mRNA_H-elongata_contig165343.4113.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig165343.4113.1 vs. uniprot
Match: D8LTQ6_ECTSI (5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTQ6_ECTSI) HSP 1 Score: 205 bits (522), Expect = 4.290e-59 Identity = 105/160 (65.62%), Postives = 124/160 (77.50%), Query Frame = 1
Query: 1 QSCPMLSAAVSVNLVTYFEDVGSEAYKWATSLPVGVLSLDFTRGDSLSLLKEHGFPADKVLGAGIIDGRSPWALEPTKAVSLVDEITSIV-----KHEAGLRMQASCPLQFVPWDVSCEEALTSAKAGGDVLSFAVQKVGEIVALAAALPAIAAGKQVSE 465
++CPMLSA V VNLVT+FEDVG+EAY+W T+LPV +SLDFTRGDSL L+K +GFP DKVLGAGIIDGRSPWA+EP K VSLV E+ S + +R+QASC LQFVPWDV+CE L K GGDVL+FAVQKV EIVALA A+P I AGK+ +
Sbjct: 237 KACPMLSADVKVNLVTFFEDVGAEAYQWVTALPVSAISLDFTRGDSLKLVKGYGFPKDKVLGAGIIDGRSPWAMEPAKVVSLVREVASAIMPANPNGSDNIRVQASCNLQFVPWDVTCEGDLAE-KVGGDVLAFAVQKVQEIVALAEAVPKITAGKEAKD 395
BLAST of mRNA_H-elongata_contig165343.4113.1 vs. uniprot
Match: A0A7S2US88_9STRA (5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2US88_9STRA) HSP 1 Score: 133 bits (335), Expect = 6.220e-34 Identity = 63/128 (49.22%), Postives = 97/128 (75.78%), Query Frame = 1
Query: 31 SVNLVTYFEDVGSEAYKWATSLP-VGVLSLDFTRGDSLSLLKEHGFPADKVLGAGIIDGRSPWALEPTKAVSLVDEITSIVKHEAGLRMQASCPLQFVPWDVSCEEALTSAKAGGDVLSFAVQKVGEI 411
S+N+V++FED+G++ YKW TS+ V V+SLDFTRG++L L+++ GFP++K+LGAGIIDGR+ W ++P A +++++++ A +R+Q S LQF+PWD+SCE+ + A G VLSF VQK+ EI
Sbjct: 237 SINMVSFFEDIGADNYKWLTSVDEVSVISLDFTRGENLDLVEKFGFPSNKILGAGIIDGRNVWKVDPAVAEVILEKLST---KTATIRIQPSASLQFIPWDLSCEKDIL-AHTAGQVLSFTVQKISEI 360
BLAST of mRNA_H-elongata_contig165343.4113.1 vs. uniprot
Match: A0A1C0VG24_9CYAN (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase n=5 Tax=Limnothrix TaxID=132605 RepID=A0A1C0VG24_9CYAN) HSP 1 Score: 134 bits (336), Expect = 2.260e-33 Identity = 72/140 (51.43%), Postives = 95/140 (67.86%), Query Frame = 1
Query: 13 MLSAAVSVNLVTYFEDVGSEAYKWATSLPVGVLSLDFTRGDSLSLLKEHGFPADKVLGAGIIDGRSPWALEPTKAVSLVDEITSIVKHEAGLRMQASCPLQFVPWDVSCEEALTSAKAGGDVLSFAVQKVGEIVALAAAL 432
+ +A + + LVTYF+D+G +AY W LPV +SLDFTRG++LSL+K HG P DKVLGAG++DGRS WA+EP + L+ E+ +I + LR+Q S LQFVP D +CE L DVLSFA QK+ E+V LA L
Sbjct: 223 LATAGLPIQLVTYFDDLG-DAYGWVMQLPVAGVSLDFTRGNNLSLVKAHGIPRDKVLGAGVVDGRSVWAIEPKGLLELLQELQAITPN---LRVQPSASLQFVPHDATCETQLPQPLR--DVLSFAEQKLTEVVLLAKGL 356
BLAST of mRNA_H-elongata_contig165343.4113.1 vs. uniprot
Match: Q2JXT0_SYNJA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase n=2 Tax=unclassified Synechococcus TaxID=2626047 RepID=Q2JXT0_SYNJA) HSP 1 Score: 129 bits (324), Expect = 9.560e-32 Identity = 67/140 (47.86%), Postives = 94/140 (67.14%), Query Frame = 1
Query: 13 MLSAAVSVNLVTYFEDVGSEAYKWATSLPVGVLSLDFTRGDSLSLLKEHGFPADKVLGAGIIDGRSPWALEPTKAVSLVDEITSIVKHEAGLRMQASCPLQFVPWDVSCEEALTSAKAGGDVLSFAVQKVGEIVALAAAL 432
+ S + ++LVTYF+D+G E Y WA LPV LSLDFTRG +L L++ HGFPADK+LGAG++DGR+ W ++P ++ + E+ ++ + LR+Q SC LQFVP D + E L +VLSFA QK+ E+V LA L
Sbjct: 223 LASVGIPLHLVTYFDDLG-ETYPWAVELPVAGLSLDFTRGHNLELVRAHGFPADKILGAGVVDGRNIWQIQPKAVLATLQELQALAPN---LRVQPSCSLQFVPHDAALETHLPEPLR--NVLSFAEQKLAEVVLLARTL 356
BLAST of mRNA_H-elongata_contig165343.4113.1 vs. uniprot
Match: K9Q5R3_9CYAN (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase n=1 Tax=Leptolyngbya sp. PCC 7376 TaxID=111781 RepID=K9Q5R3_9CYAN) HSP 1 Score: 126 bits (317), Expect = 8.500e-31 Identity = 71/140 (50.71%), Postives = 90/140 (64.29%), Query Frame = 1
Query: 13 MLSAAVSVNLVTYFEDVGSEAYKWATSLPVGVLSLDFTRGDSLSLLKEHGFPADKVLGAGIIDGRSPWALEPTKAVSLVDEITSIVKHEAGLRMQASCPLQFVPWDVSCEEALTSAKAGGDVLSFAVQKVGEIVALAAAL 432
+ V + LVTYF+D+G + Y W T+LPV +SLDFTRGD+L LL+ HGFPADKVLGAG+IDGR+ W +P + + EI +I +R+Q S LQFVP D E+ L G VLSFA QK+ EIV LA L
Sbjct: 223 LAKVGVPLQLVTYFDDLG-DTYNWVTALPVAGISLDFTRGDNLQLLQTHGFPADKVLGAGVIDGRNIWQCQPEDTLQRLKEIQAIA---TTVRVQPSASLQFVPHDAKLEKQLPQPLHG--VLSFAEQKLTEIVFLAQTL 356
BLAST of mRNA_H-elongata_contig165343.4113.1 vs. uniprot
Match: M4C1R5_HYAAE (5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4C1R5_HYAAE) HSP 1 Score: 126 bits (316), Expect = 1.180e-30 Identity = 63/133 (47.37%), Postives = 87/133 (65.41%), Query Frame = 1
Query: 25 AVSVNLVTYFEDVGSEAYKWATSLPVGVLSLDFTRGDSLSLLKEHGFPADKVLGAGIIDGRSPWALEPTKAVSLVDEITSIV--KHEAGLRMQASCPLQFVPWDVSCEEALTSAKAGG--DVLSFAVQKVGEI 411
A+++NLVTYFE++ S+ Y+W PV +SLDFTRGD+LS+L++ GFPA K LGAG+IDGRS W P ++ V EI ++ L +Q S LQ VP+ CEEAL + + G VLSFA +K+ E+
Sbjct: 238 AIALNLVTYFEEISSDVYQWFLHSPVAAISLDFTRGDNLSVLQKFGFPAGKRLGAGLIDGRSVWKFNPDTVLTQVKEIQKVLAASENTSLTVQTSSSLQHVPYTTGCEEALNAGETDGLLGVLSFAYEKLSEL 370
BLAST of mRNA_H-elongata_contig165343.4113.1 vs. uniprot
Match: A0A662YGR6_9STRA (5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YGR6_9STRA) HSP 1 Score: 125 bits (315), Expect = 1.760e-30 Identity = 63/134 (47.01%), Postives = 87/134 (64.93%), Query Frame = 1
Query: 22 AAVSVNLVTYFEDVGSEAYKWATSLPVGVLSLDFTRGDSLSLLKEHGFPADKVLGAGIIDGRSPWALEPTKAVSLVDEITSIV--KHEAGLRMQASCPLQFVPWDVSCEEALTSAKAGG--DVLSFAVQKVGEI 411
A++++NL TYFE++ Y+W PV +SLDFTRGD+LS+L++ GFPA K LGAG+IDGRS W PT +S V EI ++ A L +Q S LQ VP+ CE+AL + + G VLSFA +K+ E+
Sbjct: 1072 ASIAINLATYFEEINHAVYQWFAQSPVAAISLDFTRGDNLSVLQKFGFPAGKRLGAGLIDGRSVWKFNPTTVLSQVAEIKKVLAASENAELTVQTSSSLQHVPYTTECEKALNAGETDGLLGVLSFAYEKLAEL 1205
BLAST of mRNA_H-elongata_contig165343.4113.1 vs. uniprot
Match: G4YK03_PHYSP (5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase n=25 Tax=Peronosporaceae TaxID=4777 RepID=G4YK03_PHYSP) HSP 1 Score: 123 bits (309), Expect = 1.040e-29 Identity = 61/132 (46.21%), Postives = 87/132 (65.91%), Query Frame = 1
Query: 28 VSVNLVTYFEDVGSEAYKWATSLPVGVLSLDFTRGDSLSLLKEHGFPADKVLGAGIIDGRSPWALEPTKAVSLVDEITSIVKHEAG--LRMQASCPLQFVPWDVSCEEALTSAKAGG--DVLSFAVQKVGEI 411
VS+NL TYFE++ + Y+W + PV +SLDFTRGD+LS+++++GFPA K LGAG+IDGRS W P +S V EI ++ + L +Q S LQ VP+ CE+AL + + G VLSFA +K+ E+
Sbjct: 238 VSINLATYFEEINHDVYQWFATSPVSAISLDFTRGDNLSVIQKYGFPAGKRLGAGLIDGRSVWKFNPDTILSQVAEIKKVLANSENTELTIQTSSSLQHVPYTTECEKALNAGETDGLLGVLSFAYEKLAEL 369
BLAST of mRNA_H-elongata_contig165343.4113.1 vs. uniprot
Match: A0A024GBZ1_9STRA (5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase n=2 Tax=Albugo TaxID=65356 RepID=A0A024GBZ1_9STRA) HSP 1 Score: 123 bits (309), Expect = 1.040e-29 Identity = 61/134 (45.52%), Postives = 88/134 (65.67%), Query Frame = 1
Query: 22 AAVSVNLVTYFEDVGSEAYKWATSLPVGVLSLDFTRGDSLSLLKEHGFPADKVLGAGIIDGRSPWALEPTKAVSLVDEITSIV--KHEAGLRMQASCPLQFVPWDVSCEEALTSAKAGG--DVLSFAVQKVGEI 411
+A+SVNLVTYFE++ ++ Y+W V +SLDFTRGD+LS++++ GF K LGAG+IDGRS W P K +SL+ +I ++ K L +Q SC LQ VP+ CE++L + G VLSFA +K+ E+
Sbjct: 239 SAISVNLVTYFEEINADVYQWFLRSKVAAISLDFTRGDNLSIIRKFGFADGKCLGAGVIDGRSVWKFVPKKTLSLLHDILDVLQAKKNTSLSIQMSCSLQHVPYTTKCEQSLENGDIKGLLGVLSFAYEKLSEM 372
BLAST of mRNA_H-elongata_contig165343.4113.1 vs. uniprot
Match: A0A6I5RAP4_9CYAN (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase n=1 Tax=Leptolyngbya sp. SIO1E4 TaxID=2607768 RepID=A0A6I5RAP4_9CYAN) HSP 1 Score: 123 bits (308), Expect = 1.400e-29 Identity = 65/140 (46.43%), Postives = 90/140 (64.29%), Query Frame = 1
Query: 13 MLSAAVSVNLVTYFEDVGSEAYKWATSLPVGVLSLDFTRGDSLSLLKEHGFPADKVLGAGIIDGRSPWALEPTKAVSLVDEITSIVKHEAGLRMQASCPLQFVPWDVSCEEALTSAKAGGDVLSFAVQKVGEIVALAAAL 432
+ + + LVTYF+D+G +AY+W T LPV +SLD TRG +L L+K HGFPADK LGAG++DGR+ W + P ++ + E+ +I + LR+Q S LQFVP D + E L VLSFA QK+ E+V LA +L
Sbjct: 223 LAEVGLPIQLVTYFDDLG-DAYRWVTQLPVAGISLDLTRGKNLELVKAHGFPADKTLGAGVVDGRNVWKIRPNAVLATLQELQAIAPN---LRVQPSASLQFVPHDAALETQLPGPLR--TVLSFAEQKLAEVVFLALSL 356 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig165343.4113.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig165343.4113.1 >prot_H-elongata_contig165343.4113.1 ID=prot_H-elongata_contig165343.4113.1|Name=mRNA_H-elongata_contig165343.4113.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=155bp MLSAAVSVNLVTYFEDVGSEAYKWATSLPVGVLSLDFTRGDSLSLLKEHGback to top mRNA from alignment at H-elongata_contig165343:88..1288+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig165343.4113.1 ID=mRNA_H-elongata_contig165343.4113.1|Name=mRNA_H-elongata_contig165343.4113.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1201bp|location=Sequence derived from alignment at H-elongata_contig165343:88..1288+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig165343:88..1288+ >mRNA_H-elongata_contig165343.4113.1 ID=mRNA_H-elongata_contig165343.4113.1|Name=mRNA_H-elongata_contig165343.4113.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=930bp|location=Sequence derived from alignment at H-elongata_contig165343:88..1288+ (Himanthalia elongata Himel1 dioecious)back to top |