prot_H-elongata_contig16656.4176.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig16656.4176.1
Unique Name	prot_H-elongata_contig16656.4176.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	88

Homology

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BLAST of mRNA_H-elongata_contig16656.4176.1 vs. uniprot
Match: A0A6H5KSF1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSF1_9PHAE)

HSP 1 Score: 112 bits (281), Expect = 2.070e-30
Identity = 57/84 (67.86%), Postives = 66/84 (78.57%), Query Frame = 0

Query:    5 REQLPLTLCWAITLHKSQGQTSDKAVVDLGKSEATAGLTFICLSRAKRLVDLVVEPMCFDILFKLGEVISLRPRLEEEVRLKTL 88
            R QLPL LCWAIT+HKSQGQT  KAV+DLG  EA  GLTF+CLSRAKRLVDL+VEPM FD +  LG   +++ RL+EEVRL  L
Sbjct:   15 RTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLMVEPMSFDRIGNLGNSPTMKARLQEEVRLGEL 98

[Close]

BLAST of mRNA_H-elongata_contig16656.4176.1 vs. uniprot
Match: A0A6H5KCP5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCP5_9PHAE)

HSP 1 Score: 112 bits (281), Expect = 1.180e-29
Identity = 57/84 (67.86%), Postives = 66/84 (78.57%), Query Frame = 0

Query:    5 REQLPLTLCWAITLHKSQGQTSDKAVVDLGKSEATAGLTFICLSRAKRLVDLVVEPMCFDILFKLGEVISLRPRLEEEVRLKTL 88
            R QLPL LCWAIT+HKSQGQT  KAV+DLG  EA  GLTF+CLSRAKRLVDL+VEPM FD +  LG   +++ RL+EEVRL  L
Sbjct:   13 RTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLMVEPMSFDRIGNLGNSPTMKARLQEEVRLGEL 96

[Close]

BLAST of mRNA_H-elongata_contig16656.4176.1 vs. uniprot
Match: A0A6H5K214_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K214_9PHAE)

HSP 1 Score: 113 bits (283), Expect = 1.190e-29
Identity = 57/84 (67.86%), Postives = 66/84 (78.57%), Query Frame = 0

Query:    5 REQLPLTLCWAITLHKSQGQTSDKAVVDLGKSEATAGLTFICLSRAKRLVDLVVEPMCFDILFKLGEVISLRPRLEEEVRLKTL 88
            R QLPL LCWAIT+HKSQGQT  KAV+DLG  EA  GLTF+CLSRAKRLVDL+VEPM FD +  LG   +++ RL+EEVRL  L
Sbjct:   10 RTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLIVEPMSFDRIGNLGNSSTMKGRLQEEVRLGEL 93

[Close]

BLAST of mRNA_H-elongata_contig16656.4176.1 vs. uniprot
Match: A0A6H5JMH2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMH2_9PHAE)

HSP 1 Score: 112 bits (281), Expect = 1.210e-29
Identity = 57/84 (67.86%), Postives = 66/84 (78.57%), Query Frame = 0

Query:    5 REQLPLTLCWAITLHKSQGQTSDKAVVDLGKSEATAGLTFICLSRAKRLVDLVVEPMCFDILFKLGEVISLRPRLEEEVRLKTL 88
            R QLPL LCWAIT+HKSQGQT  KAV+DLG  EA  GLTF+CLSRAKRLVDL+VEPM FD +  LG   +++ RL+EEVRL  L
Sbjct:   79 RTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLMVEPMSFDRIGNLGNSPTMKARLQEEVRLGEL 162

[Close]

BLAST of mRNA_H-elongata_contig16656.4176.1 vs. uniprot
Match: A0A6H5JUS2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUS2_9PHAE)

HSP 1 Score: 112 bits (281), Expect = 1.520e-28
Identity = 57/84 (67.86%), Postives = 66/84 (78.57%), Query Frame = 0

Query:    5 REQLPLTLCWAITLHKSQGQTSDKAVVDLGKSEATAGLTFICLSRAKRLVDLVVEPMCFDILFKLGEVISLRPRLEEEVRLKTL 88
            R QLPL LCWAIT+HKSQGQT  KAV+DLG  EA  GLTF+CLSRAKRLVDL+VEPM FD +  LG   +++ RL+EEVRL  L
Sbjct:  186 RTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLMVEPMSFDRIGNLGNSPTMKARLQEEVRLGEL 269

[Close]

BLAST of mRNA_H-elongata_contig16656.4176.1 vs. uniprot
Match: A0A6H5KN08_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN08_9PHAE)

HSP 1 Score: 112 bits (281), Expect = 1.840e-28
Identity = 57/84 (67.86%), Postives = 66/84 (78.57%), Query Frame = 0

Query:    5 REQLPLTLCWAITLHKSQGQTSDKAVVDLGKSEATAGLTFICLSRAKRLVDLVVEPMCFDILFKLGEVISLRPRLEEEVRLKTL 88
            R QLPL LCWAIT+HKSQGQT  KAV+DLG  EA  GLTF+CLSRAKRLVDL+VEPM FD +  LG   +++ RL+EEVRL  L
Sbjct:   13 RTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLMVEPMSFDRIGNLGNSPTMKARLQEEVRLGEL 96

[Close]

BLAST of mRNA_H-elongata_contig16656.4176.1 vs. uniprot
Match: A0A6H5KFN2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFN2_9PHAE)

HSP 1 Score: 107 bits (268), Expect = 4.980e-28
Identity = 53/78 (67.95%), Postives = 62/78 (79.49%), Query Frame = 0

Query:    5 REQLPLTLCWAITLHKSQGQTSDKAVVDLGKSEATAGLTFICLSRAKRLVDLVVEPMCFDILFKLGEVISLRPRLEEE 82
            R QLPL LCWAIT+HKSQGQT  KAV+DLG  EA  GLTF+CLSRAKRLVDL+VEPM FD +  LG   +++ RL+EE
Sbjct:   13 RTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLMVEPMSFDRIGNLGNSPTMKARLQEE 90

[Close]

BLAST of mRNA_H-elongata_contig16656.4176.1 vs. uniprot
Match: A0A6H5JFG8_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFG8_9PHAE)

HSP 1 Score: 112 bits (281), Expect = 1.760e-27
Identity = 57/84 (67.86%), Postives = 66/84 (78.57%), Query Frame = 0

Query:    5 REQLPLTLCWAITLHKSQGQTSDKAVVDLGKSEATAGLTFICLSRAKRLVDLVVEPMCFDILFKLGEVISLRPRLEEEVRLKTL 88
            R QLPL LCWAIT+HKSQGQT  KAV+DLG  EA  GLTF+CLSRAKRLVDL+VEPM FD +  LG   +++ RL+EEVRL  L
Sbjct:  360 RTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLMVEPMSFDRIGNLGNSPTMKARLQEEVRLGEL 443

[Close]

BLAST of mRNA_H-elongata_contig16656.4176.1 vs. uniprot
Match: A0A6H5K4U7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4U7_9PHAE)

HSP 1 Score: 112 bits (281), Expect = 2.050e-27
Identity = 57/84 (67.86%), Postives = 66/84 (78.57%), Query Frame = 0

Query:    5 REQLPLTLCWAITLHKSQGQTSDKAVVDLGKSEATAGLTFICLSRAKRLVDLVVEPMCFDILFKLGEVISLRPRLEEEVRLKTL 88
            R QLPL LCWAIT+HKSQGQT  KAV+DLG  EA  GLTF+CLSRAKRLVDL+VEPM FD +  LG   +++ RL+EEVRL  L
Sbjct:   77 RTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLMVEPMSFDRIGNLGNSPTMKARLQEEVRLGEL 160

[Close]

BLAST of mRNA_H-elongata_contig16656.4176.1 vs. uniprot
Match: A0A6H5J8Y8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8Y8_9PHAE)

HSP 1 Score: 112 bits (281), Expect = 3.510e-27
Identity = 57/84 (67.86%), Postives = 66/84 (78.57%), Query Frame = 0

Query:    5 REQLPLTLCWAITLHKSQGQTSDKAVVDLGKSEATAGLTFICLSRAKRLVDLVVEPMCFDILFKLGEVISLRPRLEEEVRLKTL 88
            R QLPL LCWAIT+HKSQGQT  KAV+DLG  EA  GLTF+CLSRAKRLVDL+VEPM FD +  LG   +++ RL+EEVRL  L
Sbjct:  356 RTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLMVEPMSFDRIGNLGNSPTMKARLQEEVRLGEL 439

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig16656.4176.1 vs. uniprot

BLAST of mRNA_H-elongata_contig16656.4176.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KSF1_9PHAE	2.070e-30	67.86	Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KCP5_9PHAE	1.180e-29	67.86	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5K214_9PHAE	1.190e-29	67.86	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JMH2_9PHAE	1.210e-29	67.86	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JUS2_9PHAE	1.520e-28	67.86	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KN08_9PHAE	1.840e-28	67.86	Uncharacterized protein (Fragment) n=1 Tax=Ectocar...	[more]
A0A6H5KFN2_9PHAE	4.980e-28	67.95	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JFG8_9PHAE	1.760e-27	67.86	Reverse transcriptase domain-containing protein n=...	[more]
A0A6H5K4U7_9PHAE	2.050e-27	67.86	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5J8Y8_9PHAE	3.510e-27	67.86	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.50.300		coord: 1..68 e-value: 2.1E-6 score: 29.6
None	No IPR available	PANTHER	PTHR23274:SF32	ATP-DEPENDENT DNA HELICASE PIF1	coord: 3..77
None	No IPR available	PANTHER	PTHR23274	DNA HELICASE-RELATED	coord: 3..77
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..7
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 8..18
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 24..88
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..23
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 19..23
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 4..60

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig16656	contig	H-elongata_contig16656:511..774 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig16656.4176.1	mRNA_H-elongata_contig16656.4176.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig16656 511..774 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig16656.4176.1 ID=prot_H-elongata_contig16656.4176.1|Name=mRNA_H-elongata_contig16656.4176.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=88bp
KQASREQLPLTLCWAITLHKSQGQTSDKAVVDLGKSEATAGLTFICLSRA
KRLVDLVVEPMCFDILFKLGEVISLRPRLEEEVRLKTL

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR027417	P-loop_NTPase