prot_H-elongata_contig16568.4140.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig16568.4140.1
Unique Nameprot_H-elongata_contig16568.4140.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length286
Homology
BLAST of mRNA_H-elongata_contig16568.4140.1 vs. uniprot
Match: D7G2G9_ECTSI (Similar to Chalcone Isomerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2G9_ECTSI)

HSP 1 Score: 254 bits (649), Expect = 1.480e-81
Identity = 131/202 (64.85%), Postives = 164/202 (81.19%), Query Frame = 0
Query:   87 PLSKEVVDVATGLALPRTKRF--SRSDLTCLGAGVRAKSIAVAKINVYTVGLYVDPKGARGALRKYTGLDPARLRKDASVFKVLGAAG-FSKYLHLVFARSVGAKKVVEALTSVKGVNKDVLDRFSAIMLDAVGGSIGKGETVSLGWEGKDKMVVLVRDRPAGTVIDAALPRAVFDLYLGDTPVSLAAKSAFAEGLAAFLSS 285
            PLS +V D ATGL LPRTK+F  S++ L CLG GVR KS+A   +NVYTVGLYV+PKGAR AL+ Y G DP  L KD SV++VLG AG FSKYLHLVFARSVGA+KVV+A T+VKGVN+DVLD+FS++ ++ VG SI + E+V+LGWEGKD++VVLVRD+  G+VID +LP +VF+L+LG  PVS  AK+AFAEG+ AFL+S
Sbjct:   28 PLSPDVRDPATGLVLPRTKQFASSKTGLVCLGVGVRVKSVAFVNVNVYTVGLYVEPKGARKALKSYAGRDPEELSKDKSVYRVLGGAGDFSKYLHLVFARSVGAQKVVDAFTAVKGVNQDVLDKFSSLTMEGVGKSINREESVTLGWEGKDRLVVLVRDKEIGSVIDESLPASVFNLFLGSDPVSPVAKTAFAEGVPAFLAS 229          
BLAST of mRNA_H-elongata_contig16568.4140.1 vs. uniprot
Match: A0A6H5KHX0_9PHAE (FAPb protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHX0_9PHAE)

HSP 1 Score: 252 bits (643), Expect = 5.110e-79
Identity = 130/202 (64.36%), Postives = 162/202 (80.20%), Query Frame = 0
Query:   87 PLSKEVVDVATGLALPRTKRF--SRSDLTCLGAGVRAKSIAVAKINVYTVGLYVDPKGARGALRKYTGLDPARLRKDASVFKVLGAAG-FSKYLHLVFARSVGAKKVVEALTSVKGVNKDVLDRFSAIMLDAVGGSIGKGETVSLGWEGKDKMVVLVRDRPAGTVIDAALPRAVFDLYLGDTPVSLAAKSAFAEGLAAFLSS 285
            PLS +V D ATGL LPRTK+F  S++ L CLG GVR KS+A   +NVYTVGLYV+PKGAR AL+ Y G DP  L KD SV++VLG AG FSKYLHLVFARSVGA+KVV+A T+VKGVN+DVLD+FS++ ++ VG SI + E+V+LGWEGKD++VVLVRD+  G++ID ALP +VF L+LG  PVS  AK+AFAEG+  FL+S
Sbjct:  146 PLSPDVRDPATGLVLPRTKQFASSKTGLVCLGVGVRVKSVAFVTVNVYTVGLYVEPKGARKALKSYAGRDPEELSKDKSVYRVLGGAGDFSKYLHLVFARSVGAQKVVDAFTAVKGVNQDVLDKFSSLTMEGVGKSIDREESVTLGWEGKDRLVVLVRDKEIGSIIDEALPASVFSLFLGSDPVSPVAKTAFAEGVPPFLAS 347          
BLAST of mRNA_H-elongata_contig16568.4140.1 vs. uniprot
Match: A0A6S9GES1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9GES1_HETAK)

HSP 1 Score: 164 bits (414), Expect = 1.050e-44
Identity = 94/199 (47.24%), Postives = 125/199 (62.81%), Query Frame = 0
Query:   81 APSSSSPLSKEVVDVATGLALPRTKRFSRSDLTCLGAGVRAKSIAVAKINVYTVGLYVDPKGARGALRKYTGLDPARLRKDASVFKVLGAAGFSKYLHLVFARSVGAKKVVEALTSVKGVNKDVLDRFSAIMLDAVGGSIGKGETVSLGWEGKDKMVVLVRDRPAGTVIDAALPRAVFDLYLGDTPVSLAAKSAFAEGL 279
            AP + +P +  + D ATG+A    K F  + L  +GAGVRAK++ VA +NVY+V LYVD   A  AL  Y G           VF VL A  F+K ++L FAR VG++K+++ALT+V+GV    LD FSA++L A+GG IG  ET++LG++    M V VR+  AGTV DA L  AVF LYLG +PVS  AK AF  G+
Sbjct:  154 APGTLAPGATSLTDDATGIAFDGVKAFGGAKLAAVGAGVRAKNLGVAMVNVYSVCLYVDKPKAAKALATYKG------NPGPGVFDVLMAKNFNKVMYLKFARGVGSQKIIDALTAVEGVPAATLDEFSALLLGAMGGQIGASETIALGFDASGSMSVYVREALAGTVADATLAPAVFKLYLGASPVSQPAKDAFGAGV 346          
BLAST of mRNA_H-elongata_contig16568.4140.1 vs. uniprot
Match: A0A0G4GUV1_VITBC (Chalcone_isomerase domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4GUV1_VITBC)

HSP 1 Score: 159 bits (402), Expect = 1.350e-44
Identity = 86/199 (43.22%), Postives = 125/199 (62.81%), Query Frame = 0
Query:   87 PLSKEVVDVATGLALPRTKRFSRSD-LTCLGAGVRAKSIAVAKINVYTVGLYVDPKGARGALRKYTGLDPARLRKDASVFKVLGAAGFSKYLHLVFARSVGAKKVVEALTSVKGVNKDVLDRFSAIMLDAVGGSIGKGETVSLGWEGKDKMVVLVRDRPAGTVIDAALPRAVFDLYLGDTPVSLAAKSAFAEGLAAFLS 284
            P++  + D  TG+  P    F  +  +T LGAG R K++ +AK+NVY+VGLYV+PK A  AL  + G     L  D   +  L      K + L FAR+VGA KV +AL++VKGV  +V+  F +++   +G SI K ET+++GW    ++ VL+R +PAGTV+DA LP+A F+LYLG TPVS+ AK AF + +A+  S
Sbjct:    4 PVAAVLKDKVTGIEFPCEATFPGTPKMTLLGAGPRRKNLGIAKVNVYSVGLYVEPKEAAKALSSFKGESEESLMNDDRFYDTLLGKEVPKLVLLKFARTVGAHKVADALSAVKGVEPEVVSEFCSLLEKGMGASIKKAETIAMGWTEDQRLDVLIRGQPAGTVVDAKLPKAFFELYLGKTPVSMEAKHAFVKRVASLFS 202          
BLAST of mRNA_H-elongata_contig16568.4140.1 vs. uniprot
Match: A0A0G4GWT2_9ALVE (Chalcone_isomerase domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4GWT2_9ALVE)

HSP 1 Score: 157 bits (398), Expect = 9.870e-44
Identity = 92/193 (47.67%), Postives = 121/193 (62.69%), Query Frame = 0
Query:   87 PLSKEVVDVATGLALPRTKRFSRSD-LTCLGAGVRAKSI-AVAKINVYTVGLYVDPKGARGALRKYTGLDPARLRKDASVFKVLGAAGFSKYLHLVFARSVGAKKVVEALTSVKGVNKDVLDRFSAIMLDAVGGSIGKGETVSLGWEGKDKMVVLVRDRPAGTVIDAALPRAVFDLYLGDTPVSLAAKSAFAE 277
            PL+  + D ATGL       F  S  +T LGAGVRAK++     +NVY+VGLYV+P  AR  L  +  ++ A L K    +K L      K +HL FARSVGA K+VEALTS+ GV ++ L +FS ++LD++G SIG  ETV+L     D + V+VR + AG+V D+ LP+A FDLYLG  PVS  AK AFA 
Sbjct:   31 PLAAILTDAATGLDFETDVSFPSSPKMTLLGAGVRAKALLGPIAVNVYSVGLYVEPSKARQTLSGFKTIEEAELAKKEDFYKALMKEDLPKAMHLKFARSVGASKIVEALTSLNGVPEESLSKFSKLLLDSIGSSIGYKETVTLSSSKPDTLDVIVRGKHAGSVRDSKLPKAFFDLYLGKNPVSSEAKKAFAS 223          
BLAST of mRNA_H-elongata_contig16568.4140.1 vs. uniprot
Match: A0A7S2UYK7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UYK7_9STRA)

HSP 1 Score: 141 bits (356), Expect = 8.970e-38
Identity = 81/181 (44.75%), Postives = 110/181 (60.77%), Query Frame = 0
Query:   84 SSSPLSKEVVDVATGLALPRTKRFSRSD----LTCLGAGVRAKS-IAVAKINVYTVGLYVDPKGARGALRKYTGLDPARLRKDASVFKVLGAAGFSKYLHLVFARSVGAKKVVEALTSVKGVNKDVLDRFSAIMLDAVGGSIGKGETVSLGWEGKDKMVVLVRDRPAGTVIDAALPRAVFD 259
            SSS  + +V +  TG+  P TK FS +     LT  G GVR K+ +   K+NVY +GLYVDP  A  A  KY G D   + KD   FK+L + GF+K +++ +AR+VG  KVV+AL  V   +   LD F  +++   G +IG  ET++LGWEGKDK+VV VRD+  GTV  A L  AVF+
Sbjct:   23 SSSSAADKVTEPVTGIDFPVTKSFSLNSTSPTLTLTGVGVRVKALVGPLKVNVYGMGLYVDPSRAARAFSKYKGKDAKEVAKDDDFFKILHSPGFAKAIYIDYARAVGVDKVVDALRLVPTEDTAALDYFCDLLVIGTGSTIGNRETMTLGWEGKDKLVVQVRDKTVGTVTSAKLVEAVFE 203          
BLAST of mRNA_H-elongata_contig16568.4140.1 vs. uniprot
Match: A0A4D9CUC0_9STRA (Chalcone_isomerase domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CUC0_9STRA)

HSP 1 Score: 129 bits (324), Expect = 1.200e-32
Identity = 75/193 (38.86%), Postives = 111/193 (57.51%), Query Frame = 0
Query:   90 KEVVDVATGLALPRTKRFSRS----DLTCLGAGVRAKSIAVAKINVYTVGLYVDPKGARGALRKYTGLDPARLRKDASVFKVL--GAAGFSKYLHLVFARSVGAKKVVEALTSVKGVNKDVLDRFSAIMLDAVGGSIGKGETVSLGWEGKDKMVVLVRDRPAGTVIDAALPRAVFDLYLGDTPVSLAAKSAFA 276
            KEVVD  TGL  P  +         +L+ LG G R K++ V ++NVY VGLY++       L+ + G     L K+A  +  L    +G ++ L+L FAR+V A K+VEAL +V GV K+V+  F   +L A+G S+ + ET++L W   D++ + VRD+P  T     L R +F+LYLG+ P+S  AK  FA
Sbjct:   36 KEVVDKVTGLVFPMHRILPHGGRGRELSLLGVGPRRKNLFVVEVNVYAVGLYLETSQL-SRLKAFRGKSSEALAKEAKYYATLMKEGSGLNRALYLTFARTVPAGKIVEALAAVDGVKKEVMADFKKSLLTAIGSSLKEKETLTLAWTPDDRLSLFVRDKPVKTFPSLELARGIFNLYLGEKPISPEAKKGFA 227          
BLAST of mRNA_H-elongata_contig16568.4140.1 vs. uniprot
Match: W7TMS0_9STRA (Chalcone isomerase-like protein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TMS0_9STRA)

HSP 1 Score: 134 bits (336), Expect = 7.190e-32
Identity = 77/193 (39.90%), Postives = 113/193 (58.55%), Query Frame = 0
Query:   90 KEVVDVATGLALPRTKRFSRS----DLTCLGAGVRAKSIAVAKINVYTVGLYVDPKGARGALRKYTGLDPARLRKDASVFKVL--GAAGFSKYLHLVFARSVGAKKVVEALTSVKGVNKDVLDRFSAIMLDAVGGSIGKGETVSLGWEGKDKMVVLVRDRPAGTVIDAALPRAVFDLYLGDTPVSLAAKSAFA 276
            KEVVD  TGL  P  +         +LT LG G R K++ V ++NVY VGLY++     G L+ + G     L K+A  +  L    +G ++ L+L+FAR+V A K+VEAL +V GV K+V+  F   +L A+G S+ + ET++L W   D++ + VRD+P  T     L R +F+LYLG+ P+S  AK  FA
Sbjct:  400 KEVVDKVTGLVFPMHRILPHGGRGRELTLLGVGPRRKNLFVVEVNVYAVGLYLETS-LLGRLKAFRGKSSEALAKEAKYYATLMKEGSGLNRALYLIFARTVPAGKIVEALAAVDGVKKEVMADFKKSLLAAIGSSLKEKETLTLAWTPDDRLSLFVRDKPVKTFPSLELARGIFNLYLGEKPISPEAKKGFA 591          
BLAST of mRNA_H-elongata_contig16568.4140.1 vs. uniprot
Match: A0A835Z7E7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7E7_9STRA)

HSP 1 Score: 129 bits (324), Expect = 1.930e-31
Identity = 78/198 (39.39%), Postives = 118/198 (59.60%), Query Frame = 0
Query:   87 PLSKEVVDVATGLALPRTKRFSRSD-LTCLGAGVRAKSIAV-AKINVYTVGLYVDPKGARGALRKYTGLDPARLRKDASVFKVLGAAG-FSKYLHLVFARSVGAKKVVEALTSVKGVNKDVLDRFSAIMLDAVGGSIGK-GETVSLGWEGKDKMVVLVRDRPAGTVIDAALPRAVFDLYLGDTPVSLAAKSAFAEGLA 280
            P   ++V+ ATG+ L  T  F+ S  LTC+G GVR   +   + ++VY +GLY+D  GAR AL+ +  L    L +    +  L   G F++Y+ L F R V   KV +ALT+V+GV   ++D +  ++  A+G    + G+T++LG+EGKD++VV+   +  G V    LP AVF LYLGD P+  AAK A A+G+A
Sbjct:  149 PRKTDLVEPATGIVLWPTDSFNGSPPLTCVGLGVRTVPVLYFSSVHVYVMGLYIDAVGARKALKAFLPLPAEDLAQKPEFYSALLKPGVFTRYIVLAFNRKVSTLKVADALTAVEGVPPPIVDAYRRLLEGALGEKGARPGDTLALGFEGKDRLVVVANGKTHGAVRSTVLPAAVFKLYLGDDPIIPAAKRAVADGVA 346          
BLAST of mRNA_H-elongata_contig16568.4140.1 vs. uniprot
Match: A0A7S1JL13_9ALVE (Hypothetical protein n=1 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A7S1JL13_9ALVE)

HSP 1 Score: 119 bits (299), Expect = 6.250e-30
Identity = 64/147 (43.54%), Postives = 92/147 (62.59%), Query Frame = 0
Query:  138 VDPKGARGALRKYTGLDPARLRKDASVFKVLGAAGFSKYLHLVFARSVGAKKVVEALTSVKGVNKDVLDRFSAIMLDAVGGSIGKGETVSLGWEGKDKMVVLVRDRPAGTVIDAALPRAVFDLYLGDTPVSLAAKSAFAEGLAAFLS 284
            V+PK A  AL  + G     L  D   +  L      K + L FAR+VGA KV +AL++VKGV  +V+  F +++   +G SI K ET+++GW    ++ VL+R +PAGTV+DA LP+A F+LYLG TPVS+ AK AF + +A+  S
Sbjct:    1 VEPKEASKALSSFKGESEESLMNDDRFYDTLLGKEVPKLVLLKFARTVGAHKVADALSAVKGVEPEVVSEFCSLLEKGMGASIKKAETIAMGWTEDQRLDVLIRGQPAGTVVDAKLPKAFFELYLGKTPVSMEAKHAFVKRVASLFS 147          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig16568.4140.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G2G9_ECTSI1.480e-8164.85Similar to Chalcone Isomerase n=1 Tax=Ectocarpus s... [more]
A0A6H5KHX0_9PHAE5.110e-7964.36FAPb protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A6S9GES1_HETAK1.050e-4447.24Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A0G4GUV1_VITBC1.350e-4443.22Chalcone_isomerase domain-containing protein n=2 T... [more]
A0A0G4GWT2_9ALVE9.870e-4447.67Chalcone_isomerase domain-containing protein n=1 T... [more]
A0A7S2UYK7_9STRA8.970e-3844.75Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A4D9CUC0_9STRA1.200e-3238.86Chalcone_isomerase domain-containing protein n=1 T... [more]
W7TMS0_9STRA7.190e-3239.90Chalcone isomerase-like protein n=2 Tax=Nannochlor... [more]
A0A835Z7E7_9STRA1.930e-3139.39Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S1JL13_9ALVE6.250e-3043.54Hypothetical protein n=1 Tax=Vitrella brassicaform... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016089Chalcone isomerase, orthogonal bundle domain superfamilyGENE3D1.10.890.20coord: 142..280
e-value: 1.9E-31
score: 111.1
IPR016088Chalcone isomerase, 3-layer sandwichGENE3D3.50.70.10coord: 94..261
e-value: 1.9E-31
score: 111.1
IPR016087Chalcone isomerasePFAMPF16036Chalcone_3coord: 97..271
e-value: 2.1E-10
score: 40.9
NoneNo IPR availablePANTHERPTHR47698FAMILY NOT NAMEDcoord: 72..283
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 21..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 9..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..285
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..8
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..24
score: 0.679
NoneNo IPR availableTMHMMTMhelixcoord: 7..25
IPR036298Chalcone isomerase superfamilySUPERFAMILY54626Chalcone isomerasecoord: 101..284

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig16568contigH-elongata_contig16568:2607..3882 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig16568.4140.1mRNA_H-elongata_contig16568.4140.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig16568 1361..4105 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig16568.4140.1 ID=prot_H-elongata_contig16568.4140.1|Name=mRNA_H-elongata_contig16568.4140.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=286bp
MPSRQAGSLAVAAAFALLAVFIFCAQEKHRAWCTKSLSMPRFADDGTSGP
MAHSGVARTSGVWSGDAKQGRGKRKGEGGAAPSSSSPLSKEVVDVATGLA
LPRTKRFSRSDLTCLGAGVRAKSIAVAKINVYTVGLYVDPKGARGALRKY
TGLDPARLRKDASVFKVLGAAGFSKYLHLVFARSVGAKKVVEALTSVKGV
NKDVLDRFSAIMLDAVGGSIGKGETVSLGWEGKDKMVVLVRDRPAGTVID
AALPRAVFDLYLGDTPVSLAAKSAFAEGLAAFLSS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016089Chalcone_isomerase_bundle_sf
IPR016088Chalcone_isomerase_3-sand
IPR016087Chalcone_isomerase
IPR036298Chalcone_isomerase_sf