKCTVHMLCRNEARGERARSRVAEETGNEDVHLHVVD------VENFATSFLDRNPSLNVLVNNAGGMPAERTQSPQGHEMIMATMLGGTYLLTKLLLPALENAAAAVASGSGGAEVASDTGSKGKGGVRDAGARVINVSSGGMYTVPGGGIS-EDLESRRVEPWDATVVYAFAKRAQVTLTERWAASHASVRFNSMHPGWADTPGLAEGMPGFQRSQAGSLRSSEEGADTIVWL 870
            + ++G R +   G+ ++A +F P+DL++D+  +   +TGANSGIG   A  LA+   TVHM+CR+EARG+ A+  + E +GNE VHLH+VD      V  FAT F +   +LNVLVNNAG M   R  +  G E   AT   GTY+LT  LLP L +                             G+RV+ VSSGGMYT     +S  D++  RV  +D T+VYA  KR QV +TE WA SH +V F+ MHPGWADTP +   MPGF R     LRS E+GADT+VWL
Sbjct:    9 FIIKGLREFCRSGYESAAKNFKPEDLSIDLSSQSFMITGANSGIGKCTAYELAKRGGTVHMVCRSEARGQEAQKEIKESSGNEKVHLHIVDMSQPKRVYEFATQFRESGNTLNVLVNNAGCMVNTREVTEDGLEKNFATNTLGTYILTMSLLPLLRDTP---------------------------GSRVVTVSSGGMYTQK---LSLSDMQCERVSNFDGTMVYAQNKRQQVVMTEMWAKSHPAVHFSVMHPGWADTPAVRTSMPGFHRQFKNRLRSPEQGADTLVWL 267          
BLAST of mRNA_H-elongata_contig16657.4177.1 vs. uniprot
Match: A0A7S2UXC8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXC8_9STRA)

HSP 1 Score: 216 bits (549), Expect = 2.600e-65
Identity = 126/287 (43.90%), Postives = 166/287 (57.84%), Query Frame = 1
Query:   34 EGSRFYGARGFRNSAASFAPDDLNVDMRGRVACVTGANSGIGYSVAKSLAEHKCTVHMLCRNEARGERARSRVAEETGNEDVHLHVVDVEN------FATSFLDRNPSLNVLVNNAGGMPAERTQSPQGHEMIMATMLGGTYLLTKLLLPALENAAAAVASGSGGAEVASDTGSKGKGGVRDAGARVINVSSGGMYTVPGGGISEDLESRRVEPWDATVVYAFAKRAQVTLTERWAASHA--SVRFNSMHPGWADTPGLAEGMPGFQRSQAGSLRSSEEGADTIVWL 870
            EG+  YG++GF+N    F  +   VD+ G V+C+TGANSGIG+  AK LA+ +  VH++CR+  +G+ A  ++   T N+ + LH+VDV +      FA +F   N  L+VLVNNA  MPAER ++ +G+EM + T    TYLLT  L+P L+ ++                             RVINVSS GMYTV      +DL S  + P+D  ++YA AKR QV LTE  A  +   SV  NSMHPGW DTPGLA  MP F  S  G+LRS E GADTIVWL
Sbjct:    4 EGNNLYGSKGFQNMVEKFG-EIPKVDLNGTVSCITGANSGIGFETAKKLAQFQSEVHLVCRDPVKGQEAVEKIKACTENDKIFLHIVDVSSMRQVSAFAETFAQENSKLDVLVNNAMSMPAERLETEEGNEMCIGTTAAQTYLLTTKLMPLLQKSSP---------------------------GRVINVSSAGMYTVKAR--IDDLNSENI-PYDGVLMYALAKRVQVILTEMMAEDYKGKSVTINSMHPGWVDTPGLATQMPSFYSSHKGTLRSMEAGADTIVWL 259          
BLAST of mRNA_H-elongata_contig16657.4177.1 vs. uniprot
Match: A0A2T7DX14_9POAL (Uncharacterized protein n=3 Tax=Panicum TaxID=4539 RepID=A0A2T7DX14_9POAL)

HSP 1 Score: 213 bits (543), Expect = 3.130e-64
Identity = 124/291 (42.61%), Postives = 172/291 (59.11%), Query Frame = 1
Query:   16 TAQWFLEGSRFYGARGFRNSAASFAPDDLNVDMRGRVACVTGANSGIGYSVAKSLAEHKCTVHMLCRNEARGERARSRVAEETGNEDVHLHVVD------VENFATSFLDRNPSLNVLVNNAGGMPAERTQSPQGHEMIMATMLGGTYLLTKLLLPALENAAAAVASGSGGAEVASDTGSKGKGGVRDAGARVINVSSGGMYTVPGGGISEDLESRRVEPWDATVVYAFAKRAQVTLTERWAASHASVRFNSMHPGWADTPGLAEGMPGFQRSQAGSLRSSEEGADTIVWL 870
            TA + L G   +   GF   A  F  +D+ + + G+   VTGANSGIG++ A+ LA H  TV+MLCR++ RGE A +++  +TGNE+VHL + D      V++FAT F   +  L+VLVNNAG +  +R  + +G E+  A  +  TY LT+L++P LE AA                            ARVI V+SGGMYT P   +++DL+      +D T+ YA  KR QV LTE WA  +  V F SMHPGWADTPG+A+ +PGF    +G+LRS++EGADT+VWL
Sbjct:    9 TASFGLYGFTQFTKSGFLEHAKKFREEDMQIRLDGKNCLVTGANSGIGFATAEGLASHGATVYMLCRSKERGEAALNQIRSKTGNENVHLEICDLSSINEVKSFATKFTSMDKPLHVLVNNAGLLEHKRETTAEGLELNFAVNVAATYTLTELVMPLLEKAAPD--------------------------ARVITVASGGMYTEP---LNKDLQFSEGN-FDGTLQYARNKRIQVALTEWWAEKYKGVGFYSMHPGWADTPGVAKSLPGFSEKLSGNLRSNDEGADTVVWL 269          
BLAST of mRNA_H-elongata_contig16657.4177.1 vs. uniprot
Match: A0A6J1F992_CUCMO (dehydrogenase/reductase SDR family member 12 n=7 Tax=Cucurbitaceae TaxID=3650 RepID=A0A6J1F992_CUCMO)

HSP 1 Score: 212 bits (539), Expect = 2.090e-63
Identity = 124/307 (40.39%), Postives = 182/307 (59.28%), Query Frame = 1
Query:    4 SVAATAQWFLEGSRF--YGARGFRNSAAS--------FAPDDLNVDMRGRVACVTGANSGIGYSVAKSLAEHKCTVHMLCRNEARGERARSRVAEETGNEDVHLHVVD------VENFATSFLDRNPSLNVLVNNAGGMPAERTQSPQGHEMIMATMLGGTYLLTKLLLPALENAAAAVASGSGGAEVASDTGSKGKGGVRDAGARVINVSSGGMYTVPGGGISEDLESRRVEPWDATVVYAFAKRAQVTLTERWAASHAS--VRFNSMHPGWADTPGLAEGMPGFQRSQAGSLRSSEEGADTIVWL 870
            S+ A A + L+  R   +GA G+ N   S        F P+D+  ++ G+   VTGANSGIGY+ A+ LA    TV+M+CRN+ RGE A S +  +TGN+++HL V D      V++F+++F+ +N  ++VLVNNAG +   R  + +G E+  A  + GTY +T+L++P LE AA                            A+VI VSSGGMY+VP   ++ DL+   V+ +D    YA  KR QV LTE+WA  +++  + F SMHPGWA+TPG+A+ +P F +S +G LR+ EEGADTI+WL
Sbjct:   13 SIGALAMFLLKAWRVSVFGAYGYLNFTKSAFSEHSKMFKPEDMQANIEGKNCIVTGANSGIGYATAEGLASRGATVYMVCRNKERGEAALSEIKSKTGNQNIHLEVCDLSSIRDVKSFSSNFISKNVPVHVLVNNAGLLENNRVTTSEGFELNFAVNVLGTYAITELMMPLLEKAAPD--------------------------AKVITVSSGGMYSVP---LTNDLQFSEVK-FDGAKQYALNKRVQVALTEKWAEKYSNKGIGFYSMHPGWAETPGVAKSLPSFTKSLSGKLRTREEGADTIIWL 289          
BLAST of mRNA_H-elongata_contig16657.4177.1 vs. uniprot
Match: A0A078IFY2_BRANA (BnaA09g22880D protein n=30 Tax=Brassicaceae TaxID=3700 RepID=A0A078IFY2_BRANA)

HSP 1 Score: 211 bits (536), Expect = 3.520e-63
Identity = 118/278 (42.45%), Postives = 172/278 (61.87%), Query Frame = 1
Query:   61 GFRNSAASFAPDDLNVDMRGRVACVTGANSGIGYSVAKSLAEHKCTVHMLCRNEARGERARSRVAEETGNEDVHLHVVD------VENFATSFLDRNPSLNVLVNNAGGMPAERTQSPQGHEMIMATMLGGTYLLTKLLLPALENAAAAVASGSGGAEVASDTGSKGKGGVRDAGARVINVSSGGMYTVPGGGISEDLESRRVEPWDATVVYAFAKRAQVTLTERWAASHAS--VRFNSMHPGWADTPGLAEGMPGFQRSQAGSLRSSEEGADTIVWL 870
            GF + +  F P+D+ + ++G+   VTGANSGIGY+ A+ LA    TV+M+CRN+ RGE A S++   TGN++V+L V D      +++FA+SF  ++  ++VLVNNAG +  +RT +P+G E+  A  + GTY +T+L+LP LE A+                            ++VI VSSGGMYT P   ++ DL+    E +D  + YA  KR QV LTE+WA  + +  + F SMHPGWA+TPG+A  +P F+ S +G LR+SEEGADT+VWL
Sbjct:   24 GFLDHSKKFKPEDMQIQIQGKNCVVTGANSGIGYAAAEGLASRGATVYMVCRNKERGEEALSKIQNSTGNQNVYLEVCDLSSVNDIKSFASSFASKDVPVHVLVNNAGLLENKRTTTPEGFELNFAVNVLGTYTMTELMLPLLEKASPD--------------------------SKVITVSSGGMYTSP---LTTDLQFSG-EKFDGVLQYARNKRIQVALTEKWAEKYKNKGIGFYSMHPGWAETPGVARSLPSFKESFSGKLRTSEEGADTVVWL 271          
BLAST of mRNA_H-elongata_contig16657.4177.1 vs. uniprot
Match: A0A6I9QU12_ELAGV (dehydrogenase/reductase SDR family member 12 n=2 Tax=Arecaceae TaxID=4710 RepID=A0A6I9QU12_ELAGV)

HSP 1 Score: 211 bits (536), Expect = 3.520e-63
Identity = 124/293 (42.32%), Postives = 169/293 (57.68%), Query Frame = 1
Query:   16 TAQWFLEGSRFYGARGFRNSAASFAPDDLNVDMRGRVACVTGANSGIGYSVAKSLAEHKCTVHMLCRNEARGERARSRVAEETGNEDVHLHVVD------VENFATSFLDRNPSLNVLVNNAGGMPAERTQSPQGHEMIMATMLGGTYLLTKLLLPALENAAAAVASGSGGAEVASDTGSKGKGGVRDAGARVINVSSGGMYTVPGGGISEDLESRRVEPWDATVVYAFAKRAQVTLTERWAASHAS--VRFNSMHPGWADTPGLAEGMPGFQRSQAGSLRSSEEGADTIVWL 870
            T  + L G   +   GF+  A  F  +D+ + M G+   VTGANSGIGY+ A+ LA    TV+M+CR++ RGE A S++   TGN +VHL V D      V++F + F     +L+VLVNNAG +   R  + +G E+  A  +  TY LT+L++P+LE AA                            ARVI VSSGGMYT P   ++EDL+    + +D  + YA  KR QV LTE+WA ++ S  V F SMHPGWADTPG+A+ +PGF    +G LR+SEEGADT +WL
Sbjct:    9 TTAFGLYGFTQFTKAGFQEHAKKFKEEDMQISMEGKNCMVTGANSGIGYATAEGLASRGATVYMVCRSKERGETALSKIQSTTGNPNVHLEVCDLSSISDVKSFVSRFSSEEKALHVLVNNAGLLEPNRVTTEEGLELNFAVNVAATYTLTELMMPSLEKAAPD--------------------------ARVITVSSGGMYTTP---LTEDLQFSESK-FDGVLQYARNKRVQVALTEKWAETYKSKGVSFYSMHPGWADTPGVAKSLPGFSEKLSGKLRTSEEGADTAIWL 271          
BLAST of mRNA_H-elongata_contig16657.4177.1 vs. uniprot
Match: UPI001863AEE1 (dehydrogenase/reductase SDR family member 12-like n=1 Tax=Megalops cyprinoides TaxID=118141 RepID=UPI001863AEE1)

HSP 1 Score: 211 bits (537), Expect = 4.530e-63
Identity = 122/288 (42.36%), Postives = 166/288 (57.64%), Query Frame = 1
Query:   25 WFLEGSRFYGARGFRNSAASFAPDDLNVDMRGRVACVTGANSGIGYSVAKSLAEHKCTVHMLCRNEARGERARSRVAEETGNEDVHLHVVD------VENFATSFLDRNPSLNVLVNNAGGMPAERTQSPQGHEMIMATMLGGTYLLTKLLLPALENAAAAVASGSGGAEVASDTGSKGKGGVRDAGARVINVSSGGMYTVPGGGISEDLESRRVEPWDATVVYAFAKRAQVTLTERWAASHASVRFNSMHPGWADTPGLAEGMPGFQRSQAGSLRSSEEGADTIVWL 870
            WFL+G   Y   GF  ++  F   DL+V + G+   +TGANSGIG + A ++A+   T+HM+CRN+ R E AR  +  ETGN+++H+H++D      V  FA SF  R+ SLNVL+NNAG M   R  + +G E   AT   G Y+LTK L+P LE                           R +  RV+ VSSGGM        + DL+S     +D T+VYA  KR QV +TE+WA +H+S+ F+SMHPGWADTP +A  MP F R+    LR++E+GADT VWL
Sbjct:    9 WFLKGIHEYTRSGFEAASTHFVEKDLDVSVAGKSFMITGANSGIGKATAIAIAKRGGTIHMVCRNKERAEEAREDIIRETGNKEIHVHLLDMAETQKVWEFAESFKKRHRSLNVLINNAGCMVHRREVNSEGLEKNFATNTLGVYILTKSLIPLLE---------------------------RSSNPRVVTVSSGGMLVQKLS--TSDLQSEEGY-FDGTMVYAQNKRQQVVMTEQWAKAHSSIHFSSMHPGWADTPAVATAMPQFHRTMQDKLRTAEQGADTAVWL 266          
BLAST of mRNA_H-elongata_contig16657.4177.1 vs. uniprot
Match: I1GXQ3_BRADI (Uncharacterized protein n=2 Tax=Brachypodium distachyon TaxID=15368 RepID=I1GXQ3_BRADI)

HSP 1 Score: 209 bits (533), Expect = 1.110e-62
Identity = 122/293 (41.64%), Postives = 171/293 (58.36%), Query Frame = 1
Query:   16 TAQWFLEGSRFYGARGFRNSAASFAPDDLNVDMRGRVACVTGANSGIGYSVAKSLAEHKCTVHMLCRNEARGERARSRVAEETGNEDVHLHVVD------VENFATSFLDRNPSLNVLVNNAGGMPAERTQSPQGHEMIMATMLGGTYLLTKLLLPALENAAAAVASGSGGAEVASDTGSKGKGGVRDAGARVINVSSGGMYTVPGGGISEDLESRRVEPWDATVVYAFAKRAQVTLTERWAASHAS--VRFNSMHPGWADTPGLAEGMPGFQRSQAGSLRSSEEGADTIVWL 870
            TA + L G   +   GF   A  F  +D+ + + G+   VTGANSG+G++ A+ LA H  TV+MLCRN+ RGE A  ++  +TGN +VHL + D      +++F T F   N  L+VLVNNAG +  +R  +P+G E+  A  +  TY LT+L++P LE AA                            ARVI VSSGGMYT P   ++ +LE R  + +D T  YA  KR QV LTE W+  +++  + F SMHPGWADTPG+++ +PG     +G+LRS+EEGADT+VWL
Sbjct:    9 TAAFGLYGFTQFTKSGFAEHAKKFREEDMQIRLDGKNCLVTGANSGLGFATAEGLASHGATVYMLCRNKERGETALKQIRSKTGNMNVHLEICDLSSINEIKSFTTRFSSMNKPLHVLVNNAGFLEHKRVTTPEGLELNFAVNVAATYTLTELVMPLLEKAAPD--------------------------ARVITVSSGGMYTEP---LNNNLEYRESD-FDGTKQYARNKRVQVALTEWWSEKYSNKGIGFYSMHPGWADTPGVSKSLPGLSEKLSGNLRSNEEGADTVVWL 271          
BLAST of mRNA_H-elongata_contig16657.4177.1 vs. uniprot
Match: A0A1S4E3H2_CUCME (dehydrogenase/reductase SDR family member 12 isoform X1 n=4 Tax=Cucumis TaxID=3655 RepID=A0A1S4E3H2_CUCME)

HSP 1 Score: 209 bits (533), Expect = 1.660e-62
Identity = 120/295 (40.68%), Postives = 173/295 (58.64%), Query Frame = 1
Query:   25 WFLEGSRFYGARGFRNSA-----ASFAPDDLNVDMRGRVACVTGANSGIGYSVAKSLAEHKCTVHMLCRNEARGERARSRVAEETGNEDVHLHVVD------VENFATSFLDRNPSLNVLVNNAGGMPAERTQSPQGHEMIMATMLGGTYLLTKLLLPALENAAAAVASGSGGAEVASDTGSKGKGGVRDAGARVINVSSGGMYTVPGGGISEDLESRRVEPWDATVVYAFAKRAQVTLTERWAASHAS--VRFNSMHPGWADTPGLAEGMPGFQRSQAGSLRSSEEGADTIVWL 870
            W L     YG   F  SA       F P+D+  ++ G+   VTGANSGIGY+ A+ LA    TV+M+CR++ RGE A S +  +TGN++VHL V D      +++F+++F+ +N  ++VLVNNAG +   R  + +G E+  A  + GTY +T+ LLP LE AA                            A+VI VSSGGMY+VP   +++DL+    + +D  + YA  KR QV LTE+WA  ++   + F SMHPGWA+TPG+ + +P F +S +G LR+SEEGADTI+WL
Sbjct:   25 WRLSAFGVYGYLNFTKSAFIEHSKMFKPEDMQTNIEGKNCIVTGANSGIGYATAEGLASRGATVYMICRSKERGEAALSEIKSKTGNQNVHLEVCDLSSIRDIKSFSSNFISKNVPVHVLVNNAGLLEKNRITTSEGFELNFAVNVLGTYAMTESLLPLLEKAAPD--------------------------AKVITVSSGGMYSVP---LTDDLQFSE-DQFDGAIQYALNKRVQVALTEKWAEMYSKKGIGFYSMHPGWAETPGVTKSLPSFSKSLSGKLRTSEEGADTIIWL 289          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig16657.4177.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FHI5_ECTSI1.750e-13269.54Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A8B7ZE70_ACAPL2.610e-6643.94dehydrogenase/reductase SDR family member 12-like ... [more]
A0A7S2UXC8_9STRA2.600e-6543.90Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A2T7DX14_9POAL3.130e-6442.61Uncharacterized protein n=3 Tax=Panicum TaxID=4539... [more]
A0A6J1F992_CUCMO2.090e-6340.39dehydrogenase/reductase SDR family member 12 n=7 T... [more]
A0A078IFY2_BRANA3.520e-6342.45BnaA09g22880D protein n=30 Tax=Brassicaceae TaxID=... [more]
A0A6I9QU12_ELAGV3.520e-6342.32dehydrogenase/reductase SDR family member 12 n=2 T... [more]
UPI001863AEE14.530e-6342.36dehydrogenase/reductase SDR family member 12-like ... [more]
I1GXQ3_BRADI1.110e-6241.64Uncharacterized protein n=2 Tax=Brachypodium dista... [more]
A0A1S4E3H2_CUCME1.660e-6240.68dehydrogenase/reductase SDR family member 12 isofo... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig16657contigH-elongata_contig16657:1656..7235 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score392.1
Seed ortholog evalue2.2e-106
Seed eggNOG ortholog2880.D7FHI5
Preferred nameDHRS12
KEGG koko:K11168
EggNOG free text desc.oxidation-reduction process
EggNOG OGsCOG1028@1,KOG1208@2759
Ec32 ortholog descriptionNAD(P)-binding domain
Ec32 orthologEc-25_002240.1
COG Functional cat.IQ
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000
Hectar predicted targeting categoryother localisation
Exons5
Model size870
Cds size870
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig16657.4177.1prot_H-elongata_contig16657.4177.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig16657 1656..7235 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929974.6143322-CDS-H-elongata_contig16657:1655..17631622929974.6143322-CDS-H-elongata_contig16657:1655..1763Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16657 1656..1763 +
1691679230.7331414-CDS-H-elongata_contig16657:1655..17631691679230.7331414-CDS-H-elongata_contig16657:1655..1763Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16657 1656..1763 +
1622929974.628262-CDS-H-elongata_contig16657:2402..25911622929974.628262-CDS-H-elongata_contig16657:2402..2591Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16657 2403..2591 +
1691679230.7477405-CDS-H-elongata_contig16657:2402..25911691679230.7477405-CDS-H-elongata_contig16657:2402..2591Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16657 2403..2591 +
1622929974.6431434-CDS-H-elongata_contig16657:3815..39351622929974.6431434-CDS-H-elongata_contig16657:3815..3935Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16657 3816..3935 +
1691679230.7591403-CDS-H-elongata_contig16657:3815..39351691679230.7591403-CDS-H-elongata_contig16657:3815..3935Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16657 3816..3935 +
1622929974.657402-CDS-H-elongata_contig16657:6305..65621622929974.657402-CDS-H-elongata_contig16657:6305..6562Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16657 6306..6562 +
1691679230.7701395-CDS-H-elongata_contig16657:6305..65621691679230.7701395-CDS-H-elongata_contig16657:6305..6562Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16657 6306..6562 +
1622929974.6733503-CDS-H-elongata_contig16657:7039..72351622929974.6733503-CDS-H-elongata_contig16657:7039..7235Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16657 7040..7235 +
1691679230.7795007-CDS-H-elongata_contig16657:7039..72351691679230.7795007-CDS-H-elongata_contig16657:7039..7235Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16657 7040..7235 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig16657.4177.1

>prot_H-elongata_contig16657.4177.1 ID=prot_H-elongata_contig16657.4177.1|Name=mRNA_H-elongata_contig16657.4177.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=290bp
YSVAATAQWFLEGSRFYGARGFRNSAASFAPDDLNVDMRGRVACVTGANS
GIGYSVAKSLAEHKCTVHMLCRNEARGERARSRVAEETGNEDVHLHVVDV
ENFATSFLDRNPSLNVLVNNAGGMPAERTQSPQGHEMIMATMLGGTYLLT
KLLLPALENAAAAVASGSGGAEVASDTGSKGKGGVRDAGARVINVSSGGM
YTVPGGGISEDLESRRVEPWDATVVYAFAKRAQVTLTERWAASHASVRFN
SMHPGWADTPGLAEGMPGFQRSQAGSLRSSEEGADTIVWL
back to top

mRNA from alignment at H-elongata_contig16657:1656..7235+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig16657.4177.1 ID=mRNA_H-elongata_contig16657.4177.1|Name=mRNA_H-elongata_contig16657.4177.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=5580bp|location=Sequence derived from alignment at H-elongata_contig16657:1656..7235+ (Himanthalia elongata Himel1 dioecious)
TACTCCGTCGCCGCAACCGCTCAGTGGTTCTTAGAGGGGTCCCGCTTTTA CGGTGCCCGCGGCTTCAGGAATTCCGCCGCCTCCTTCGCTCCTGACGACC TCAACGTGGTGAGCGATAAAAGCAAGAAAACGAGGACGTGTTTGTCGTGG AAGGCATGCCGATTAGTATTAACAAATCAACAACGGGGGGGAGGGGGGGG TGCTCAAGCATTGCATCCCTTAGATGTTAGACCATTGACCACGCGCCCTG GGGAGGACAAGAACGTCAGGGTAGAGTTGTACACCTTGGAAAGGGGATTG CCCCTGCGGTGATTCGAACACTTTGGCGCGTGGGGCTCCCAGTGGACACC TCGTCTCCGGGCTCTGCCTTTAAAAAGAGTCTTCGCTTTGTTGCCCCATT GCTGCTCGTTGTGTCACGCGGCGGTTTCTAACCGGACGATGATCGATCAC AAACCGCTCCAACCTCCTTCCGACCGACTGCTCGGAAGGGATGCCGTTCA TGTCTGACTCTTAATATTAATAACCTCCCCTGTGCGTACATGTTTGCTTG GGCGACAATGAACTCCCCCGTTCGAGCTCAGGGCAAAAGCCCCGTCATGG TTGGCTACCCGATGGGTGTGCCAACATTAACCTAAGGATATACAGTATGT AATAATGATTTGTTTTAATGCGTAAGGCCGTATCCTGCGGCAGATAGTGA TGTGGACGCAACCGCCGCCGCCCTCCCCTCGATTCCGGCGCGCGCAGGAC ATGCGAGGCCGGGTGGCCTGCGTGACCGGGGCAAACTCTGGAATCGGCTA CAGCGTGGCTAAGTCTCTCGCGGAGCACAAGTGCACGGTGCACATGCTTT GCAGGAACGAGGCCAGGGGCGAGCGGGCGAGGAGCCGCGTTGCGGAAGAA ACGGGGAACGAAGACGTACATCTCCACGTGGTGGACGTTTCCGACTTCCA GCAGGCGAGGGCCGCGACGATTCTTGACGAGGCTGGGACGATTATGTGGA TGTGGATTAGGGATTAGGGGTTAGGGGCATTGGAACGAAGACGGAATGTG GTCGGTCGGGGTGCTATGGGGAAGGAAGGGAGGCTAAACATTGTTTGTTT GGTCAAGTTCGTTCCGAGTCAGGGTAGGAACAGGAATGATGACGGCGTGT ATTTCGTGGAGATGTTCTCGGCATCAGGAAGCCAAGGCAAAAGGAGGGGG GGGGAGGGTGATGTCCACGCCCCCCCCCCTCCGCCCCTCCGCCTCTCTAT CCCTGCTTCCCCCTGTTCGCTGTATGATGTACACACCACCCATGTACCGC CTTCATGTCTGTGAGAATTTACTCTTGCTGTACCCTTAGCCTACCATCCA GCCACCGTCAGGACTGATGCCCTGCCGTAGGTGCAGTGACTGCCCTCGTC GTCCTTCCTCCCGAGGGGTTGTGACACCATCGAATCGCCACATCGCGGTC ATGATATCCTTCTCTTTCTCATTCTCCTCACCACCGCCATCACGCGGCAT GATCTCCGTAGAACGAGTAATCCAACGATGGAGGGGGGGGTATTGCTTAA ACACCCCCGGTTCATGGAAGGGACTTGCTAAATTATTCCCCTTCTCGGGG ACAAAATGTATACATCCCCTACTTAGTGGGATTCATATATCACACATGAA GTGCTACGACCGGGGATACGACGATTGGATCTCCGGAAGGGGGAAATTTT TAACTTCCTCTCCGAAAATCGGGGGCAATTATTTTACGTCCCCTCCCCCC CATGTTTGGGTTGGTTGTGCGGCGACCAAAAATAAAAACCCCACGCGCCC CCCCGGCCCCCCCCCCATCTTTGGATTGGTCGAGCGTCGACTAAAAATGA AACCCGCTCGCACCCCCTCCCCCCCCCCGACCCGACTCAATGAGTTCCGA TGATGCGTTGCCGTTGCTTAGAGAATGCTGTCCCGATCCCGATCTTAAGA CCCCTTCCGAGAGAGAGAGAATTGAGACGAATTGCCGCTATCAATAGCCA TTCAGGTCTCCCAAACGTGTACGTGGATATATGTGTGTACAACAGCGGTA TCTCAACACGCGGCGCTACCTCTGGTTGCTGCTCGATTGTCCCCGCCATC CAAACCTCTCCTCCGGCCCCCAATCGATGTTTTTCTTTCGCTCCTTGTCC ACGCGAAAAGGTGGAGAATTTCGCAACGTCGTTCCTTGACCGCAACCCTT CTCTCAACGTCCTGGTAAACAACGCGGGAGGTATGCCGGCGGAGAGGACG CAAAGTCCTCAGGGCCACGAGATGATCATGGTGCGTGTGACTTAGGGAAA TTATTTGGGGGTGGGGGGTGGGGAGAGATAGACAACACAGCCTTTTGAGG AGATTGTAAGGATTGTCTTGTAGACAGGAGCCCAGCAGCACATAGATGCT TGGCTGCTCAATCTAGGTCGTTGGGAGGCCTTAGTTACTTTTTGCACGCG TTGTGGCCGTATGCCCTTTTCCCGTCAAGGATACCAGTATATGAATTTGG TGTGATAGCTGCGGTGGTGGTCAAAAGCGGGAGTTGTAGTACTTACAAAA AAGGTGTTTTTGAATGAGGGAATCCGGGGATCACGGAGACACCGATGCAG AGGTGAACCGCCTCCGATGATGTCTGTGATTGTATCGTGGGTGTGGGAAA AGAGACGCGCACAATAATTGGTCCATGGGGTTACCTGAATAGGCTGCACC CGTTACTCAAGCTACCTTGAGGGCTGCTGAATGAATGTCGGCAGACTCTC GTTGGTGAACGCCATCGTACGCAATTGCGTGACTTGATGAACTCGGGATT GGGTTGACGGTAGAAATGGACGCCTTCTCGGAAAACGAGAGGATCGAGAG GATCTCGGGAGTACGCACCAGATTCAACCTGGTTTGGGAGAATGACCGGG CTAACGCGGGACGGGACGGCTGAACCCGTCTCGCGAGACCAAATTATCAG GCGCGAACAAGGGCAGGGAAATATAATTTTCCCCTGTTTAGCTGACCACA AGCAGAAGGCAACCAAATCCGGTTGATCCATACTCTGCTTTATTTAATGA CGTCATGACCACACACAACCTCTCTACACGTCAGCACCGTAAAGCCGGAG CTCACACCACGCTGGCGTGCTAGCGAGGCAACTATAATTTGATCTAAGAG AAACGAGATGAACAGTTGATTGATTGATCGAATTCTCACATAAGCTGATG TCAAAATCCAGCCCGTGGTCACAAGGTGAGAAAAATCACCACCATCCGGA AGGAAAAAAACGTTCAATGTACTCTCCAATACAAAAGGAAACGGCAAATG GTGCATAACACTAGTACTCGGAAAAAGCGACGTCTCCAAAGAAAAAATAA GAAAGAATCCCAAAAAAGAGAACACACACAGTTGTTTACGAACTGCGTGT GACTGTCGGGACGCGGGCCTATCCGAGAACGGTTGAACGAAGAGCCAAGG GTGTAGTGAAAGCAACAACAAAAACAAGACGAAAACGAAAGAAAAACAAG ACAAAGACCCCCACCCCCCCTTGTAACGCCAGAGAAAGGCAATATGATAT CAAAACCCCAAAAACGCACGGCGGATAATGTATTTGCGCCACTCGTGACT AATCAACTATGGCGAGCAAACCAGCACGAGCACGCTTGCTTTGGGTTATA TCCTCTCCTTGGTCCTCCCCGTCACGTTCGGACATGCTCCTCCATGCCGT AGTCCATCTTCGGTGCTGAAATATCGCGATAGGCTCTCCAGTCGGTGACC TGGCCTGGACATCCCTTGCGCCAAGCCGATCGTTTACCGTTTTGGTAACT CCCGGGAAGGCGTGTTTGAAGCGGGCAGTATCGACAACCCTAAATCGTAC TGGTCGTGGAGAGCGCATCGCGATCGCATGGACAATAATTTCGGATCTGG TCAACACGCACAGTAGCTTTTCTGTGATCAATAGCGTGCTGCTGTTGGCC TCGTATTACTCGATAGAGACTGTGCGTGTTTTTACCTGTTGATTATCATA GTCGTCACGACAACTTTAGACGCTACTCGGCTATATAGTGTGGTGTTGCC AGATGCGTGTGTCTGCCGCATTTTTCTTGTATGGTCAGCGTTGCGGCGGT ACTGATACTGAGAGGCACGGCGCGTTCTGAGGCTTGTGTTGTACGGCGTG CCCGAGGCTAAATCTCAGCCATCACGCGAATCGTGTGCCCCCTTGAAACC GTTGCCGATCTGGTCAATCCGATAGCAAACAAAAACCAAAGTCGTTTGAG ATGCTGCCAAAGTAAATGTATATATCTCTATATAGTATATAGTATAAATC ATATAGTATAGAGCATATACTATATACTATATACTAGGTAGCATATAGTA TATACTATAGAGTATATAGTATATTGCTACAACCCACATTTTTTTACGAC CGCCATCGGCAGGGTGATGTGAGTGCTCGATGCTGAGTTTGGCAGACTCG ATGCTGGGTCGGTCGAGCGCCCCGAACGATGAGAGAGACTTCTCATCACA AGCTCGAAAATCAAGGTTTTGATAGAAAAGGCAAAATCCGGTCTTCTCGT CCAGAAAAGGAATCAGCTGCACCGCCATTTTATTGATTTATTGAATTTTT TATTTATTTATTATCTCGTTTTCCCCAACCTAAAATCTTCCCTCAAGCAG GCGACGATGCTAGGAGGGACGTACCTCCTCACCAAGCTTCTCCTTCCGGC CCTGGAAAACGCGGCGGCGGCGGTTGCGTCTGGTTCCGGCGGCGCGGAAG TCGCCAGTGATACAGGATCGAAGGGGAAAGGAGGCGTGCGTGATGCGGGG GCGCGGGTAATCAATGTGTCCTCGGGTGGCATGTACACAGTCCCGGGCGG TGGGATTTCCGAAGACTTGGAGAGCCGGAGGGTTGAGCCTTGGGATGCGA CGGTCGTGTGAGGAACGAAATACCCATGGTTGATTTGTGACAAACGTTTC AGGAAGACTTGATGGAGACTCAACTCACCTGTAAACTATAATATTTGATA ATAGGAGAAACCAACCATGTTTGATGCTCAAAAACGACAGCATGTAGATG GAGTCATAACTTGCCCAATTTTTTCGGGGGGTTTCTTCGCTCCAGCCATA TTCTGCCGATGCTTGTTTAGGGAGACGGGGAGGGGGTAAACTGAAGGTAT GATGTAGAAAAAAATCAAGGCTCGAAAAAAACGTACGGGTGTTTTCTTAC GTCGGGGGTGCGAAGAGGGGTTTGGAGCTCCCCCGCCTCTCTCTCTCTCT CTCTCTCTCTCTCTTGCGATTTTCGTGTCCTCAAGCCAGTCTGCGCCAGA TGCTGCTGTAGCGTGCCATCACTCTAACCCCCCACCACCCTCCATATTGT GCACGCCTCCCTCCAAAACCGTCGGCATCAAAAGCTACGCTTTTGCCAAG CGCGCGCAGGTGACGCTCACCGAACGGTGGGCAGCGTCGCACGCGAGCGT GCGCTTCAACTCCATGCACCCCGGATGGGCCGACACCCCTGGGCTCGCCG AGGGGATGCCGGGTTTCCAGAGGTCGCAGGCGGGATCTCTGCGGTCCTCC GAAGAAGGGGCCGACACCATCGTCTGGCTG
back to top

Coding sequence (CDS) from alignment at H-elongata_contig16657:1656..7235+

>mRNA_H-elongata_contig16657.4177.1 ID=mRNA_H-elongata_contig16657.4177.1|Name=mRNA_H-elongata_contig16657.4177.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1740bp|location=Sequence derived from alignment at H-elongata_contig16657:1656..7235+ (Himanthalia elongata Himel1 dioecious)
TACTCCGTCGCCGCAACCGCTCAGTGGTTCTTAGAGGGGTCCCGCTTTTA
CGGTGCCCGCGGCTTCAGGAATTCCGCCGCCTCCTTCGCTCCTGACGACC
TCAACGTGTACTCCGTCGCCGCAACCGCTCAGTGGTTCTTAGAGGGGTCC
CGCTTTTACGGTGCCCGCGGCTTCAGGAATTCCGCCGCCTCCTTCGCTCC
TGACGACCTCAACGTGGACATGCGAGGCCGGGTGGCCTGCGTGACCGGGG
CAAACTCTGGAATCGGCTACAGCGTGGCTAAGTCTCTCGCGGAGCACAAG
TGCACGGTGCACATGCTTTGCAGGAACGAGGCCAGGGGCGAGCGGGCGAG
GAGCCGCGTTGCGGAAGAAACGGGGAACGAAGACGTACATCTCCACGTGG
TGGACGACATGCGAGGCCGGGTGGCCTGCGTGACCGGGGCAAACTCTGGA
ATCGGCTACAGCGTGGCTAAGTCTCTCGCGGAGCACAAGTGCACGGTGCA
CATGCTTTGCAGGAACGAGGCCAGGGGCGAGCGGGCGAGGAGCCGCGTTG
CGGAAGAAACGGGGAACGAAGACGTACATCTCCACGTGGTGGACGTGGAG
AATTTCGCAACGTCGTTCCTTGACCGCAACCCTTCTCTCAACGTCCTGGT
AAACAACGCGGGAGGTATGCCGGCGGAGAGGACGCAAAGTCCTCAGGGCC
ACGAGATGATCATGGTGGAGAATTTCGCAACGTCGTTCCTTGACCGCAAC
CCTTCTCTCAACGTCCTGGTAAACAACGCGGGAGGTATGCCGGCGGAGAG
GACGCAAAGTCCTCAGGGCCACGAGATGATCATGGCGACGATGCTAGGAG
GGACGTACCTCCTCACCAAGCTTCTCCTTCCGGCCCTGGAAAACGCGGCG
GCGGCGGTTGCGTCTGGTTCCGGCGGCGCGGAAGTCGCCAGTGATACAGG
ATCGAAGGGGAAAGGAGGCGTGCGTGATGCGGGGGCGCGGGTAATCAATG
TGTCCTCGGGTGGCATGTACACAGTCCCGGGCGGTGGGATTTCCGAAGAC
TTGGAGAGCCGGAGGGTTGAGCCTTGGGATGCGACGGTCGTGCGACGATG
CTAGGAGGGACGTACCTCCTCACCAAGCTTCTCCTTCCGGCCCTGGAAAA
CGCGGCGGCGGCGGTTGCGTCTGGTTCCGGCGGCGCGGAAGTCGCCAGTG
ATACAGGATCGAAGGGGAAAGGAGGCGTGCGTGATGCGGGGGCGCGGGTA
ATCAATGTGTCCTCGGGTGGCATGTACACAGTCCCGGGCGGTGGGATTTC
CGAAGACTTGGAGAGCCGGAGGGTTGAGCCTTGGGATGCGACGGTCGTCT
ACGCTTTTGCCAAGCGCGCGCAGGTGACGCTCACCGAACGGTGGGCAGCG
TCGCACGCGAGCGTGCGCTTCAACTCCATGCACCCCGGATGGGCCGACAC
CCCTGGGCTCGCCGAGGGGATGCCGGGTTTCCAGAGGTCGCAGGCGGGAT
CTCTGCGGTCCTCCGAAGAAGGGGCCGACACCATCGTCTGGCTGCTACGC
TTTTGCCAAGCGCGCGCAGGTGACGCTCACCGAACGGTGGGCAGCGTCGC
ACGCGAGCGTGCGCTTCAACTCCATGCACCCCGGATGGGCCGACACCCCT
GGGCTCGCCGAGGGGATGCCGGGTTTCCAGAGGTCGCAGGCGGGATCTCT
GCGGTCCTCCGAAGAAGGGGCCGACACCATCGTCTGGCTG
back to top