prot_H-elongata_contig166504.4174.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig166504.4174.1
Unique Nameprot_H-elongata_contig166504.4174.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length83
Homology
BLAST of mRNA_H-elongata_contig166504.4174.1 vs. uniprot
Match: A0A6H5KNF2_9PHAE (DDE Tnp4 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNF2_9PHAE)

HSP 1 Score: 119 bits (297), Expect = 2.880e-31
Identity = 54/82 (65.85%), Postives = 66/82 (80.49%), Query Frame = 0
Query:    1 ILGDAAYPPSDRGLVPYPGTELPNSQNAYNYYQSQCRMAIEQKFGILVKTWGILWPPMEVHQPRFTQVVNSVIRLHNFCRNR 82
            ++GDAAY  S+R +VP+PGT L  SQ+A NYY SQCRMAIEQ +GILV+ WGILW PMEV   +F  VVN+V+RLHNFCR+R
Sbjct:  103 VVGDAAYGASERVVVPFPGTSLSASQDACNYYVSQCRMAIEQTYGILVRRWGILWRPMEVRIEKFEHVVNAVVRLHNFCRDR 184          
BLAST of mRNA_H-elongata_contig166504.4174.1 vs. uniprot
Match: A0A6H5K3F2_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3F2_9PHAE)

HSP 1 Score: 121 bits (303), Expect = 5.920e-31
Identity = 54/82 (65.85%), Postives = 67/82 (81.71%), Query Frame = 0
Query:    1 ILGDAAYPPSDRGLVPYPGTELPNSQNAYNYYQSQCRMAIEQKFGILVKTWGILWPPMEVHQPRFTQVVNSVIRLHNFCRNR 82
            I+GDAAYP SD+ LVPYPGT L  SQ+AYN+YQSQ R++IEQ FGI+VKTWGILW P+++   R + V+NSV+RLHNF R R
Sbjct:  262 IVGDAAYPASDQVLVPYPGTSLTRSQDAYNFYQSQARISIEQAFGIMVKTWGILWRPLDMRLERVSSVINSVVRLHNFLRRR 343          
BLAST of mRNA_H-elongata_contig166504.4174.1 vs. uniprot
Match: A0A6H5L6B6_9PHAE (DDE Tnp4 domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6B6_9PHAE)

HSP 1 Score: 119 bits (297), Expect = 4.320e-30
Identity = 54/82 (65.85%), Postives = 66/82 (80.49%), Query Frame = 0
Query:    1 ILGDAAYPPSDRGLVPYPGTELPNSQNAYNYYQSQCRMAIEQKFGILVKTWGILWPPMEVHQPRFTQVVNSVIRLHNFCRNR 82
            ++GDAAY  S+R +VP+PGT L  SQ+A NYY SQCRMAIEQ +GILV+ WGILW PMEV   +F  VVN+V+RLHNFCR+R
Sbjct:  255 VVGDAAYGASERVVVPFPGTSLSASQDACNYYVSQCRMAIEQTYGILVRRWGILWRPMEVRIEKFEHVVNAVVRLHNFCRDR 336          
BLAST of mRNA_H-elongata_contig166504.4174.1 vs. uniprot
Match: A0A6H5KCG0_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCG0_9PHAE)

HSP 1 Score: 110 bits (276), Expect = 1.950e-27
Identity = 50/80 (62.50%), Postives = 63/80 (78.75%), Query Frame = 0
Query:    1 ILGDAAYPPSDRGLVPYPGTELPNSQNAYNYYQSQCRMAIEQKFGILVKTWGILWPPMEVHQPRFTQVVNSVIRLHNFCR 80
            I+GD AYP SD+ LVPYPGT L  SQ++YN+YQSQ R+ IEQ FG +VKTWGILW P++V   R + V+N+V+RLHNF R
Sbjct:  196 IVGDGAYPASDQVLVPYPGTTLTPSQDSYNFYQSQARIFIEQAFGNMVKTWGILWRPLQVKLGRVSSVMNAVVRLHNFLR 275          
BLAST of mRNA_H-elongata_contig166504.4174.1 vs. uniprot
Match: A0A6H5K6M2_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6M2_9PHAE)

HSP 1 Score: 109 bits (273), Expect = 1.350e-26
Identity = 51/82 (62.20%), Postives = 63/82 (76.83%), Query Frame = 0
Query:    1 ILGDAAYPPSDRGLVPYPGTELPNSQNAYNYYQSQCRMAIEQKFGILVKTWGILWPPMEVHQPRFTQVVNSVIRLHNFCRNR 82
            I+GDAAYP S+R LVP PGT L  SQ+AYN+YQSQ R++IEQ FGILVKTW ILW P+ +   R   V+N+++RLHNF R R
Sbjct:  266 IVGDAAYPASNRVLVPDPGTALTLSQDAYNFYQSQARISIEQAFGILVKTWEILWKPLAIRLDRVGHVMNAIVRLHNFLRRR 347          
BLAST of mRNA_H-elongata_contig166504.4174.1 vs. uniprot
Match: A0A6H5L386_9PHAE (DDE Tnp4 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L386_9PHAE)

HSP 1 Score: 94.7 bits (234), Expect = 4.570e-21
Identity = 42/80 (52.50%), Postives = 58/80 (72.50%), Query Frame = 0
Query:    1 ILGDAAYPPSDRGLVPYPGTELPNSQNAYNYYQSQCRMAIEQKFGILVKTWGILWPPMEVHQPRFTQVVNSVIRLHNFCR 80
            +LGDAAYP S++ L PYPG  LP  ++++N++ SQ R+ IEQ FGILV TWGILW P++V     T ++ ++ RLHNF R
Sbjct:  283 VLGDAAYPLSEQLLTPYPGKNLPLGEDSFNFHLSQLRVKIEQSFGILVGTWGILWRPLKVDFAGRTDLITALFRLHNFLR 362          
BLAST of mRNA_H-elongata_contig166504.4174.1 vs. uniprot
Match: A0A6H5K540_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K540_9PHAE)

HSP 1 Score: 90.9 bits (224), Expect = 5.740e-20
Identity = 46/82 (56.10%), Postives = 58/82 (70.73%), Query Frame = 0
Query:    1 ILGDAAYPPSDRGLVPYPGTELPNSQNAYNYYQSQCRMAIEQKFGILVKTWGILWPPMEVHQPRFTQVVNSVIRLHNFCRNR 82
            ++GDAAY  S+R +VP+PGT L  SQ+A NYY SQCRMAIEQ +GILV   G+    +E        VVN+V+RLHNFCR+R
Sbjct:  184 VVGDAAYGASERVVVPFPGTSLSASQDACNYYMSQCRMAIEQTYGILVSVVGMAKVVVE-------HVVNAVVRLHNFCRDR 258          
BLAST of mRNA_H-elongata_contig166504.4174.1 vs. uniprot
Match: A0A6H5K6X9_9PHAE (DDE Tnp4 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6X9_9PHAE)

HSP 1 Score: 89.0 bits (219), Expect = 9.770e-20
Identity = 37/78 (47.44%), Postives = 55/78 (70.51%), Query Frame = 0
Query:    1 ILGDAAYPPSDRGLVPYPGTELPNSQNAYNYYQSQCRMAIEQKFGILVKTWGILWPPMEVHQPRFTQVVNSVIRLHNF 78
            I+GDAAYP  ++ L PYPG +LP  ++++N++ SQ R+ IEQ FGILV TWGILW P+ +       ++ +++ LHNF
Sbjct:  105 IIGDAAYPIGEKLLTPYPGRQLPAGEDSFNFHLSQLRVKIEQSFGILVSTWGILWTPLRMQLGGRGDLITALLHLHNF 182          
BLAST of mRNA_H-elongata_contig166504.4174.1 vs. uniprot
Match: A0A6H5KNZ9_9PHAE (DDE Tnp4 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNZ9_9PHAE)

HSP 1 Score: 89.7 bits (221), Expect = 3.400e-19
Identity = 38/78 (48.72%), Postives = 54/78 (69.23%), Query Frame = 0
Query:    1 ILGDAAYPPSDRGLVPYPGTELPNSQNAYNYYQSQCRMAIEQKFGILVKTWGILWPPMEVHQPRFTQVVNSVIRLHNF 78
            I+GDAAYP  ++ L PYPG +LP  ++++N++ SQ R+ IEQ FGILV TWGILW P+ V       ++ ++  LHNF
Sbjct:  296 IIGDAAYPIGEKLLTPYPGRQLPAGEDSFNFHLSQLRVKIEQSFGILVSTWGILWRPLRVQLGGRADLITALFHLHNF 373          
BLAST of mRNA_H-elongata_contig166504.4174.1 vs. uniprot
Match: A0A6H5JPH5_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH5_9PHAE)

HSP 1 Score: 87.8 bits (216), Expect = 4.250e-19
Identity = 38/78 (48.72%), Postives = 53/78 (67.95%), Query Frame = 0
Query:    1 ILGDAAYPPSDRGLVPYPGTELPNSQNAYNYYQSQCRMAIEQKFGILVKTWGILWPPMEVHQPRFTQVVNSVIRLHNF 78
            I+GDAAYP  ++ L PYPG  LP  ++++N++ SQ R+ IEQ FGILV TWGILW P+ V       ++ ++  LHNF
Sbjct:  150 IIGDAAYPIGEKLLTPYPGRLLPAGEDSFNFHLSQLRVKIEQSFGILVSTWGILWRPLRVQFAGRADLITALFHLHNF 227          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig166504.4174.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KNF2_9PHAE2.880e-3165.85DDE Tnp4 domain-containing protein n=2 Tax=Ectocar... [more]
A0A6H5K3F2_9PHAE5.920e-3165.85DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5L6B6_9PHAE4.320e-3065.85DDE Tnp4 domain-containing protein n=3 Tax=Ectocar... [more]
A0A6H5KCG0_9PHAE1.950e-2762.50DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5K6M2_9PHAE1.350e-2662.20DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5L386_9PHAE4.570e-2152.50DDE Tnp4 domain-containing protein (Fragment) n=1 ... [more]
A0A6H5K540_9PHAE5.740e-2056.10DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5K6X9_9PHAE9.770e-2047.44DDE Tnp4 domain-containing protein n=2 Tax=Ectocar... [more]
A0A6H5KNZ9_9PHAE3.400e-1948.72DDE Tnp4 domain-containing protein n=2 Tax=Ectocar... [more]
A0A6H5JPH5_9PHAE4.250e-1948.72DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027806Harbinger transposase-derived nuclease domainPFAMPF13359DDE_Tnp_4coord: 1..77
e-value: 5.9E-10
score: 39.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig166504contigH-elongata_contig166504:393..992 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig166504.4174.1mRNA_H-elongata_contig166504.4174.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig166504 393..992 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig166504.4174.1 ID=prot_H-elongata_contig166504.4174.1|Name=mRNA_H-elongata_contig166504.4174.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=83bp
ILGDAAYPPSDRGLVPYPGTELPNSQNAYNYYQSQCRMAIEQKFGILVKT
WGILWPPMEVHQPRFTQVVNSVIRLHNFCRNRN
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027806HARBI1_dom