prot_H-elongata_contig16550.4125.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig16550.4125.1
Unique Nameprot_H-elongata_contig16550.4125.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length92
Homology
BLAST of mRNA_H-elongata_contig16550.4125.1 vs. uniprot
Match: A0A6H5KSL7_9PHAE (NifU domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KSL7_9PHAE)

HSP 1 Score: 173 bits (438), Expect = 3.530e-52
Identity = 87/92 (94.57%), Postives = 91/92 (98.91%), Query Frame = 0
Query:    1 SNSGNVRVVEIDGPVVRLELEGACGSCPSSTMTMKMGLERRLVQRIPEISEVVQSIPNGPELSVENVEKVLDGVRPFLSVAGGSISIQSLTG 92
            S+ GNVRVVEIDGPVVRLELEGACGSCPSSTMTMKMGLERRL+QRIPEISEVVQSIPNGPEL+VENVEKVLDGVRPFLSVAGGSI+IQSLTG
Sbjct:  140 SDGGNVRVVEIDGPVVRLELEGACGSCPSSTMTMKMGLERRLMQRIPEISEVVQSIPNGPELTVENVEKVLDGVRPFLSVAGGSINIQSLTG 231          
BLAST of mRNA_H-elongata_contig16550.4125.1 vs. uniprot
Match: A0A835Z016_9STRA (NifU-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z016_9STRA)

HSP 1 Score: 155 bits (393), Expect = 1.850e-46
Identity = 74/92 (80.43%), Postives = 87/92 (94.57%), Query Frame = 0
Query:    1 SNSGNVRVVEIDGPVVRLELEGACGSCPSSTMTMKMGLERRLVQRIPEISEVVQSIPNGPELSVENVEKVLDGVRPFLSVAGGSISIQSLTG 92
            S+ GNVRVVEIDGPVVRLEL+GACGSCPSSTMTMKMGLERRL+++IPEISEVVQS+P GP+L++E +EKVLDGVRPFLSVAGG+IS+ +L G
Sbjct:   45 SDGGNVRVVEIDGPVVRLELQGACGSCPSSTMTMKMGLERRLIEKIPEISEVVQSMPEGPQLNMEEIEKVLDGVRPFLSVAGGAISVAALEG 136          
BLAST of mRNA_H-elongata_contig16550.4125.1 vs. uniprot
Match: A0A7R9U202_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U202_9STRA)

HSP 1 Score: 144 bits (364), Expect = 2.190e-41
Identity = 69/92 (75.00%), Postives = 81/92 (88.04%), Query Frame = 0
Query:    1 SNSGNVRVVEIDGPVVRLELEGACGSCPSSTMTMKMGLERRLVQRIPEISEVVQSIPNGPELSVENVEKVLDGVRPFLSVAGGSISIQSLTG 92
            S+ GNV V EIDGP+VRLEL+GACG+CPSSTMTMKMGLERRL +RIPEISEVVQ++P+ PELS   VE VLDGVRPFL VAGGSI++Q ++G
Sbjct:  109 SDGGNVAVAEIDGPIVRLELQGACGTCPSSTMTMKMGLERRLKERIPEISEVVQAVPDAPELSEAGVESVLDGVRPFLQVAGGSITLQEISG 200          
BLAST of mRNA_H-elongata_contig16550.4125.1 vs. uniprot
Match: A0A4D9D2Y8_9STRA (NifU domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D2Y8_9STRA)

HSP 1 Score: 143 bits (360), Expect = 1.060e-40
Identity = 67/92 (72.83%), Postives = 83/92 (90.22%), Query Frame = 0
Query:    1 SNSGNVRVVEIDGPVVRLELEGACGSCPSSTMTMKMGLERRLVQRIPEISEVVQSIPNGPELSVENVEKVLDGVRPFLSVAGGSISIQSLTG 92
            S+ GNV V EIDGPVV+LEL+GACGSCPSSTMTMKMGLERRL ++IPEISEV+Q++P GP LS EN+++VL+GVRPFL VAGGSIS++ ++G
Sbjct:  112 SDGGNVVVSEIDGPVVKLELQGACGSCPSSTMTMKMGLERRLKEKIPEISEVIQAMPEGPALSTENIDQVLEGVRPFLMVAGGSISVKEISG 203          
BLAST of mRNA_H-elongata_contig16550.4125.1 vs. uniprot
Match: W7TNI1_9STRA (Nifu like protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TNI1_9STRA)

HSP 1 Score: 142 bits (357), Expect = 2.780e-40
Identity = 66/92 (71.74%), Postives = 83/92 (90.22%), Query Frame = 0
Query:    1 SNSGNVRVVEIDGPVVRLELEGACGSCPSSTMTMKMGLERRLVQRIPEISEVVQSIPNGPELSVENVEKVLDGVRPFLSVAGGSISIQSLTG 92
            S+ GNV V +IDGPVV+LEL+GACGSCPSSTMTMKMGLERRL ++IPEISEV+Q++P GP LS EN+++VL+GVRPFL VAGGSIS++ ++G
Sbjct:  109 SDGGNVVVSDIDGPVVKLELQGACGSCPSSTMTMKMGLERRLKEKIPEISEVIQAMPEGPALSTENIDQVLEGVRPFLMVAGGSISVKEISG 200          
BLAST of mRNA_H-elongata_contig16550.4125.1 vs. uniprot
Match: A0A7S1H4I0_9STRA (Hypothetical protein n=1 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A7S1H4I0_9STRA)

HSP 1 Score: 137 bits (346), Expect = 2.050e-39
Identity = 65/92 (70.65%), Postives = 78/92 (84.78%), Query Frame = 0
Query:    1 SNSGNVRVVEIDGPVVRLELEGACGSCPSSTMTMKMGLERRLVQRIPEISEVVQSIPNGPELSVENVEKVLDGVRPFLSVAGGSISIQSLTG 92
            S+ GNV + EIDGPVVRLEL+GACG+CPSST TMKMGLER+L ++IPEI EVVQS+P GPEL  E +  VLDGVRPFL VAGGSI ++S++G
Sbjct:   47 SDGGNVAISEIDGPVVRLELQGACGTCPSSTQTMKMGLERKLREKIPEIQEVVQSMPEGPELCEEEINVVLDGVRPFLQVAGGSIDVESISG 138          
BLAST of mRNA_H-elongata_contig16550.4125.1 vs. uniprot
Match: A0A7S2C848_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C848_9STRA)

HSP 1 Score: 136 bits (343), Expect = 3.220e-38
Identity = 65/92 (70.65%), Postives = 80/92 (86.96%), Query Frame = 0
Query:    1 SNSGNVRVVEIDGPVVRLELEGACGSCPSSTMTMKMGLERRLVQRIPEISEVVQSIPNGPELSVENVEKVLDGVRPFLSVAGGSISIQSLTG 92
            S+ GNV + EIDGPVV+LEL+GACGSCPSSTMTMKMGLERRL + IPEISEVVQ++P+ P L+ E+V+ +L+G+RPFL VAGG I I+SLTG
Sbjct:  109 SDGGNVVISEIDGPVVKLELQGACGSCPSSTMTMKMGLERRLKEAIPEISEVVQAMPDSPPLTEESVDGILEGIRPFLQVAGGKIEIESLTG 200          
BLAST of mRNA_H-elongata_contig16550.4125.1 vs. uniprot
Match: A0A8J2S7I7_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S7I7_9STRA)

HSP 1 Score: 135 bits (340), Expect = 4.570e-38
Identity = 66/92 (71.74%), Postives = 80/92 (86.96%), Query Frame = 0
Query:    1 SNSGNVRVVEIDGPVVRLELEGACGSCPSSTMTMKMGLERRLVQRIPEISEVVQSIPNGPELSVENVEKVLDGVRPFLSVAGGSISIQSLTG 92
            S+ GNVRV  I+GPVVRL+LEGACG CPSSTMTMKMGLERRL + IPEISEVVQ +P+ P+++ E V++VLDGVRPFLSVAGGSI + S++G
Sbjct:   79 SDGGNVRVSGIEGPVVRLQLEGACGDCPSSTMTMKMGLERRLKEAIPEISEVVQVLPDAPDITEEAVDEVLDGVRPFLSVAGGSIDLVSVSG 170          
BLAST of mRNA_H-elongata_contig16550.4125.1 vs. uniprot
Match: A0A7S2K8U6_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K8U6_9STRA)

HSP 1 Score: 135 bits (341), Expect = 4.960e-38
Identity = 66/92 (71.74%), Postives = 77/92 (83.70%), Query Frame = 0
Query:    1 SNSGNVRVVEIDGPVVRLELEGACGSCPSSTMTMKMGLERRLVQRIPEISEVVQSIPNGPELSVENVEKVLDGVRPFLSVAGGSISIQSLTG 92
            ++ GNV +VEIDGPVV+LEL+G CG+CPSST TMKMGLER L +RIPEI EV+QSIP GPEL  E +E VL+GVRPFL VAGGSI I S+TG
Sbjct:   99 ADGGNVALVEIDGPVVKLELQGNCGTCPSSTQTMKMGLERGLKERIPEIQEVIQSIPEGPELCEEQIEVVLNGVRPFLQVAGGSIDIVSITG 190          
BLAST of mRNA_H-elongata_contig16550.4125.1 vs. uniprot
Match: F0Y565_AURAN (NifU domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y565_AURAN)

HSP 1 Score: 130 bits (328), Expect = 1.470e-37
Identity = 61/92 (66.30%), Postives = 80/92 (86.96%), Query Frame = 0
Query:    1 SNSGNVRVVEIDGPVVRLELEGACGSCPSSTMTMKMGLERRLVQRIPEISEVVQSIPNGPELSVENVEKVLDGVRPFLSVAGGSISIQSLTG 92
            S+ GNVR+  I+GPVV+LELEGACG+CPSSTMTMKMGLERRL + IPEIS+VVQ +P+ P++   +V++VL+GVRPFLSVAGG++ + SL+G
Sbjct:   23 SDGGNVRIAGIEGPVVKLELEGACGTCPSSTMTMKMGLERRLKEAIPEISDVVQYLPDTPDMDEASVDEVLEGVRPFLSVAGGTVDLVSLSG 114          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig16550.4125.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KSL7_9PHAE3.530e-5294.57NifU domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A835Z016_9STRA1.850e-4680.43NifU-like domain-containing protein n=1 Tax=Tribon... [more]
A0A7R9U202_9STRA2.190e-4175.00Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A4D9D2Y8_9STRA1.060e-4072.83NifU domain-containing protein n=1 Tax=Nannochloro... [more]
W7TNI1_9STRA2.780e-4071.74Nifu like protein n=1 Tax=Nannochloropsis gaditana... [more]
A0A7S1H4I0_9STRA2.050e-3970.65Hypothetical protein n=1 Tax=Thalassionema nitzsch... [more]
A0A7S2C848_9STRA3.220e-3870.65Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A8J2S7I7_9STRA4.570e-3871.74Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S2K8U6_9STRA4.960e-3871.74Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
F0Y565_AURAN1.470e-3766.30NifU domain-containing protein (Fragment) n=1 Tax=... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR034904Fe-S cluster assembly domain superfamilyGENE3D3.30.300.130coord: 1..58
e-value: 5.9E-20
score: 72.9
IPR034904Fe-S cluster assembly domain superfamilyGENE3D3.30.300.130coord: 61..92
e-value: 7.6E-8
score: 34.1
IPR034904Fe-S cluster assembly domain superfamilySUPERFAMILY117916Fe-S cluster assembly (FSCA) domain-likecoord: 2..56
IPR001075NIF system FeS cluster assembly, NifU, C-terminalPFAMPF01106NifUcoord: 3..53
e-value: 2.8E-17
score: 62.6
NoneNo IPR availablePANTHERPTHR11178IRON-SULFUR CLUSTER SCAFFOLD PROTEIN NFU-RELATEDcoord: 2..84
NoneNo IPR availablePANTHERPTHR11178:SF39NIFU-LIKE PROTEIN 2, CHLOROPLASTICcoord: 2..84
NoneNo IPR availablePRODOMPD002830coord: 1..54
e-value: 5.0E-17
score: 209.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig16550contigH-elongata_contig16550:5436..6197 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig16550.4125.1mRNA_H-elongata_contig16550.4125.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig16550 5436..6197 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig16550.4125.1 ID=prot_H-elongata_contig16550.4125.1|Name=mRNA_H-elongata_contig16550.4125.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=92bp
SNSGNVRVVEIDGPVVRLELEGACGSCPSSTMTMKMGLERRLVQRIPEIS
EVVQSIPNGPELSVENVEKVLDGVRPFLSVAGGSISIQSLTG
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR034904FSCA_dom_sf
IPR001075NIF_FeS_clus_asmbl_NifU_C