prot_H-elongata_contig16630.4165.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig16630.4165.1
Unique Nameprot_H-elongata_contig16630.4165.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length93
Homology
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BLAST of mRNA_H-elongata_contig16630.4165.1 vs. uniprot
Match: A0A6G0X3B5_9STRA (Integrase catalytic domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X3B5_9STRA)

HSP 1 Score: 61.2 bits (147), Expect = 6.650e-9
Identity = 29/82 (35.37%), Postives = 46/82 (56.10%), Query Frame = 0 
Query:    8 WVCDTGASQHFSNDSAHMLDFRECQTFMRTVSGKRFSIEGYGDLILHLRSEGEVVHLKLCNVAYVPQLSHNLMSRRVVADSG 89
            WV D+GAS HF N+S+   +       +R  +G   +IEG G + L + +   +V ++L NV+Y+P L +NL S   V+  G
Sbjct:  297 WVIDSGASDHFCNNSSWFTNLEPSTGVVRAANGGDMAIEGCGSIHLEMNTPSGIVEVELQNVSYMPSLQYNLFSLSRVSQHG 378
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig16630.4165.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6G0X3B5_9STRA6.650e-935.37Integrase catalytic domain-containing protein n=1 ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig16630contigH-elongata_contig16630:7232..7510 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig16630.4165.1mRNA_H-elongata_contig16630.4165.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig16630 7232..7510 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig16630.4165.1 ID=prot_H-elongata_contig16630.4165.1|Name=mRNA_H-elongata_contig16630.4165.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=93bp
GKVEDERWVCDTGASQHFSNDSAHMLDFRECQTFMRTVSGKRFSIEGYGD
LILHLRSEGEVVHLKLCNVAYVPQLSHNLMSRRVVADSGGSYS
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