mRNA_H-elongata_contig1660.4154.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig1660.4154.1
Unique NamemRNA_H-elongata_contig1660.4154.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig1660.4154.1 vs. uniprot
Match: A0A6H5JB34_9PHAE (SufBD_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB34_9PHAE)

HSP 1 Score: 693 bits (1788), Expect = 5.110e-237
Identity = 362/521 (69.48%), Postives = 429/521 (82.34%), Query Frame = 3
Query:    6 AACGSSRTYPGGLRPARCRRVSGGMGMSGSI--EDK---TVESVMQSTMEGVNNNDVKPFVVTPRRDPRVWFDSIRTGAVPRPEALVDISKAGEMQLEAVALPHRKQEPYRYTDLESLYRTYFATAPAVGASPEAAKRAAIEPYLLETSRGQQMVFVNGVFDSALSDVSALGSVEGLVAGHLWEMEGARLDQAKDILSFLPETDADHRTTQGSLPFCSLNQACFADAAVIVVEDGVRVEKPIQVIFFSDGLEVPTVNHPRMVVTMGNDAQLSLMQNHIGIGRGGVCLANGFTRILVGDRANLVHDYLEEMGEADRMVDTISVDQSVNSTYSINQVMSGSFDSRSNVQIDLLESGAHCNVHTAALATKNQRQDTHTTIQHKARGTTCLQEQRNIVGDKADCVFKGRIVIDQIAQKTDAQQLSRTLLVSDKARVTVMPSMEIIANDVKCTHGATVADLEEEELFYLMTRGISKIQAKTLMIKSFADVVVQRFMDKNLRERITPKLLAAAPREDRAVKGEFRSI 1553
            AA G  R   G  R AR  R  G + ++  +  ED     V S++++  +GV+NN++ PFV  PRRDPRVWFD+IR GAVPRP++LV++SKAGE +L  +ALP RKQEPYRYTDLESLYRT F +A    A+ E A  AAI+P+LLE S+GQQMVFVNGVF   LSDVSALG VEGLVAGH+  +EG  LDQAK++LS+LPE DAD RTTQGSL F SLNQACFADA VI+V DGV VEKPIQVIFFS+G EVPTV+HPR+VV  G D+ ++L Q+++   RGGVCLANGFTR+LVGDRA + HDY EEM  +DR+VD +SVDQ+ NSTYS+NQV+SG+FD+R+N+QIDLLE+G+HCNV TAAL T NQRQD H+TI+HKA GTTCLQEQRN+V D ADCVFKGRIVIDQ+AQKTDA QL RTLLVSDKARVTVMPSMEIIANDVKCTHGAT+ DLE+EELFYLM+RGISKIQAKTL+IKSFAD+VV+RF+D NLRER+T KLLAAAPR DRA KG ++SI
Sbjct:  213 AAEGLRRRSTGEARSARAGRQVGRVLVATGVVTEDNQGAAVGSLLETQQKGVSNNEMNPFVRVPRRDPRVWFDAIREGAVPRPDSLVELSKAGEAELAELALPTRKQEPYRYTDLESLYRTDFKSAALTTAAAETA--AAIKPHLLEASQGQQMVFVNGVFSDELSDVSALGGVEGLVAGHIGAIEGTPLDQAKEMLSYLPEKDADFRTTQGSLAFASLNQACFADAGVIIVADGVTVEKPIQVIFFSEGEEVPTVSHPRLVVKAGADSHMTLTQSYLS--RGGVCLANGFTRVLVGDRATVTHDYAEEMSASDRLVDIVSVDQTTNSTYSVNQVLSGAFDARANLQIDLLETGSHCNVFTAALTTNNQRQDVHSTIRHKAEGTTCLQEQRNVVSDTADCVFKGRIVIDQVAQKTDANQLCRTLLVSDKARVTVMPSMEIIANDVKCTHGATICDLEDEELFYLMSRGISKIQAKTLVIKSFADIVVKRFIDPNLRERLTVKLLAAAPRGDRATKGTYQSI 729          
BLAST of mRNA_H-elongata_contig1660.4154.1 vs. uniprot
Match: D8LLY7_ECTSI (FeS assembly protein SufD n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLY7_ECTSI)

HSP 1 Score: 619 bits (1597), Expect = 2.540e-211
Identity = 323/473 (68.29%), Postives = 384/473 (81.18%), Query Frame = 3
Query:    6 AACGSSRTYPGGLRPARCRRVSGGMGMSGSI--EDK---TVESVMQSTMEGVNNNDVKPFVVTPRRDPRVWFDSIRTGAVPRPEALVDISKAGEMQLEAVALPHRKQEPYRYTDLESLYRTYFATAPAVGASPEAAKRAAIEPYLLETSRGQQMVFVNGVFDSALSDVSALGSVEGLVAGHLWEMEGARLDQAKDILSFLPETDADHRTTQGSLPFCSLNQACFADAAVIVVEDGVRVEKPIQVIFFSDGLEVPTVNHPRMVVTMGNDAQLSLMQNHIGIGRGGVCLANGFTRILVGDRANLVHDYLEEMGEADRMVDTISVDQSVNSTYSINQVMSGSFDSRSNVQIDLLESGAHCNVHTAALATKNQRQDTHTTIQHKARGTTCLQEQRNIVGDKADCVFKGRIVIDQIAQKTDAQQLSRTLLVSDKARVTVMPSMEIIANDVKCTHGATVADLEEEELFYLMTRGISKIQ 1409
            AA G  R   G  R A+  R   G+  +  +  ED       S++++  +GV+NN++KPFV  PRRDPR+WFD+IR GAVPRP++LV++SKAGE +L  +ALP RKQEPYRYTDLESLYRT F +A     + E A  AAI+P+LLE S+GQQMVFVNGVF   LSDVSALG VEGLVAGH+  +EGA LDQAK++LS+LPE DAD RTTQGSL F SLNQACFADA VI+V DGV VEKPIQVIFFS+G E PTV+HPR+VV  G D+ ++L Q+++   RGGVCLANGFTR+LVGDRA + HDY EEM  +DR+VDT+SVDQ+ NSTYS+NQV+SG+FD+R+N QIDLLE+G+HCN+ TAAL T NQRQD H+TI+HKA GTTCLQEQRN+V D ADCVFKGRIVIDQ+AQKTDA QL RTLLVSDKARVTVMPSMEIIANDVKCTHGAT+ DLE+EELFYLM+RGISKIQ
Sbjct:   51 AAQGLRRRSTGEARSAQAGRQGDGVLSATGVATEDNQGAVAGSLLETQQKGVSNNEMKPFVRVPRRDPRMWFDAIREGAVPRPDSLVELSKAGEAELAELALPTRKQEPYRYTDLESLYRTDFTSAAPTTTAAETA--AAIKPHLLEASQGQQMVFVNGVFSDELSDVSALGGVEGLVAGHIGAIEGAPLDQAKEMLSYLPEKDADFRTTQGSLAFASLNQACFADAGVIMVADGVTVEKPIQVIFFSEGEEGPTVSHPRLVVKAGADSHVTLTQSYLS--RGGVCLANGFTRVLVGDRATVTHDYAEEMSASDRLVDTVSVDQTTNSTYSVNQVLSGAFDARANFQIDLLETGSHCNIFTAALTTNNQRQDVHSTIRHKAEGTTCLQEQRNVVSDTADCVFKGRIVIDQVAQKTDANQLCRTLLVSDKARVTVMPSMEIIANDVKCTHGATICDLEDEELFYLMSRGISKIQ 519          
BLAST of mRNA_H-elongata_contig1660.4154.1 vs. uniprot
Match: A0A836CQZ7_9STRA (SufBD_N domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CQZ7_9STRA)

HSP 1 Score: 363 bits (933), Expect = 5.260e-113
Identity = 211/467 (45.18%), Postives = 293/467 (62.74%), Query Frame = 3
Query:  183 RRDPRVWFDSIRTGAVPRPEALVDISKAGEMQLEAVALPHRKQEPYRYTDLESLYRTYFATAPAVGASPEAAKRAAIEPYLLETSRGQQMVFVNGVFDSALSDVSALGSVEGLVAGHLWEMEGARLDQAK--DILSFLPETDADHRTTQGSLPFCSLNQACFADAAVIVVEDGVRVEKPIQVIFFS------DGLEVPTVNHPRMVVTMGNDAQLSLMQNHIGIGRGGVCLANGFTRILVGDRANLVHDYLEEMGEADRMVDTISVDQSVNSTYSINQVMSGSFDSRSNVQIDLLESGAHCNVHTAALATKNQRQDTHTTIQHKARGTTCLQEQRNIVGDKADCVFKGRIVIDQIAQKTDAQQLSRTLLVSDKARVTVMPSMEIIANDVKCTHGATVADLEEEELFYLMTRGISKIQAKTLMIKSFADVVVQRFMDKNLRERITPKLLAAAPREDRAV--KGEFRSI 1553
            R DPR WF +++  A   P    +++ AG   L+ V LPHRKQEPYRYTDLE+++R  +     +  S E A++     YL E S+GQQ+VFVNG F++ LSD SA+   EG+  G      GA   QA    +L  LPE  A+  T QGSLPF +LNQACFADAA +V+   V VE+PIQV+F +      +G E   + HPR+ +  G  +   +MQ+++G G      AN  TR +VG  A L H + +E   + + +DT+  D +  + YS++ V  G   +RSN+Q++L  + AHCN++ AAL + +Q  D HT + H A  TT  Q+ RNIV D +DC+FKGR+ +D IAQ TDA QL RTL++SD+ARVT MPS+EI A+DVKC HGATVADL+EE LFYL  RGI+  +A+ L+IK FA  +++   D NL+ R+  KL++  P+  RAV  +G F SI
Sbjct:   11 RADPRTWFGALQQQAA-TPAPFRELASAGAATLDEVDLPHRKQEPYRYTDLEAIFRHSYDATAGLPVSQEFAQK-----YLSEASKGQQLVFVNGRFNAQLSDTSAVP--EGVYVGSAL---GAGEHQAAVMGVLDHLPEVGANKNTCQGSLPFAALNQACFADAAAVVIPPNVTVEQPIQVLFVTHAPKENEGGEGGAICHPRLAIVAGEGSSALVMQSYVGEGD---YFANCVTRSVVGKGAKLSHTHSQEQSASAQHLDTVVADLAEEAVYSLSMVACGGLFARSNIQVELNGAKAHCNLNAAALCSGDQSVDFHTQMGHAAPDTTMEQQHRNIVADSSDCIFKGRVRVDGIAQGTDAHQLCRTLMLSDRARVTAMPSLEITADDVKCAHGATVADLDEESLFYLGCRGINAAEARALVIKGFAFDMIKALPDTNLQARVLEKLISMTPKSSRAVTAEGAFSSI 463          
BLAST of mRNA_H-elongata_contig1660.4154.1 vs. uniprot
Match: A0A7S2MCQ0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MCQ0_9STRA)

HSP 1 Score: 284 bits (726), Expect = 3.640e-82
Identity = 180/465 (38.71%), Postives = 263/465 (56.56%), Query Frame = 3
Query:  201 WFDSI--RTGAVPRPEALVDISKAGEMQLEAVALPHRKQEPYRYTDLESLYRTYFATAPAVGASPEAAKRAAIEPYLLETSRGQQMVFVNGVFDSALSDVSALGSVEGLVAGHLWEMEGARLDQAKDILSFLPETDA--DHRTTQGSLPFCSLNQACFADAAVIVVEDGVRVEKPIQVIFFSDGLEVPTVNHPRMVVTMGNDAQLSLMQNHIGIGRGGVCLANGFTRILVGDRANLVHDYLEEMGEADRMVDTISVDQSVNSTYSINQVMSGSFDSRSNVQIDLLESGAHCNVHTAALATKN-----QRQDTHTTIQHKARGTTCLQEQRNIVGDKADCVFKGRIVIDQIAQKTDAQQLSRTLLVSDKARVTVMPSMEIIANDVKCTHGATVADLEEEELFYLMTRGISKIQAKTLMIKSFADVVVQRFMDK--NLRERITPKLLAAAPRED---RAVKGEFRSI 1553
            WF+ +  ++   P  + L +    G+  L  V  P RK EP+RYTDL S++ T +     +G       R  IEPYL E S   QMVF++GVF  +LSD+SALGS   L  G L  +    L +    L  +PE D   D RT QGS  F SLNQAC +D A I V +GV VE+PIQV+F S     P+++H ++VV + + A  SL+Q++ G+G G     N  T + +G  A L H Y +E     + ++T++V    +S Y +  V SGS  SR N   D   +G +  V T ++         Q  D H++I H A  +   Q+ RN+V  K +C+FKGRI + Q+AQ TD++QL RTLL++D A+V +MPS+EI+A+ VKC HGATV+DL  EELFYL++RGI +  AK ++ + F   V++  +D       R+   +    P +D   R+V+ E+ S+
Sbjct:   66 WFERVSRKSALSPVVDLLSNTRLKGKDALTRVETPRRKLEPWRYTDLTSMFGTDYCRPQGLGD----VSRETIEPYL-EKSASVQMVFMDGVFCESLSDMSALGS---LSIGGLSSLTPDVLPKVLQALEKVPEMDPTPDRRTCQGSAAFGSLNQACLSDCAYIFVPEGVEVERPIQVLFMSSATLAPSISHTQLVVVVESGASASLLQSYAGVGDGDTYFTNALTTVELGAGATLKHAYAQEAKLGAQHIETMTVSTDGDSIYELTAVCSGSRQSRFN--FDSYMNGENALVDTVSVLLSGGVGSRQVNDFHSSITHNAVNSFSKQKHRNMVSTKGECIFKGRIAVPQVAQGTDSEQLCRTLLLTDDAKVVMMPSLEIVADQVKCEHGATVSDLSGEELFYLLSRGIDRTAAKGILARGFLTEVIRDRLDAYPQTSSRLDQSIKQIVPEDDGLERSVEYEYSSV 520          
BLAST of mRNA_H-elongata_contig1660.4154.1 vs. uniprot
Match: A0A7S2W6I7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W6I7_9STRA)

HSP 1 Score: 273 bits (697), Expect = 1.100e-77
Identity = 167/439 (38.04%), Postives = 246/439 (56.04%), Query Frame = 3
Query:  201 WFDSIRTGAVPR---PEALVDISKAGEMQLEAVALPHRKQEPYRYTDLESLYRTYFATAPAVGASPEAAKRAAIEPYLLETSRGQQMVFVNGVFDSALSDVSALGSVEGLVAGHLWEMEGARLDQAK-DILSFLPETD-ADHRTTQGSLPFCSLNQACFADAAVIVVEDGVRVEKPIQVIFFSDG-LEVPTVNHPRMVVTMGNDAQLSLMQNHIGIGRGGVCLANGFTRILVGDRANLVHDYLEEMGEADRMVDTISVDQSVNSTYSINQVMSGSFDSRSNVQIDLLESGAHCNVHTAALATKNQRQDTHTTIQHKARGTTCLQEQRNIVGDKADCVFKGRIVIDQIAQKTDAQQLSRTLLVSDKARVTVMPSMEIIANDVKCTHGATVADLEEEELFYLMTRGISKIQAKTLMIKSFADVVVQRFMDKNLRERITPKL 1499
            WF++    AVP    P  +V+    G+  L    +P RKQE +R+ +++    T FA  P+  A   +    A+ PY+   + G   VFV+GVF   LSD   LGSV   V        G RL +    +L  LPE   +DHRT QG+  F +LNQACF D+A I V DGV+VE+P++V+F S         ++PR ++ MG DA+LSL+Q++  +G G     NG T + + + A L H Y++++       D +  + S    +     + G   SR N  + L   GA   V +  +    Q  D H++I H    TT  Q+QRNI+G ++D VF+GRI +DQ AQ TD++QL R+LL++D+A++TVMPS+EIIA+ V CTHGATVADL  +ELFYL +RG++   A+ L+ K F      RF  K+   ++  K+
Sbjct:   98 WFEAALEAAVPDTGLPPQVVEKRSEGKTLLPDHNVPQRKQEAWRFNNIQ----TMFAIEPSTPADSSSVSSDALAPYMYAETAGATAVFVDGVFRPELSD---LGSVPDNVVFGAVSSVGDRLSETHLGMLDELPEVKGSDHRTNQGAAAFAALNQACFVDSACIYVPDGVQVEQPVEVLFVSTASTSARPTSYPRAIIAMGKDAELSLVQSYATVG-GDKHFTNGLTVVAIDENAKLDHFYVQDVAAGATHYDALIANVSSGGEHKFCTTLLGGEQSRLNCDVHLNGDGARAEVVSVLVTDNRQMADFHSSISHHVENTTSFQQQRNILGGRSDVVFRGRIKVDQEAQNTDSEQLCRSLLLTDRAKITVMPSLEIIADQVVCTHGATVADLSADELFYLQSRGLTPELARALLTKGFVREFADRFTCKDALGQLDDKI 528          
BLAST of mRNA_H-elongata_contig1660.4154.1 vs. uniprot
Match: A0A7S4DBS2_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DBS2_HETAK)

HSP 1 Score: 253 bits (647), Expect = 2.150e-72
Identity = 158/389 (40.62%), Postives = 232/389 (59.64%), Query Frame = 3
Query:  441 GQQMVFVNGVFDSALSDVSALGSVEGLVAGHLWEMEGARLDQAKDILSFLPETDADH--------RTTQGSLPFCSLNQACFADAAVIVVEDGVRV-EKPIQVIFFSDGLEVPTVNHP------RMVVTMGNDAQLSLMQNHIGIGRGGVCLANGFTRILVGDRANLVHDYLEEMGEAD--RMVDTISVDQSVNSTYSINQVMSGSFDSRSNVQIDLLESGAHCNVHTAALATKNQRQDTHTTIQHKARGTTCLQEQRNIVGDKADCVFKGRIVIDQIAQKTDAQQLSRTLLVSDKARVTVMPSMEIIANDVKCTHGATVADLEEEELFYLMTRGISKIQAKTLMIKSFADVVVQRFMDKNLRERITPKLLAAAP-REDRAVKGEFRSI 1553
            G+++VFV+GVF++ALSD++ + +  G+VAG +  +   +L  A   LSF+PE  AD+        RT QGS PF +LN A   DAAV++V +GV   EKP +V+F +   E      P      R+ V  G  A+L+L+Q+  G+G     LANG  R+ VG  A + H  L+E   A   R ++T+  +   +  Y  + V  G  D+R NVQ++L    AHC +  AA   ++Q    +TTI+H A  TT  Q QRN++G   D V+KGRI ++++AQ+TDA QL  +L++SD+ARVT MPSMEIIA+ VKCTHGATV+D+ EEELFY   RGI +  A+ L++  FAD   +    +  + R+T K+ +  P  E R +   ++SI
Sbjct:   12 GRRLVFVDGVFEAALSDLADVPA--GVVAGSVAALSAEQLATALPALSFVPELGADNARLGHENKRTCQGSAPFGALNLAALQDAAVLLVPEGVDAGEKPFEVMFIASSEEAEAEGAPARLSSHRLAVVAGAGARLALVQHACGLGSRH--LANGLARVEVGAGAAVRHALLQEHPAAPGARQLETVCAEVGEDGRYEFSTVALGGGDARLNVQVELSGERAHCGLRGAAFGGQDQNLAMYTTIRHNAEATTTEQVQRNVLGKNTDVVWKGRIRVEEVAQQTDADQLCASLMLSDQARVTAMPSMEIIADQVKCTHGATVSDMSEEELFYFAARGIGRQMARELIVLGFADEAAEEINCEKFQARLTEKVQSILPPSESRTLGAIYQSI 396          
BLAST of mRNA_H-elongata_contig1660.4154.1 vs. uniprot
Match: A0A7S2HD05_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2HD05_9EUKA)

HSP 1 Score: 254 bits (649), Expect = 3.840e-71
Identity = 171/463 (36.93%), Postives = 246/463 (53.13%), Query Frame = 3
Query:  201 WFDSIRTGAVPRPEALVDISKA-GEMQLEAVALPHRKQEPYRYTDLESLYRTYFATAPAVGASPEAAKRAAIEPYLLETSRGQQMVFVNGVFDSALSDVSALGSVEGLVAGHLWEMEGARLDQAKDIL-SFLPETDADHRTTQGSLPFCSLNQACFADAAVIVVEDGVRVEKPIQVIFFS-----DGLE---------VPTVNHPRMVVTMGNDAQLSLMQNHIGIGRGGVCLANGFTRILVGDRANLVHDYLEEMGEADRMVDTISVDQSVNSTYSINQVMSGSFDSRSNVQIDLLESGAHCNVHTAALATKNQRQDTHTTIQHKARGTTCLQEQRNIVGDKADCVFKGRIVIDQIAQKTDAQQLSRTLLVSDKARVTVMPSMEIIANDVKCTHGATVADLEEEELFYLMTRGISKIQAKTLMIKSFADVVVQRFMDKNLRERITPKLLAAAPREDRAVKGE 1541
            WF      A   PE L++  +A   M L  +  P RK E +R  DL SL  +   T PA  A+ E   +     + +E S G ++V V+GV    LSD+SAL +  G+ AG L  ++G   D A   L   LPE +ADHRT  G   F +LNQA  AD   + V  G++VE+P+ V+  S      GLE             +HP +V+++   A LS++Q +   G  G    NG TR+ +G  A LVH Y++E       VD++ VD      Y    + SG   SR N+Q++L   GAH ++    LAT NQ  D H+ + H +   T  QEQRN V   A  VFKG +V+ Q +  T A QL RTLL+SD AR+ + P++EI  +DV+CTHGATV+DL++E +FYL  RG+S++ A+ L+++ +A   + +      R+R   K    AP  D  V+ E
Sbjct:   69 WFQGAVDAASGDPEPLLEELRATAAMALSGLEFPRRKDEAWRRCDLTSLRASRIVT-PAGTANVE---QLLASCHSVEDSVGMRLVLVDGVCSPELSDLSALPA--GMSAGSLCSVQGDAHDGALAALRQALPEAEADHRTALGVHTFAALNQASLADVISVHVPAGMQVEQPLHVVILSTAGASSGLEDGESAAPQRTLAASHPNIVLSLAEGASLSMLQQY---GGEGGTFTNGLTRVNLGTDAKLVHSYVQEQALESVHVDSVLVDVGERGLYESQLLQSGGRISRVNIQVNLERPGAHSSLKGLTLATGNQLADVHSRVVHASGDCTSQQEQRNAVAGAARVVFKGAVVVPQGSDNTTANQLCRTLLLSDDARIDMQPTLEIDTDDVQCTHGATVSDLDDEMIFYLQARGLSRLDARALLLEGWARSALDKVPSAGARQRAAVKAATLAPDSDIRVRRE 522          
BLAST of mRNA_H-elongata_contig1660.4154.1 vs. uniprot
Match: A0A0M0J7I3_9EUKA (Assembly protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0J7I3_9EUKA)

HSP 1 Score: 228 bits (582), Expect = 1.130e-61
Identity = 154/466 (33.05%), Postives = 238/466 (51.07%), Query Frame = 3
Query:  201 WF-DSIRTGAVPRPEALVDISKAGEMQLEAVALPHRKQEPYRYTDLESLYRTYFATAPAVGASPEAAKRAAIEPYLLETSRGQQMVFVNGVFDSALSDVSALGSVEGLVAGHLWEMEGARLDQAKDILSF-LPETDADH----RTTQGSLPFCSLNQACFADAAVIVVEDGVRVEKPIQVIFFSDG------LEVP---------TVNHPRMVVTMGNDAQLSLMQNHIGIGRGGVCLANGFTRILVGDRANLVHDYLEEMGEADRMVDTISVDQSVNSTYSINQVMSGSFDSRSNVQIDLLESGAHCNVHTAALATKNQRQDTHTTIQHKARGTTCLQEQRNIVGDKADCVFKGRIVIDQIAQKTDAQQLSRTLLVSDKARVTVMPSMEIIANDVKCTHGATVADLEEEELFYLMTRGISKIQAKTLMIKSFADVVVQRFMDKNLRERITPKLLAAAPREDRAVK 1535
            WF D+  T   P    L  +  A    L  +  P RK EP+R  DL SL  +    + A  AS  AA     +      S G ++V V+GV   ALSD+SAL   EG+    L    GA LD A   L   LPE+ A+      T  G   F +LNQA  AD  VI V  GV +E+P+ V+  S G      ++ P           +HP ++V++   A L L Q++         L NG TR+ +G  A L H Y++E G      D++ VD    ++YS   + SG   +R+N  ++L    A  N+   ++A + Q  D H+ + H +   T  QEQRN+V  ++  V+KG +V+ + +  T+A+QL RTLL+SD ARV V P++EI  ++V+CTHGAT++DL++E +FYL  RG+S+  A+ L++  +    +     +++++R   +        D+ V+
Sbjct:   72 WFADAAATSPAPSSPMLAPLRAAAAAALPTIYFPGRKDEPFRRCDLSSLQASRLVPSVAKDASAAAALAVCSDA----DSAGMRLVLVDGVCSQALSDLSALP--EGVSVSSLNTTSGAALDGALAALQGPLPESGANTAAAMNTLLGVYGFAALNQASLADVCVINVPKGVTIERPLHVVLLSSGGVAAAPMQAPGTEGAAPVLPASHPNLLVSLAEGASLKLAQHYFACDAQAPYLCNGVTRVQLGRSATLQHSYVQEQGRMSIHFDSVLVDVGAGASYSSTMLQSGGRIARTNHLVELTGEKASSNLRALSMAAEAQLVDVHSKVVHVSGECTSQQEQRNVVAGRSRVVWKGAVVVPRGSDNTNAKQLCRTLLLSDDARVDVQPTLEIDTDEVECTHGATISDLDDEMVFYLQARGLSRPDARALLLSGWVRDALALVPSESVKQRAVARAAKVGADYDKEVR 531          
BLAST of mRNA_H-elongata_contig1660.4154.1 vs. uniprot
Match: A0A7S3RNJ1_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3RNJ1_9SPIT)

HSP 1 Score: 222 bits (566), Expect = 3.000e-60
Identity = 159/469 (33.90%), Postives = 236/469 (50.32%), Query Frame = 3
Query:  177 TPRRDPRV---WFDSIRTGAVPRPEALVDISKAGEMQLEAVALPHRKQEPYRYTDLESLYRTYFATAPAVGASPEAAKRAAI----EPYLLETSRGQQMVFVNGVFDSALSDVSAL------GSVEGLVAGHLWEMEGARLDQAKDILSFLPETDADHRTTQGSLPFCSLNQACFADAAVIVVEDGVRVEKPIQVIFFSDG---LEVPTVNHPRMVVTMGNDAQLSLMQNHIGIGRGGVCLANGFTRILVGDRANLVHDYLEEMGEADRMVDTISVDQSVNSTYSINQVMSGSFDSRSNVQIDLLESGAHCNVHTAALATKNQRQDTHTTIQHKARGTTCLQEQRNIVGDKADCVFKGRIVIDQIAQKTDAQQLSRTLLVSDKARVTVMPSMEIIANDVKCTHGATVADLEEEELFYLMTRGISKIQAKTLMIKSFADVVVQRFMDKNLRERITPKLLAAAPREDRAVK 1535
            TPR  P     W         P    L  I +     L     P RK E +R TDL SL+    AT     A P+A   A +    +    E     ++VFV+GV D+ LS++ AL      G + GL A    ++  A +   ++    LPE  ADHRT  G   F  LNQA  AD   I +  GV+V  PI+++  S G    +    +HP +VV M   +++ LMQ + G G       NG TRI +   A+L H Y++E       +D++ V     + Y    V SG   +R N+ ++L    A  ++   +LA   Q  D H+ ++H +R     QEQRN V  +A  VF+G + +   A  T A QL R+LL+SD+ARV V P++EI+ +DV+CTHGATVADL++E +FYL +RG+S+ QA+ L++  +A  V+ +        R++ K  AA   E+ A +
Sbjct:    2 TPRAPPAAADPWLTQALAVRRPAANGLASIREEASAALAEARRPGRKDEAWRRTDLSSLFA---ATLAPPAAHPDAQFVAQMLDDNDNGTEEAQPSARLVFVDGVVDAELSELGALPAGAYAGPIAGLGAVASDDVVAAVIAAVRE----LPEQGADHRTELGCYTFSVLNQAALADVTCIYLPRGVKVTSPIRLLHLSSGGANTDALPTSHPNVVVWMEEQSEMLLMQQYCGTG---AYFTNGLTRIRLDANASLAHAYVQEQSSEAVHIDSVLVRCDAGARYDTQVVQSGGRIARVNLGVELAGPHATTSISGISLANDGQLSDLHSAVRHASRDCVSGQEQRNAVAGRARVVFRGAVQVPLGADNTTANQLCRSLLLSDRARVDVSPNLEILTDDVQCTHGATVADLDDEMIFYLQSRGLSRAQARVLILAGWARSVMDKVPSAGAVRRVSTK--AAELAEEGAAR 458          
BLAST of mRNA_H-elongata_contig1660.4154.1 vs. uniprot
Match: A0A7S1L978_ALECA (Hypothetical protein n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1L978_ALECA)

HSP 1 Score: 223 bits (567), Expect = 2.330e-59
Identity = 144/456 (31.58%), Postives = 247/456 (54.17%), Query Frame = 3
Query:  201 WFDSIRTGAVPRPEALVDISKAGEMQLEAVALPHRKQEPYRYTDLESLYRTYFATAPAVGASPEAAKRAAIEPYLLETSRGQ-QMVFVNGVFDSALSDVSALGSVEGLVAGHLWEMEGARLD-QAKDILSFLPETDA---DHRTTQGSLPFCSLNQACFADAAVIVVEDGVRVEK-----PIQVIFFSDGLEVPTVNHPRMVVTMGNDAQLSLMQNHIGIGRGGVCLANGFTRILVGDRANLVHDYLEEMGEADRMVDTISVDQSVNSTYSINQVMSGSFDSRSNVQIDLLESGAHCNVHTAALATKNQRQDTHTTIQHKARGTTCLQEQRNIVGDKADCVFKGRIVIDQIAQKTDAQQLSRTLLVSDKARVTVMPSMEIIANDVKCTHGATVADLEEEELFYLMTRGISKIQAKTLMIKSFADVVVQ--RFMDKNLRERITPKL--LAAAPREDR 1526
            WF S+      +P     +S+ G   L   A P  +QEP+RYTDL++L    +A    +   P+ A+R A+   L +   G  ++VF++G   S  S     G    +       ++G  +  +  D+L  LPE D      R + G     +LNQA F D A + +    R+E+       +V+F S G  +P+V  PR+++ +G + +L ++++H+ +      L NG  R+LV + A +VHD L++  E  R V +++ + +  ++Y +  V +GS  +R NV + L    A C+     +A+  Q+ D H+ I H+  G +  Q+ +NIVGD A+C+FKG I +D+ AQ+T + Q+ R+LL+S KA+V  MP ++I A+DV C+HGA V +L+E+++FYL +RG+   +A++L++ +F   ++   R       +R+  KL  LAA+    R
Sbjct:  108 WFQSLLEDREGQPFDAA-LSERGAAALGQAAPPLGRQEPWRYTDLDTLL---YADQSPIDPLPDEAQREALSQLLEDKQDGVLRLVFIDGTLSSEFSSSQNDGENCFVGGREALRLQGEGITTRVNDLLQPLPEVDMMKFHSRDSLGCAKLAALNQALFKDCACVCIPSDSRLEEHSAPTEAEVVFVSTG-SLPSVCSPRVLIDVGRNQRLHVVESHLSLDPRDTRLTNGICRVLVAEGAEVVHDLLQQRAEGARFVGSLAAEVAERASYKLRVVQTGSRTARLNVMVLLAGEAATCDASATMVASDKQQLDLHSLIHHRVAGCSSKQQHKNIVGDTAECIFKGSITVDKEAQQTKSSQICRSLLLSKKAKVKAMPCLQIRADDVACSHGAAVTELDEKQVFYLASRGLDGGEARSLLLTAFPQDLLAGLRTSSPKANDRVLEKLKSLAASQASSR 558          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig1660.4154.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JB34_9PHAE5.110e-23769.48SufBD_N domain-containing protein n=1 Tax=Ectocarp... [more]
D8LLY7_ECTSI2.540e-21168.29FeS assembly protein SufD n=1 Tax=Ectocarpus silic... [more]
A0A836CQZ7_9STRA5.260e-11345.18SufBD_N domain-containing protein n=1 Tax=Tribonem... [more]
A0A7S2MCQ0_9STRA3.640e-8238.71Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2W6I7_9STRA1.100e-7738.04Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S4DBS2_HETAK2.150e-7240.62Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A7S2HD05_9EUKA3.840e-7136.93Hypothetical protein n=1 Tax=Haptolina brevifila T... [more]
A0A0M0J7I3_9EUKA1.130e-6133.05Assembly protein n=1 Tax=Chrysochromulina tobinii ... [more]
A0A7S3RNJ1_9SPIT3.000e-6033.90Hypothetical protein (Fragment) n=1 Tax=Strombidin... [more]
A0A7S1L978_ALECA2.330e-5931.58Hypothetical protein n=1 Tax=Alexandrium catenella... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig1660contigH-elongata_contig1660:2153..8057 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score625.2
Seed ortholog evalue2.7e-176
Seed eggNOG ortholog2880.D8LLY7
Preferred namesufD
KEGG koko:K09015
GOsGO:0000003,GO:0003006,GO:0003674,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006790,GO:0006996,GO:0007275,GO:0008150,GO:0008152,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009657,GO:0009668,GO:0009790,GO:0009791,GO:0009793,GO:0009987,GO:0010027,GO:0010154,GO:0016043,GO:0016226,GO:0022414,GO:0022607,GO:0031163,GO:0032501,GO:0032502,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044085,GO:0044237,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0048316,GO:0048608,GO:0048731,GO:0048856,GO:0051186,GO:0061024,GO:0061458,GO:0071840
EggNOG free text desc.thylakoid membrane organization
EggNOG OGs2QSI1@2759,COG0719@1
Ec32 ortholog descriptionSUF system FeS cluster assembly, SufBD
Ec32 orthologEc-14_002160.1
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000
Hectar predicted targeting categoryother localisation
Exons8
Model size2739
Cds size1479
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig1660.4154.1prot_H-elongata_contig1660.4154.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig1660 2230..6874 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929971.8805115-UTR-H-elongata_contig1660:2152..22291622929971.8805115-UTR-H-elongata_contig1660:2152..2229Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig1660 2153..2229 +
1691679229.6085627-UTR-H-elongata_contig1660:2152..22291691679229.6085627-UTR-H-elongata_contig1660:2152..2229Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig1660 2153..2229 +
1622929972.074982-UTR-H-elongata_contig1660:6874..80571622929972.074982-UTR-H-elongata_contig1660:6874..8057Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig1660 6875..8057 +
1691679229.69301-UTR-H-elongata_contig1660:6874..80571691679229.69301-UTR-H-elongata_contig1660:6874..8057Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig1660 6875..8057 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929971.9045713-CDS-H-elongata_contig1660:2229..24141622929971.9045713-CDS-H-elongata_contig1660:2229..2414Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1660 2230..2414 +
1691679229.619533-CDS-H-elongata_contig1660:2229..24141691679229.619533-CDS-H-elongata_contig1660:2229..2414Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1660 2230..2414 +
1622929971.9210002-CDS-H-elongata_contig1660:3785..40891622929971.9210002-CDS-H-elongata_contig1660:3785..4089Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1660 3786..4089 +
1691679229.6286047-CDS-H-elongata_contig1660:3785..40891691679229.6286047-CDS-H-elongata_contig1660:3785..4089Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1660 3786..4089 +
1622929971.9425983-CDS-H-elongata_contig1660:4261..44141622929971.9425983-CDS-H-elongata_contig1660:4261..4414Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1660 4262..4414 +
1691679229.6381645-CDS-H-elongata_contig1660:4261..44141691679229.6381645-CDS-H-elongata_contig1660:4261..4414Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1660 4262..4414 +
1622929971.967154-CDS-H-elongata_contig1660:4688..48651622929971.967154-CDS-H-elongata_contig1660:4688..4865Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1660 4689..4865 +
1691679229.6477754-CDS-H-elongata_contig1660:4688..48651691679229.6477754-CDS-H-elongata_contig1660:4688..4865Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1660 4689..4865 +
1622929971.9832056-CDS-H-elongata_contig1660:5027..51621622929971.9832056-CDS-H-elongata_contig1660:5027..5162Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1660 5028..5162 +
1691679229.656642-CDS-H-elongata_contig1660:5027..51621691679229.656642-CDS-H-elongata_contig1660:5027..5162Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1660 5028..5162 +
1622929972.003121-CDS-H-elongata_contig1660:5351..55371622929972.003121-CDS-H-elongata_contig1660:5351..5537Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1660 5352..5537 +
1691679229.6657379-CDS-H-elongata_contig1660:5351..55371691679229.6657379-CDS-H-elongata_contig1660:5351..5537Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1660 5352..5537 +
1622929972.0235581-CDS-H-elongata_contig1660:5884..60761622929972.0235581-CDS-H-elongata_contig1660:5884..6076Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1660 5885..6076 +
1691679229.674794-CDS-H-elongata_contig1660:5884..60761691679229.674794-CDS-H-elongata_contig1660:5884..6076Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1660 5885..6076 +
1622929972.0530522-CDS-H-elongata_contig1660:6727..68741622929972.0530522-CDS-H-elongata_contig1660:6727..6874Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1660 6728..6874 +
1691679229.6838846-CDS-H-elongata_contig1660:6727..68741691679229.6838846-CDS-H-elongata_contig1660:6727..6874Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1660 6728..6874 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig1660.4154.1

>prot_H-elongata_contig1660.4154.1 ID=prot_H-elongata_contig1660.4154.1|Name=mRNA_H-elongata_contig1660.4154.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=493bp
MGMSGSIEDKTVESVMQSTMEGVNNNDVKPFVVTPRRDPRVWFDSIRTGA
VPRPEALVDISKAGEMQLEAVALPHRKQEPYRYTDLESLYRTYFATAPAV
GASPEAAKRAAIEPYLLETSRGQQMVFVNGVFDSALSDVSALGSVEGLVA
GHLWEMEGARLDQAKDILSFLPETDADHRTTQGSLPFCSLNQACFADAAV
IVVEDGVRVEKPIQVIFFSDGLEVPTVNHPRMVVTMGNDAQLSLMQNHIG
IGRGGVCLANGFTRILVGDRANLVHDYLEEMGEADRMVDTISVDQSVNST
YSINQVMSGSFDSRSNVQIDLLESGAHCNVHTAALATKNQRQDTHTTIQH
KARGTTCLQEQRNIVGDKADCVFKGRIVIDQIAQKTDAQQLSRTLLVSDK
ARVTVMPSMEIIANDVKCTHGATVADLEEEELFYLMTRGISKIQAKTLMI
KSFADVVVQRFMDKNLRERITPKLLAAAPREDRAVKGEFRSI*
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mRNA from alignment at H-elongata_contig1660:2153..8057+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig1660.4154.1 ID=mRNA_H-elongata_contig1660.4154.1|Name=mRNA_H-elongata_contig1660.4154.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=5905bp|location=Sequence derived from alignment at H-elongata_contig1660:2153..8057+ (Himanthalia elongata Himel1 dioecious)
TAAATGCAGCCTGCGGCTCAAGTCGAACGTACCCTGGAGGGCTTAGGCCG GCGAGATGCCGTCGGGTAAGTGGTGGCATGGGGATGTCTGGATCTATCGA GGATAAGACGGTGGAGAGCGTGATGCAGTCGACAATGGAGGGTGTGAATA ATAACGACGTGAAGCCTTTCGTAGTGACGCCGAGACGAGACCCTAGGGTT TGGTTCGACTCGATCAGAACTGGGGCGGTGCCGCGGCCTGAAGCACTCGT GGACATTTCCAAGTGAGACTAGCTGCATCAGGATCGCTTTATTATATGCG TCACAGTCTTTTTACGTGGTACATGCTGCCTTCATATTCGTAGTTGGCGA AGAAGGTGCCCAAAACAATGGTCTTGTAATTTGGTCATGTTTTGTGTGTG CGGTGGATTTGCTAGCAGTCACTTTATGAGAGCTACATACAGTAGCTCTT AGTCCCTCTGTCGGTTCTCTGACCCCTTTTTTGTATACTGTAATCAAACA CGAGTATCCTTCCAAAACGCGGAGTACGTTGACTCTTACTCCTTGTCATG TACGCTTGGCATAGTTGCGTCGAGAGACGGCTTGTGCTGCTACGGGCTGC TGCATATTTTCAAAAACGTGGCCGTTGTCAGAATAACCATAGTTCGGACT ACGGCATGGAGGCGGGGTGTTTATACACGTGTTGTCATTACATATAGCAG TAAAGCATGGATCAACCAGATTTGGTTGCCAAGCCTGCTCATGGTCACCT CAACAGGGAAAACGACTTTCCCCTGTCCCGAGTTAGCCCGCTCATTCTCC CAACCCAGTCTGAATATTGTATTATAGGGGGTATGGTCGAATTATAAGGG ATATGGTCGAGGCCTAAATATATATATATATATATATATATATATATATA TATATTCGTTAATGTGAACACACGACCCATATTGAATGTTACATCGACAT AAAATTTGAACTGACAAGGAGCTCTGGTCCCAGCGATCGTGGGACGTCAG CTCGCACCCGAACCCACCCATCACCTCGTTGGGAGGGAGACACACAGGAG GCCCTCAACGATGACAAAACGGATACTACCTTTTCAGATGAAAACGACCA GAAACAATTTTGCAATGAGAAAAAATATGAAACACAGCGTGTGTCTGGTA ACCTGAATCCGAAAAATTCTACTGCACGTGCATACCTATCAGGTCTGAAC CGCCATCGCACCGTGTCTTTGCTTGGTTACGTGTTTCCTGTATGGATATA TAAATATGTGTTTCCGGTATTAGAAATAAGGCGTTTTATGACATTTTACT AATAGTCCCACCCTCTCAAGACAGTGGAGAGTTATTTGCAAACCGATATG GCGCCCCCTTACATGCCGCGCCGGTTTGCGCGGTCTATAATAATATAAAT TGACAAAAAGGGCAAGACATCCTTTTCGAGACATCTCAATAACAAGGAAT CTTCTGCTGGAGGGAATTGGGGGGGCGGGGGGTGGATGGAAGGGATTTCT CATCACCCGAATAGAGTGTACCATGTACATGCGCAACCTTTTTCTTCCTC GTGCTTGTTCTTACACTGAGCGACGACGGTGTCACTACCACTCTCCCCTA TTTACCGTACCGCGCTGCACTTGGACCGGCCAGAGCGGGCGAGATGCAAC TCGAAGCGGTGGCTCTGCCCCATCGCAAGCAGGAGCCATACCGCTACACA GACCTGGAGTCCCTTTACCGAACATATTTCGCTACGGCGCCAGCTGTGGG CGCAAGTCCGGAAGCCGCCAAGAGGGCGGCGATCGAGCCCTACCTCTTGG AGACCAGCAGGGGTCAGCAGATGGTCTTCGTGAACGGCGTTTTTGATTCC GCGCTTAGTGACGTGTCAGCTTTGGGTAGCGTCGAGGGACTCGTCGCCGG GCACTTGTGGGAGATGGAGGGCGCACGGCTCGATCAGGCGAGGATGTGTA ACGCGCCCCTTTTTCAGTGCGTAAAAAAAAATGCGGACGGACGTAATGCA CGAGAGTATTTATCGAACTACCAGAACCGCGTCGGGCTCGAAGCTGCTAG CCATATTTATTTGTTGCCCGCGTTTTCCTATCCGGGTGCCCCCTCAACGC GCGGTCTAGGCCAAGGACATTCTCTCGTTCTTGCCTGAGACGGATGCAGA TCACCGGACAACTCAAGGGTCGCTTCCGTTCTGCAGCCTCAACCAGGCCT GCTTCGCGGACGCCGCGGTAATTGTGGTCGAGGATGGAGTGCGAGTCGAG AAGCCCATTCAGGTGTGGCGGCCAGGAGAGATGAAGCGTTATCAAGTGAA CCTCGCCTTTGTCCCGGCTCTTCATTTTTTTGCGGCGTTTTTCTCTAGCG ATTCTTTCGTAGGCCTGGATTTCTTCGTACTCACACTCGACGGGGGAGGG GAGGGAAGGGGAGGGGACGTGAAAGGACGTCGGCAGAACCGTGGGGTCTC GGGGGAATCTTGATGTTCTCCTGGCGTTGCAAGCGTTTCACCGAACGGAA ACATCTTGTTCGTACGTCCTGGTTCTGTCCGCGAAGGTGATTTTCTTCTC TGATGGGTTAGAGGTGCCCACTGTAAACCATCCCCGCATGGTGGTGACGA TGGGCAACGACGCACAGCTTAGCCTGATGCAGAACCACATCGGTATCGGC CGCGGCGGCGTTTGCCTGGCAAATGGCTTTACGCGCATCCTCGTTGGTGA CCGCGCTAACTTGGTGAGTAATCTCTGGTATCGCTGGTTCTGCGTACAAT TCTAAATGTGGGAGATTTGCGAGTGGTGGTGGTAAAGACGCGGTTGCACC GTGAGCGCGGGGATCGTGACGCCGCCGGGGTGAAAAAGATATCGACGCCG CACCCCTGCCTTTGCCATGTGGCAGGTGCATGACTATTTGGAGGAGATGG GAGAGGCCGACCGTATGGTGGACACGATTTCCGTAGACCAGAGTGTCAAC TCGACGTACTCCATCAACCAAGTTATGTCGGGAAGCTTCGATTCCCGGTC GAACGTCCAGGTGAGGAGAGAAAACCGGGTTTTGGATGGGGAAATCTTGA GGTGTTAATGGATGTTATGGGTGCATTGTTTTTGTGACTTGTTTGACGTA AAGCAATTTCGGCGTAAGGGGACTGTGGCACGGAATGGACTGTTTAATGC CTCGCCGACTTTTTGTCCCTCGATACTCGATTTCGGCTCTGAACTCCAGA TCGACCTCTTGGAATCGGGCGCGCACTGCAACGTCCACACGGCGGCCCTC GCCACGAAAAACCAACGACAAGATACTCACACCACGATCCAGCACAAGGC TCGCGGCACCACCTGCCTTCAGGAGCAGCGTAACATCGTGGGTGACAAGG CCGACTGCGTGTTTAAGGGTCGTATCGTAATTGACGTGAGTGAATGGGAC AGCTCGATTGCTCGGCTTGTTTTCTTGGAGGGCTCGTAGGTACTCCGAGC CCCCCTTGACACAAAGATGTCGTATCTCCCTTACCACTCCTTCTTCTACT TGATACCTTGCTAGTCGCGAAACACGGGTATGGCTTGCTGCCGACTTGTT GTACATGCCGCCCGGGATATACAATCACTCATGATGGATGACGCGCGGAA GCGCATGCTTTTGAACGTGCCGCCTATCACGGAGCTAAACATGTACTCAC GGCACGGGCGTAACCTTATCATGTCTCTTGCTCGTCTGAAACTGGATGGA AACGAAACGGATATCCTCGGGAAAAATGCCAGCAAATCGCACAGAAAACG GACGCGCAGCAGCTTTCCCGCACTCTTCTGGTGAGCGACAAGGCGCGCGT GACGGTCATGCCCTCGATGGAGATCATCGCTAACGACGTGAAATGCACGC ACGGGGCCACCGTCGCCGACCTGGAGGAGGAAGAACTGTTCTACCTAATG ACCCGCGGAATCAGCAAGATTCAGGTAGGCGTTCCTGTCTTGTCCTAAAA ATAATAAATACTTGGTATAGGGGGCTGTTTTTCTTCATTAAAGTATAAGT GAAAACCCCGATCAGGCGTTACATTTTTGTTTGGGCGCGAAAAAAAACTG GTAAATGTGAAATATTATAGTAACCCTTTGGTGGCGGACTAAGAGTTTCT GGAGCAGCGCGTTTTTACCGATCGAGCTGGCGACATCTCGAGCACTGGGA AAATAATAATGAGGGGGGGGGGGGGGGGGATGGTTAGTAATCCAAGAAGA AACGAATGTTTTAAATGCATGGCGGTGAATTTCTTCGCCGCCGGCCAGGC CACGTGATGCCGAAGCGTTTCGGCTGGCTTTCTTGGCTTCGACGTTCCGT GCTCTCTTTTGGGTCTGGCGTTTAATTTTCTCAGAGTGGCATTGAGCACC AGCACCGCTCTCGCGGCTTGATCCACGGGTAACCCGGCCCCAGCGACCCT GCATTTCATGCCTGACTCCGCTCGACTCACTGTTGCAGAGGCAGAGAAAC TCTCACCGTTCACAATTTTTCAAGATCAGATCTTGAACCCCTCGAACGCA TCTTTGTCACAACCTTGGGGGCTTGACTGCTTTCTTCTCCGTATCCTTGT CATGCGTCGAACTAATCAAACCCAGGCGAAAACGCTCATGATCAAGAGCT TCGCAGACGTCGTAGTGCAACGCTTTATGGACAAGAACTTGCGAGAGCGG ATAACGCCCAAGCTGTTGGCGGCAGCCCCTCGCGAAGATAGAGCGGTGAA GGGAGAGTTCCGATCGATCTAGAACCTCATCACGTGCTAGGCAAGACTTC CTTCCCCCCCCTATAAATATGTTGACTAGAATGGTGCGGTTGGAGGATGG TCTGTTGCCAGTGCCCTTACGCGTCCTTTGGCGAGCGTGAGTAGCCCTCT GAAGTGCGTGATATTTTGAGCTAGTTCTACGGATTTGAAGCGTACACGCA ACGTCACGACGGGAATCGGAAGTCGGTCGCCCTGATTCTCACGGTGGAAG AAGTTTATGTTCTTGACCGCACGATTTCAGGGTCACGTACAATCACATCG TCTTAGATATTTCGAGAGAGTCTTGGTAAGACCTCTCAGATGTCAAGTGC CCCCGAGAGTCCGCACTCCTGCAGGAGAACAAGCCTTGTGTGTCGAGCGC GTGGACGACCGAGATAACTGCCCCGGAAGAAAGTGTGGATGCTCAACGGC AGCATGTATGCGGCGGATGAGGCGCCAATGAAAAGGGAATATCCTTGTAC ACGCCTAGACATTATAGATTAATTGTACTTCAGAGAAGCGAAACTCGTAA GGCGGTCGAGAAACTTCGTCCTTACGTCACCTTTATCGTCGGGGTTATAG AGCTACGCTACTCGGCGATAGTGGCTGGCGGGGCGCGGGAAGCGAACACG ACTCGCACGCACTCACAATCAGTGGAATTTGATAACGGTGACTGTATCCA TCGTATCACGACCGGATGAAGCGGCCTTGCTGCGTGCGGGCTTACGAGTG ATGGAAATTATCCATACATACACTCTTGCTTCCGCTCGGTCGTTGAAAAG GTACACCCCGACCTCACCCATAGTCAAGCCGTTCTCACTGTAAAGCGGGA GACCCTACGCTTACAACAACCCGGATGCCCATATAAAGGAAGAACTTTGC AGAACGATTCATGATGCTCATCGGTAACTATTACAGTATAATAATATTAC ACTAGACTATGGTAACGATTATATCCCGCCGGGAGATCTAAATAGATGAT GCTTGGAGTCGGGTGCGATGTCCATTTCCCTAGCGTGTCGCTGCTTGACG TGTACAAATCAGTAGACGCTTTTTTTGTATCTTTTCCATGGCCACCGGAT AGTAATGGGCCTAAAAAATAGCATCCGGACAAACGTGATGGTCTCTCGAG CTCCACGAGTAGTAGCTATTAATAGTGCTAGTAGTTGTATTTGTCCCGCC GTCAG
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Coding sequence (CDS) from alignment at H-elongata_contig1660:2153..8057+

>mRNA_H-elongata_contig1660.4154.1 ID=mRNA_H-elongata_contig1660.4154.1|Name=mRNA_H-elongata_contig1660.4154.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2958bp|location=Sequence derived from alignment at H-elongata_contig1660:2153..8057+ (Himanthalia elongata Himel1 dioecious)
ATGGGGATGTCTGGATCTATCGAGGATAAGACGGTGGAGAGCGTGATGCA
GTCGACAATGGAGGGTGTGAATAATAACGACGTGAAGCCTTTCGTAGTGA
CGCCGAGACGAGACCCTAGGGTTTGGTTCGACTCGATCAGAACTGGGGCG
GTGCCGCGGCCTGAAGCACTCGTGGACATTTCCAAATGGGGATGTCTGGA
TCTATCGAGGATAAGACGGTGGAGAGCGTGATGCAGTCGACAATGGAGGG
TGTGAATAATAACGACGTGAAGCCTTTCGTAGTGACGCCGAGACGAGACC
CTAGGGTTTGGTTCGACTCGATCAGAACTGGGGCGGTGCCGCGGCCTGAA
GCACTCGTGGACATTTCCAAAGCGGGCGAGATGCAACTCGAAGCGGTGGC
TCTGCCCCATCGCAAGCAGGAGCCATACCGCTACACAGACCTGGAGTCCC
TTTACCGAACATATTTCGCTACGGCGCCAGCTGTGGGCGCAAGTCCGGAA
GCCGCCAAGAGGGCGGCGATCGAGCCCTACCTCTTGGAGACCAGCAGGGG
TCAGCAGATGGTCTTCGTGAACGGCGTTTTTGATTCCGCGCTTAGTGACG
TGTCAGCTTTGGGTAGCGTCGAGGGACTCGTCGCCGGGCACTTGTGGGAG
ATGGAGGGCGCACGGCTCGATCAGAGCGGGCGAGATGCAACTCGAAGCGG
TGGCTCTGCCCCATCGCAAGCAGGAGCCATACCGCTACACAGACCTGGAG
TCCCTTTACCGAACATATTTCGCTACGGCGCCAGCTGTGGGCGCAAGTCC
GGAAGCCGCCAAGAGGGCGGCGATCGAGCCCTACCTCTTGGAGACCAGCA
GGGGTCAGCAGATGGTCTTCGTGAACGGCGTTTTTGATTCCGCGCTTAGT
GACGTGTCAGCTTTGGGTAGCGTCGAGGGACTCGTCGCCGGGCACTTGTG
GGAGATGGAGGGCGCACGGCTCGATCAGGCCAAGGACATTCTCTCGTTCT
TGCCTGAGACGGATGCAGATCACCGGACAACTCAAGGGTCGCTTCCGTTC
TGCAGCCTCAACCAGGCCTGCTTCGCGGACGCCGCGGTAATTGTGGTCGA
GGATGGAGTGCGAGTCGAGAAGCCCATTCAGGCCAAGGACATTCTCTCGT
TCTTGCCTGAGACGGATGCAGATCACCGGACAACTCAAGGGTCGCTTCCG
TTCTGCAGCCTCAACCAGGCCTGCTTCGCGGACGCCGCGGTAATTGTGGT
CGAGGATGGAGTGCGAGTCGAGAAGCCCATTCAGGTGATTTTCTTCTCTG
ATGGGTTAGAGGTGCCCACTGTAAACCATCCCCGCATGGTGGTGACGATG
GGCAACGACGCACAGCTTAGCCTGATGCAGAACCACATCGGTATCGGCCG
CGGCGGCGTTTGCCTGGCAAATGGCTTTACGCGCATCCTCGTTGGTGACC
GCGCTAACTTGGTGATTTTCTTCTCTGATGGGTTAGAGGTGCCCACTGTA
AACCATCCCCGCATGGTGGTGACGATGGGCAACGACGCACAGCTTAGCCT
GATGCAGAACCACATCGGTATCGGCCGCGGCGGCGTTTGCCTGGCAAATG
GCTTTACGCGCATCCTCGTTGGTGACCGCGCTAACTTGGTGCATGACTAT
TTGGAGGAGATGGGAGAGGCCGACCGTATGGTGGACACGATTTCCGTAGA
CCAGAGTGTCAACTCGACGTACTCCATCAACCAAGTTATGTCGGGAAGCT
TCGATTCCCGGTCGAACGTCCAGGTGCATGACTATTTGGAGGAGATGGGA
GAGGCCGACCGTATGGTGGACACGATTTCCGTAGACCAGAGTGTCAACTC
GACGTACTCCATCAACCAAGTTATGTCGGGAAGCTTCGATTCCCGGTCGA
ACGTCCAGATCGACCTCTTGGAATCGGGCGCGCACTGCAACGTCCACACG
GCGGCCCTCGCCACGAAAAACCAACGACAAGATACTCACACCACGATCCA
GCACAAGGCTCGCGGCACCACCTGCCTTCAGGAGCAGCGTAACATCGTGG
GTGACAAGGCCGACTGCGTGTTTAAGGGTCGTATCGTAATTGACATCGAC
CTCTTGGAATCGGGCGCGCACTGCAACGTCCACACGGCGGCCCTCGCCAC
GAAAAACCAACGACAAGATACTCACACCACGATCCAGCACAAGGCTCGCG
GCACCACCTGCCTTCAGGAGCAGCGTAACATCGTGGGTGACAAGGCCGAC
TGCGTGTTTAAGGGTCGTATCGTAATTGACCAAATCGCACAGAAAACGGA
CGCGCAGCAGCTTTCCCGCACTCTTCTGGTGAGCGACAAGGCGCGCGTGA
CGGTCATGCCCTCGATGGAGATCATCGCTAACGACGTGAAATGCACGCAC
GGGGCCACCGTCGCCGACCTGGAGGAGGAAGAACTGTTCTACCTAATGAC
CCGCGGAATCAGCAAGATTCAGCAAATCGCACAGAAAACGGACGCGCAGC
AGCTTTCCCGCACTCTTCTGGTGAGCGACAAGGCGCGCGTGACGGTCATG
CCCTCGATGGAGATCATCGCTAACGACGTGAAATGCACGCACGGGGCCAC
CGTCGCCGACCTGGAGGAGGAAGAACTGTTCTACCTAATGACCCGCGGAA
TCAGCAAGATTCAGGCGAAAACGCTCATGATCAAGAGCTTCGCAGACGTC
GTAGTGCAACGCTTTATGGACAAGAACTTGCGAGAGCGGATAACGCCCAA
GCTGTTGGCGGCAGCCCCTCGCGAAGATAGAGCGGTGAAGGGAGAGTTCC
GATCGATCTAGGCGAAAACGCTCATGATCAAGAGCTTCGCAGACGTCGTA
GTGCAACGCTTTATGGACAAGAACTTGCGAGAGCGGATAACGCCCAAGCT
GTTGGCGGCAGCCCCTCGCGAAGATAGAGCGGTGAAGGGAGAGTTCCGAT
CGATCTAG
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