prot_H-elongata_contig165664.4136.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig165664.4136.1
Unique Nameprot_H-elongata_contig165664.4136.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length60
Homology
BLAST of mRNA_H-elongata_contig165664.4136.1 vs. uniprot
Match: A0A6H5JD57_9PHAE (Coproporphyrinogen oxidase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JD57_9PHAE)

HSP 1 Score: 121 bits (303), Expect = 1.380e-31
Identity = 58/60 (96.67%), Postives = 60/60 (100.00%), Query Frame = 0
Query:    1 MSGGKVFEKAGVNLSVVYGTMPQEALRAATERGVDRAKGMAEGERVPFFACGLSSVMHPK 60
            ++GGKVFEKAGVNLSVVYGTMPQEALRAATERGVDRAKGMAEGERVPFFACGLSSVMHPK
Sbjct:  125 LAGGKVFEKAGVNLSVVYGTMPQEALRAATERGVDRAKGMAEGERVPFFACGLSSVMHPK 184          
BLAST of mRNA_H-elongata_contig165664.4136.1 vs. uniprot
Match: B7G7A5_PHATC (Coproporphyrinogen oxidase n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G7A5_PHATC)

HSP 1 Score: 117 bits (292), Expect = 1.460e-30
Identity = 56/60 (93.33%), Postives = 59/60 (98.33%), Query Frame = 0
Query:    1 MSGGKVFEKAGVNLSVVYGTMPQEALRAATERGVDRAKGMAEGERVPFFACGLSSVMHPK 60
            +SGGKVFEKAGVNLSVVYG+MPQEAL+AATERGVDRAKGMA GERVPFFACGLSSVMHPK
Sbjct:   47 LSGGKVFEKAGVNLSVVYGSMPQEALQAATERGVDRAKGMAPGERVPFFACGLSSVMHPK 106          
BLAST of mRNA_H-elongata_contig165664.4136.1 vs. uniprot
Match: A0A7R9Z8W0_9STRA (Coproporphyrinogen oxidase (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9Z8W0_9STRA)

HSP 1 Score: 114 bits (286), Expect = 1.650e-30
Identity = 55/60 (91.67%), Postives = 58/60 (96.67%), Query Frame = 0
Query:    1 MSGGKVFEKAGVNLSVVYGTMPQEALRAATERGVDRAKGMAEGERVPFFACGLSSVMHPK 60
            +SGG VFEKAGVNLSVVYG+MPQEAL+AATERGVDRAKGMA GERVPFFACGLSSVMHPK
Sbjct:  152 LSGGDVFEKAGVNLSVVYGSMPQEALQAATERGVDRAKGMAPGERVPFFACGLSSVMHPK 211          
BLAST of mRNA_H-elongata_contig165664.4136.1 vs. uniprot
Match: A0A1E7G028_9STRA (Coproporphyrinogen oxidase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7G028_9STRA)

HSP 1 Score: 118 bits (295), Expect = 2.390e-30
Identity = 57/60 (95.00%), Postives = 59/60 (98.33%), Query Frame = 0
Query:    1 MSGGKVFEKAGVNLSVVYGTMPQEALRAATERGVDRAKGMAEGERVPFFACGLSSVMHPK 60
            MSGGKVFEKAGVNLSVVYG+MPQEAL+AATERGVDRAKGMA GERVPFFACGLSSVMHPK
Sbjct:  136 MSGGKVFEKAGVNLSVVYGSMPQEALQAATERGVDRAKGMAPGERVPFFACGLSSVMHPK 195          
BLAST of mRNA_H-elongata_contig165664.4136.1 vs. uniprot
Match: A0A6V2PQX8_9STRA (Coproporphyrinogen oxidase n=3 Tax=Lithodesmiaceae TaxID=49247 RepID=A0A6V2PQX8_9STRA)

HSP 1 Score: 117 bits (292), Expect = 8.840e-30
Identity = 56/60 (93.33%), Postives = 59/60 (98.33%), Query Frame = 0
Query:    1 MSGGKVFEKAGVNLSVVYGTMPQEALRAATERGVDRAKGMAEGERVPFFACGLSSVMHPK 60
            +SGGKVFEKAGVNLSVVYG+MPQEAL+AATERGVDRAKGMA GERVPFFACGLSSVMHPK
Sbjct:  159 LSGGKVFEKAGVNLSVVYGSMPQEALQAATERGVDRAKGMAPGERVPFFACGLSSVMHPK 218          
BLAST of mRNA_H-elongata_contig165664.4136.1 vs. uniprot
Match: A0A7S0C899_9STRA (Coproporphyrinogen oxidase n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C899_9STRA)

HSP 1 Score: 114 bits (285), Expect = 1.030e-29
Identity = 56/60 (93.33%), Postives = 57/60 (95.00%), Query Frame = 0
Query:    1 MSGGKVFEKAGVNLSVVYGTMPQEALRAATERGVDRAKGMAEGERVPFFACGLSSVMHPK 60
            MSGG VFEKAGVNLSVVYG+MPQEAL AATERGVDRAKGMA GERVPFFACGLSSVMHPK
Sbjct:   22 MSGGDVFEKAGVNLSVVYGSMPQEALIAATERGVDRAKGMAPGERVPFFACGLSSVMHPK 81          
BLAST of mRNA_H-elongata_contig165664.4136.1 vs. uniprot
Match: A0A7S3Q8F2_9STRA (Coproporphyrinogen oxidase n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q8F2_9STRA)

HSP 1 Score: 116 bits (290), Expect = 1.360e-29
Identity = 56/60 (93.33%), Postives = 58/60 (96.67%), Query Frame = 0
Query:    1 MSGGKVFEKAGVNLSVVYGTMPQEALRAATERGVDRAKGMAEGERVPFFACGLSSVMHPK 60
            +SGGKVFEKAGVNLSVVYGTMPQEAL+AATERGVDRA GMA GERVPFFACGLSSVMHPK
Sbjct:  141 LSGGKVFEKAGVNLSVVYGTMPQEALQAATERGVDRAAGMAPGERVPFFACGLSSVMHPK 200          
BLAST of mRNA_H-elongata_contig165664.4136.1 vs. uniprot
Match: A0A7S0Y8W8_9STRA (Coproporphyrinogen oxidase n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0Y8W8_9STRA)

HSP 1 Score: 115 bits (289), Expect = 1.730e-29
Identity = 56/60 (93.33%), Postives = 58/60 (96.67%), Query Frame = 0
Query:    1 MSGGKVFEKAGVNLSVVYGTMPQEALRAATERGVDRAKGMAEGERVPFFACGLSSVMHPK 60
            MSGG VFEKAGVNLSVVYG+MPQEAL+AATERGVDRAKGMA GERVPFFACGLSSVMHPK
Sbjct:  134 MSGGDVFEKAGVNLSVVYGSMPQEALQAATERGVDRAKGMAPGERVPFFACGLSSVMHPK 193          
BLAST of mRNA_H-elongata_contig165664.4136.1 vs. uniprot
Match: A0A7S2L134_9STRA (Coproporphyrinogen oxidase n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2L134_9STRA)

HSP 1 Score: 115 bits (289), Expect = 1.800e-29
Identity = 55/60 (91.67%), Postives = 59/60 (98.33%), Query Frame = 0
Query:    1 MSGGKVFEKAGVNLSVVYGTMPQEALRAATERGVDRAKGMAEGERVPFFACGLSSVMHPK 60
            +SGGKVFEKAGVNLSVVYG+MPQEAL+AATERGVDRAKGMA GERVPFFACGLSSVMHP+
Sbjct:  137 LSGGKVFEKAGVNLSVVYGSMPQEALQAATERGVDRAKGMAPGERVPFFACGLSSVMHPR 196          
BLAST of mRNA_H-elongata_contig165664.4136.1 vs. uniprot
Match: A0A7S1H0X1_9STRA (Coproporphyrinogen oxidase (Fragment) n=1 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A7S1H0X1_9STRA)

HSP 1 Score: 114 bits (284), Expect = 3.190e-29
Identity = 54/60 (90.00%), Postives = 58/60 (96.67%), Query Frame = 0
Query:    1 MSGGKVFEKAGVNLSVVYGTMPQEALRAATERGVDRAKGMAEGERVPFFACGLSSVMHPK 60
            +SGG VFEKAGVNLSVVYG+MPQEAL+AATERGVDRAKGMA GERVPFFACGLSSVMHP+
Sbjct:  129 LSGGNVFEKAGVNLSVVYGSMPQEALQAATERGVDRAKGMAPGERVPFFACGLSSVMHPR 188          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig165664.4136.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JD57_9PHAE1.380e-3196.67Coproporphyrinogen oxidase n=2 Tax=Ectocarpus TaxI... [more]
B7G7A5_PHATC1.460e-3093.33Coproporphyrinogen oxidase n=2 Tax=Phaeodactylum t... [more]
A0A7R9Z8W0_9STRA1.650e-3091.67Coproporphyrinogen oxidase (Fragment) n=1 Tax=Pseu... [more]
A0A1E7G028_9STRA2.390e-3095.00Coproporphyrinogen oxidase n=1 Tax=Fragilariopsis ... [more]
A0A6V2PQX8_9STRA8.840e-3093.33Coproporphyrinogen oxidase n=3 Tax=Lithodesmiaceae... [more]
A0A7S0C899_9STRA1.030e-2993.33Coproporphyrinogen oxidase n=1 Tax=Proboscia inerm... [more]
A0A7S3Q8F2_9STRA1.360e-2993.33Coproporphyrinogen oxidase n=1 Tax=Chaetoceros deb... [more]
A0A7S0Y8W8_9STRA1.730e-2993.33Coproporphyrinogen oxidase n=1 Tax=Pseudo-nitzschi... [more]
A0A7S2L134_9STRA1.800e-2991.67Coproporphyrinogen oxidase n=2 Tax=Leptocylindrus ... [more]
A0A7S1H0X1_9STRA3.190e-2990.00Coproporphyrinogen oxidase (Fragment) n=1 Tax=Thal... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001260Coproporphyrinogen III oxidase, aerobicPFAMPF01218Coprogen_oxidascoord: 2..60
e-value: 2.6E-12
score: 46.1
IPR001260Coproporphyrinogen III oxidase, aerobicPANTHERPTHR10755COPROPORPHYRINOGEN III OXIDASE, MITOCHONDRIALcoord: 2..60
IPR036406Oxygen-dependent coproporphyrinogen III oxidase superfamilyGENE3D3.40.1500.10coord: 1..60
e-value: 9.1E-15
score: 55.8
IPR036406Oxygen-dependent coproporphyrinogen III oxidase superfamilySUPERFAMILY102886Coproporphyrinogen III oxidasecoord: 1..59
NoneNo IPR availablePANTHERPTHR10755:SF9coord: 2..60

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig165664contigH-elongata_contig165664:22..933 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig165664.4136.1mRNA_H-elongata_contig165664.4136.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig165664 1..933 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig165664.4136.1 ID=prot_H-elongata_contig165664.4136.1|Name=mRNA_H-elongata_contig165664.4136.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=60bp
MSGGKVFEKAGVNLSVVYGTMPQEALRAATERGVDRAKGMAEGERVPFFA
CGLSSVMHPK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001260Coprogen_oxidase_aer
IPR036406Coprogen_oxidase_aer_sf