prot_H-elongata_contig16548.4123.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig16548.4123.1
Unique Nameprot_H-elongata_contig16548.4123.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length403
Homology
BLAST of mRNA_H-elongata_contig16548.4123.1 vs. uniprot
Match: D8LJF1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJF1_ECTSI)

HSP 1 Score: 548 bits (1411), Expect = 3.680e-177
Identity = 271/356 (76.12%), Postives = 306/356 (85.96%), Query Frame = 0
Query:   48 GFTMWALHESTAKPLSVVPTTAMELLDTYVVTVARRFPDDAGVQAIILRAGAGALGSLRTVIAAHVEAAVSSCPERGWDKLLRFLCATANDCRHLVDDAVPAVEERHPRAMTEGAEEAYETLKQLWMMLGVSCCRKAARLVLGFMDSDGLFALEGMHCPGAEQTLNEIREALEYYCVNFLRPWLEEYFYQKVLVRLCDHIVVWAVQGLVRAVVAGHPALDRVQLLRLATCRETLAEAMRTCAGLTSGSSGRDAGAEGGAGSGMYERRLGFLDDFLELIRVPSSDLEDLFTGMLRQHIRCQRSIQHALQVVLCLRMDGRAVPEAVSKWADEENWMGGDAVVLSADTAEVRFGFHRFF 403
            GF+MW LHESTAKPLSVVPTTA+ LLDTYVVTVA+RFPDDAGVQA+ILRAGAGALGSLR VI+AH EAAVS CPE+GWDKLLRFLCATANDC HLV +A+PA+EERHP+AM+EGAEE+YETLK+LW++LGVSCCRKAARLVLGFM++DGLFALEG+H  GAE+++ EIREALEYYC+NFLRPWLEEYFYQKVLVRLCDHIVVWA QGLVRA  AG P L   Q+LRLA CRETLAEA++TC+    G +G D         GMYERRL FLDD LEL+RVPS  LE +FTGML +HI CQRS+QHALQVVLCLR DG  VP  VSKWADE+NWMGGDA+VL+ADTAE+   FHR F
Sbjct: 1168 GFSMWTLHESTAKPLSVVPTTAIALLDTYVVTVAKRFPDDAGVQAVILRAGAGALGSLRNVISAHAEAAVSQCPEKGWDKLLRFLCATANDCWHLVSEALPAIEERHPQAMSEGAEESYETLKELWVLLGVSCCRKAARLVLGFMEADGLFALEGIHVAGAEESMVEIREALEYYCINFLRPWLEEYFYQKVLVRLCDHIVVWAAQGLVRAAAAGRPPLHSGQMLRLAACRETLAEALKTCSVRKGGDAG-DGXXXXXXXXGMYERRLAFLDDLLELLRVPSDQLEGVFTGMLGRHIHCQRSVQHALQVVLCLRADGSTVPGGVSKWADEDNWMGGDAIVLTADTAEIE-PFHRVF 1521          
BLAST of mRNA_H-elongata_contig16548.4123.1 vs. uniprot
Match: A0A6H5KJ77_9PHAE (C2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ77_9PHAE)

HSP 1 Score: 330 bits (846), Expect = 4.350e-98
Identity = 186/356 (52.25%), Postives = 216/356 (60.67%), Query Frame = 0
Query:   48 GFTMWALHESTAKPLSVVPTTAMELLDTYVVTVARRFPDDAGVQAIILRAGAGALGSLRTVIAAHVEAAVSSCPERGWDKLLRFLCATANDCRHLVDDAVPAVEERHPRAMTEGAEEAYETLKQLWMMLGVSCCRKAARLVLGFMDSDGLFALEGMHCPGAEQTLNEIREALEYYCVNFLRPWLEEYFYQKVLVRLCDHIVVWAVQGLVRAVVAGHPALDRVQLLRLATCRETLAEAMRTCAGLTSGSSGRDAGAEGGAGSGMYERRLGFLDDFLELIRVPSSDLEDLFTGMLRQHIRCQRSIQHALQVVLCLRMDGRAVPEAVSKWADEENWMGGDAVVLSADTAEVRFGFHRFF 403
            GF+MW LHESTAKPLSVVPTTA+ LLDTYVVTVA+RFPDDA VQA+ILRAGAGALGSLR VI+AH EAAVS CPE+GWDKLL+FLCATANDC HLV +A+PA++ERHP+AM+                              GFM++DGLFALEG+H  GAE+++ EIREALEYYC+NFLRPWLEEYFY+KV                     A   +LD                                                       +L  V       +FTGMLRQHI CQRS+QHALQVVLCLR DG  VP  VS+WADE+NWMGGDA+VL+AD AE+   FHR F
Sbjct: 1141 GFSMWTLHESTAKPLSVVPTTAIALLDTYVVTVAKRFPDDASVQAVILRAGAGALGSLRNVISAHAEAAVSQCPEKGWDKLLKFLCATANDCWHLVSEALPAIQERHPQAMS------------------------------GFMEADGLFALEGIHEAGAEESMVEIREALEYYCINFLRPWLEEYFYEKVF--------------------AAQQSLD------------------------------------------------------FDLTGVRG---RGVFTGMLRQHIHCQRSVQHALQVVLCLRADGSTVPVEVSEWADEDNWMGGDAIVLTADMAEIE-PFHRVF 1388          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig16548.4123.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LJF1_ECTSI3.680e-17776.12Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KJ77_9PHAE4.350e-9852.25C2 domain-containing protein n=1 Tax=Ectocarpus sp... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig16548contigH-elongata_contig16548:107..7441 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig16548.4123.1mRNA_H-elongata_contig16548.4123.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig16548 107..7441 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig16548.4123.1 ID=prot_H-elongata_contig16548.4123.1|Name=mRNA_H-elongata_contig16548.4123.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=403bp
DFPPETTTQPPDREEPAPKSPNLRAKLGIGGGGRGGAGTGKDVNRRQGFT
MWALHESTAKPLSVVPTTAMELLDTYVVTVARRFPDDAGVQAIILRAGAG
ALGSLRTVIAAHVEAAVSSCPERGWDKLLRFLCATANDCRHLVDDAVPAV
EERHPRAMTEGAEEAYETLKQLWMMLGVSCCRKAARLVLGFMDSDGLFAL
EGMHCPGAEQTLNEIREALEYYCVNFLRPWLEEYFYQKVLVRLCDHIVVW
AVQGLVRAVVAGHPALDRVQLLRLATCRETLAEAMRTCAGLTSGSSGRDA
GAEGGAGSGMYERRLGFLDDFLELIRVPSSDLEDLFTGMLRQHIRCQRSI
QHALQVVLCLRMDGRAVPEAVSKWADEENWMGGDAVVLSADTAEVRFGFH
RFF
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