prot_H-elongata_contig165286.4110.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig165286.4110.1
Unique Nameprot_H-elongata_contig165286.4110.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length308
Homology
[Close]
BLAST of mRNA_H-elongata_contig165286.4110.1 vs. uniprot
Match: A0A6H5L6A0_9PHAE (SAP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6A0_9PHAE)

HSP 1 Score: 58.9 bits (141), Expect = 9.040e-7
Identity = 29/38 (76.32%), Postives = 33/38 (86.84%), Query Frame = 0 
Query:  263 SKSGLMKLTVKNLREHCKEAGVPTTGTKADLVKRLLES 300
            SK GLMKLTVK+LRE CK AGVPT+G KAD+V RLL+S
Sbjct:  151 SKEGLMKLTVKDLRERCKAAGVPTSGRKADIVDRLLDS 188
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig165286.4110.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L6A0_9PHAE9.040e-776.32SAP domain-containing protein n=1 Tax=Ectocarpus s... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 124..159
NoneNo IPR availableCOILSCoilCoilcoord: 7..91
IPR003034SAP domainSMARTSM00513sap_9coord: 267..301
e-value: 6.1E-9
score: 45.7
IPR003034SAP domainPFAMPF02037SAPcoord: 267..300
e-value: 3.8E-10
score: 39.3
IPR003034SAP domainPROSITEPS50800SAPcoord: 267..301
score: 11.804
IPR036361SAP domain superfamilyGENE3D1.10.720.30coord: 249..303
e-value: 2.6E-10
score: 41.7
IPR036361SAP domain superfamilySUPERFAMILY68906SAP domaincoord: 263..300

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig165286contigH-elongata_contig165286:482..1405 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig165286.4110.1mRNA_H-elongata_contig165286.4110.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig165286 482..1405 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig165286.4110.1 ID=prot_H-elongata_contig165286.4110.1|Name=mRNA_H-elongata_contig165286.4110.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=308bp
KALAEASEILEGRVREYEGRLTALTRENDYLRKDYGAEIERMEAERVATR
DRVSNLEASLSRAEFRADEQREALERELALMAGELDRRSEELAAATATTD
GLRGAIDSIKAKAEAQEAAQKAFVAAAEMQRREQEEEERAVAEENARALE
NDTEDREEATARALQKSEIVKEKDEKKAERGVMQKNRGVRAPTREKNARE
QARPRAARTKSKAASPAASESEQPRKPAPAARAGTEMPQVATAGTGSGTA
ARGSRAENTLPKSKSGLMKLTVKNLREHCKEAGVPTTGTKADLVKRLLES
LGVDMIR*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003034SAP_dom
IPR036361SAP_dom_sf